Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2XD0:V32:V33
Extra
PDB:
ATOM 1 O3' U A 31 -16.322 9.529 -13.932 1.00 91.32 O
ATOM 2 P A A 32 -17.531 8.964 -14.827 1.00104.15 P
ATOM 3 OP1 A A 32 -17.379 9.649 -16.134 1.00 91.98 O
ATOM 4 OP2 A A 32 -18.815 9.088 -14.095 1.00 98.34 O
ATOM 5 O5' A A 32 -17.120 7.439 -14.913 1.00 91.16 O
ATOM 6 C5' A A 32 -15.781 7.148 -15.291 1.00 83.52 C
ATOM 7 C4' A A 32 -15.542 5.665 -15.415 1.00 82.48 C
ATOM 8 O4' A A 32 -15.202 5.117 -14.113 1.00 82.30 O
ATOM 9 C3' A A 32 -16.743 4.870 -15.911 1.00 88.80 C
ATOM 10 O3' A A 32 -16.288 3.743 -16.661 1.00 96.59 O
ATOM 11 C2' A A 32 -17.371 4.405 -14.606 1.00 90.34 C
ATOM 12 O2' A A 32 -18.221 3.285 -14.718 1.00100.55 O
ATOM 13 C1' A A 32 -16.125 4.100 -13.783 1.00 82.43 C
ATOM 14 N9 A A 32 -16.362 4.095 -12.337 1.00 83.00 N
ATOM 15 C8 A A 32 -16.605 5.143 -11.485 1.00 83.47 C
ATOM 16 N7 A A 32 -16.792 4.774 -10.242 1.00 84.19 N
ATOM 17 C5 A A 32 -16.674 3.393 -10.285 1.00 84.37 C
ATOM 18 C6 A A 32 -16.767 2.401 -9.300 1.00 85.32 C
ATOM 19 N6 A A 32 -17.017 2.637 -8.013 1.00 86.19 N
ATOM 20 N1 A A 32 -16.593 1.125 -9.696 1.00 85.27 N
ATOM 21 C2 A A 32 -16.338 0.864 -10.986 1.00 84.26 C
ATOM 22 N3 A A 32 -16.226 1.704 -12.006 1.00 83.42 N
ATOM 23 C4 A A 32 -16.408 2.963 -11.572 1.00 83.47 C
ATOM 24 P G A 33 -16.207 3.810 -18.268 1.00 93.07 P
ATOM 25 OP1 G A 33 -17.454 4.507 -18.668 1.00107.72 O
ATOM 26 OP2 G A 33 -15.834 2.470 -18.777 1.00 84.95 O
ATOM 27 O5' G A 33 -14.999 4.788 -18.524 1.00 85.38 O
TER
ATOM 1 O3' A B 32 -16.288 3.743 -16.661 1.00 96.59 O
ATOM 2 P G B 33 -16.207 3.810 -18.268 1.00 93.07 P
ATOM 3 OP1 G B 33 -17.454 4.507 -18.668 1.00107.72 O
ATOM 4 OP2 G B 33 -15.834 2.470 -18.777 1.00 84.95 O
ATOM 5 O5' G B 33 -14.999 4.788 -18.524 1.00 85.38 O
ATOM 6 C5' G B 33 -13.970 4.498 -19.453 1.00 76.92 C
ATOM 7 C4' G B 33 -13.201 5.761 -19.708 1.00 77.34 C
ATOM 8 O4' G B 33 -13.264 6.570 -18.504 1.00 77.66 O
ATOM 9 C3' G B 33 -11.727 5.577 -20.037 1.00 75.53 C
ATOM 10 O3' G B 33 -11.321 6.562 -20.979 1.00 76.80 O
ATOM 11 C2' G B 33 -11.030 5.865 -18.717 1.00 74.06 C
ATOM 12 O2' G B 33 -9.735 6.394 -18.889 1.00 73.27 O
ATOM 13 C1' G B 33 -11.957 6.899 -18.086 1.00 75.81 C
ATOM 14 N9 G B 33 -11.901 6.992 -16.616 1.00 74.85 N
ATOM 15 C8 G B 33 -11.638 8.169 -15.964 1.00 75.34 C
ATOM 16 N7 G B 33 -11.617 8.071 -14.676 1.00 74.40 N
ATOM 17 C5 G B 33 -11.884 6.737 -14.444 1.00 73.26 C
ATOM 18 C6 G B 33 -11.987 6.058 -13.204 1.00 72.08 C
ATOM 19 O6 G B 33 -11.860 6.523 -12.063 1.00 71.78 O
ATOM 20 N1 G B 33 -12.267 4.709 -13.366 1.00 71.30 N
ATOM 21 C2 G B 33 -12.429 4.091 -14.572 1.00 71.58 C
ATOM 22 N2 G B 33 -12.694 2.777 -14.482 1.00 70.77 N
ATOM 23 N3 G B 33 -12.333 4.719 -15.741 1.00 72.65 N
ATOM 24 C4 G B 33 -12.059 6.039 -15.619 1.00 73.48 C
ATOM 25 P A B 34 -11.027 6.161 -22.499 1.00 77.21 P
ATOM 26 OP1 A B 34 -12.283 5.552 -23.000 1.00 78.49 O
ATOM 27 OP2 A B 34 -10.510 7.415 -23.118 1.00 78.58 O
ATOM 28 O5' A B 34 -9.888 5.046 -22.377 1.00 74.55 O
TER
ATOM 2 P A A 32 -17.531 8.964 -14.827 1.00104.15 P
ATOM 3 OP1 A A 32 -17.379 9.649 -16.134 1.00 91.98 O
ATOM 4 OP2 A A 32 -18.815 9.088 -14.095 1.00 98.34 O
ATOM 5 O5' A A 32 -17.120 7.439 -14.913 1.00 91.16 O
ATOM 6 C5' A A 32 -15.781 7.148 -15.291 1.00 83.52 C
ATOM 7 C4' A A 32 -15.542 5.665 -15.415 1.00 82.48 C
ATOM 8 O4' A A 32 -15.202 5.117 -14.113 1.00 82.30 O
ATOM 9 C3' A A 32 -16.743 4.870 -15.911 1.00 88.80 C
ATOM 10 O3' A A 32 -16.288 3.743 -16.661 1.00 96.59 O
ATOM 11 C2' A A 32 -17.371 4.405 -14.606 1.00 90.34 C
ATOM 12 O2' A A 32 -18.221 3.285 -14.718 1.00100.55 O
ATOM 13 C1' A A 32 -16.125 4.100 -13.783 1.00 82.43 C
ATOM 14 N9 A A 32 -16.362 4.095 -12.337 1.00 83.00 N
ATOM 15 C8 A A 32 -16.605 5.143 -11.485 1.00 83.47 C
ATOM 16 N7 A A 32 -16.792 4.774 -10.242 1.00 84.19 N
ATOM 17 C5 A A 32 -16.674 3.393 -10.285 1.00 84.37 C
ATOM 18 C6 A A 32 -16.767 2.401 -9.300 1.00 85.32 C
ATOM 19 N6 A A 32 -17.017 2.637 -8.013 1.00 86.19 N
ATOM 20 N1 A A 32 -16.593 1.125 -9.696 1.00 85.27 N
ATOM 21 C2 A A 32 -16.338 0.864 -10.986 1.00 84.26 C
ATOM 22 N3 A A 32 -16.226 1.704 -12.006 1.00 83.42 N
ATOM 23 C4 A A 32 -16.408 2.963 -11.572 1.00 83.47 C
ATOM 24 P G A 33 -16.207 3.810 -18.268 1.00 93.07 P
ATOM 25 OP1 G A 33 -17.454 4.507 -18.668 1.00107.72 O
ATOM 26 OP2 G A 33 -15.834 2.470 -18.777 1.00 84.95 O
ATOM 27 O5' G A 33 -14.999 4.788 -18.524 1.00 85.38 O
TER
ATOM 1 O3' A B 32 -16.288 3.743 -16.661 1.00 96.59 O
ATOM 2 P G B 33 -16.207 3.810 -18.268 1.00 93.07 P
ATOM 3 OP1 G B 33 -17.454 4.507 -18.668 1.00107.72 O
ATOM 4 OP2 G B 33 -15.834 2.470 -18.777 1.00 84.95 O
ATOM 5 O5' G B 33 -14.999 4.788 -18.524 1.00 85.38 O
ATOM 6 C5' G B 33 -13.970 4.498 -19.453 1.00 76.92 C
ATOM 7 C4' G B 33 -13.201 5.761 -19.708 1.00 77.34 C
ATOM 8 O4' G B 33 -13.264 6.570 -18.504 1.00 77.66 O
ATOM 9 C3' G B 33 -11.727 5.577 -20.037 1.00 75.53 C
ATOM 10 O3' G B 33 -11.321 6.562 -20.979 1.00 76.80 O
ATOM 11 C2' G B 33 -11.030 5.865 -18.717 1.00 74.06 C
ATOM 12 O2' G B 33 -9.735 6.394 -18.889 1.00 73.27 O
ATOM 13 C1' G B 33 -11.957 6.899 -18.086 1.00 75.81 C
ATOM 14 N9 G B 33 -11.901 6.992 -16.616 1.00 74.85 N
ATOM 15 C8 G B 33 -11.638 8.169 -15.964 1.00 75.34 C
ATOM 16 N7 G B 33 -11.617 8.071 -14.676 1.00 74.40 N
ATOM 17 C5 G B 33 -11.884 6.737 -14.444 1.00 73.26 C
ATOM 18 C6 G B 33 -11.987 6.058 -13.204 1.00 72.08 C
ATOM 19 O6 G B 33 -11.860 6.523 -12.063 1.00 71.78 O
ATOM 20 N1 G B 33 -12.267 4.709 -13.366 1.00 71.30 N
ATOM 21 C2 G B 33 -12.429 4.091 -14.572 1.00 71.58 C
ATOM 22 N2 G B 33 -12.694 2.777 -14.482 1.00 70.77 N
ATOM 23 N3 G B 33 -12.333 4.719 -15.741 1.00 72.65 N
ATOM 24 C4 G B 33 -12.059 6.039 -15.619 1.00 73.48 C
ATOM 25 P A B 34 -11.027 6.161 -22.499 1.00 77.21 P
ATOM 26 OP1 A B 34 -12.283 5.552 -23.000 1.00 78.49 O
ATOM 27 OP2 A B 34 -10.510 7.415 -23.118 1.00 78.58 O
ATOM 28 O5' A B 34 -9.888 5.046 -22.377 1.00 74.55 O
TER
Atoms:
OP1: (-17.379,9.649,-16.134)
OP2: (-18.815,9.088,-14.095)
C3': (-16.743,4.870,-15.911)
C1': (-16.125,4.100,-13.783)
C5': (-15.781,7.148,-15.291)
O4': (-15.202,5.117,-14.113)
C8: (-16.605,5.143,-11.485)
O2': (-18.221,3.285,-14.718)
C6: (-16.767,2.401,-9.300)
C5: (-16.674,3.393,-10.285)
C4: (-16.408,2.963,-11.572)
P: (-17.531,8.964,-14.827)
C4': (-15.542,5.665,-15.415)
C2': (-17.371,4.405,-14.606)
C2: (-16.338,0.864,-10.986)
N1: (-16.593,1.125,-9.696)
N3: (-16.226,1.704,-12.006)
N6: (-17.017,2.637,-8.013)
N7: (-16.792,4.774,-10.242)
N9: (-16.362,4.095,-12.337)
O5': (-17.120,7.439,-14.913)
O3': (-16.288,3.743,-16.661)
OP2: (-18.815,9.088,-14.095)
C3': (-16.743,4.870,-15.911)
C1': (-16.125,4.100,-13.783)
C5': (-15.781,7.148,-15.291)
O4': (-15.202,5.117,-14.113)
C8: (-16.605,5.143,-11.485)
O2': (-18.221,3.285,-14.718)
C6: (-16.767,2.401,-9.300)
C5: (-16.674,3.393,-10.285)
C4: (-16.408,2.963,-11.572)
P: (-17.531,8.964,-14.827)
C4': (-15.542,5.665,-15.415)
C2': (-17.371,4.405,-14.606)
C2: (-16.338,0.864,-10.986)
N1: (-16.593,1.125,-9.696)
N3: (-16.226,1.704,-12.006)
N6: (-17.017,2.637,-8.013)
N7: (-16.792,4.774,-10.242)
N9: (-16.362,4.095,-12.337)
O5': (-17.120,7.439,-14.913)
O3': (-16.288,3.743,-16.661)
OP1: (-17.454,4.507,-18.668)
OP2: (-15.834,2.470,-18.777)
C3': (-11.727,5.577,-20.037)
C1': (-11.957,6.899,-18.086)
C5': (-13.970,4.498,-19.453)
O6: (-11.860,6.523,-12.063)
O4': (-13.264,6.570,-18.504)
C8: (-11.638,8.169,-15.964)
C2: (-12.429,4.091,-14.572)
C6: (-11.987,6.058,-13.204)
C5: (-11.884,6.737,-14.444)
C4: (-12.059,6.039,-15.619)
P: (-16.207,3.810,-18.268)
C4': (-13.201,5.761,-19.708)
C2': (-11.030,5.865,-18.717)
O2': (-9.735,6.394,-18.889)
N1: (-12.267,4.709,-13.366)
N2: (-12.694,2.777,-14.482)
N3: (-12.333,4.719,-15.741)
N7: (-11.617,8.071,-14.676)
N9: (-11.901,6.992,-16.616)
O5': (-14.999,4.788,-18.524)
O3': (-11.321,6.562,-20.979)
OP2: (-15.834,2.470,-18.777)
C3': (-11.727,5.577,-20.037)
C1': (-11.957,6.899,-18.086)
C5': (-13.970,4.498,-19.453)
O6: (-11.860,6.523,-12.063)
O4': (-13.264,6.570,-18.504)
C8: (-11.638,8.169,-15.964)
C2: (-12.429,4.091,-14.572)
C6: (-11.987,6.058,-13.204)
C5: (-11.884,6.737,-14.444)
C4: (-12.059,6.039,-15.619)
P: (-16.207,3.810,-18.268)
C4': (-13.201,5.761,-19.708)
C2': (-11.030,5.865,-18.717)
O2': (-9.735,6.394,-18.889)
N1: (-12.267,4.709,-13.366)
N2: (-12.694,2.777,-14.482)
N3: (-12.333,4.719,-15.741)
N7: (-11.617,8.071,-14.676)
N9: (-11.901,6.992,-16.616)
O5': (-14.999,4.788,-18.524)
O3': (-11.321,6.562,-20.979)
Image (generated by PyMOL):