ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2XD0:G32:G33

Extra

PDB:
ATOM 1 O3' U A 31 10.646 -29.123 78.174 1.00 50.46 O
ATOM 2 P A A 32 11.986 -29.074 77.300 1.00 57.91 P
ATOM 3 OP1 A A 32 12.265 -30.448 76.824 1.00 47.62 O
ATOM 4 OP2 A A 32 12.972 -28.347 78.122 1.00 47.57 O
ATOM 5 O5' A A 32 11.553 -28.183 76.069 1.00 44.49 O
ATOM 6 C5' A A 32 10.322 -28.456 75.414 1.00 40.72 C
ATOM 7 C4' A A 32 10.428 -28.232 73.934 1.00 41.10 C
ATOM 8 O4' A A 32 9.842 -26.939 73.662 1.00 44.37 O
ATOM 9 C3' A A 32 11.867 -28.178 73.456 1.00 43.15 C
ATOM 10 O3' A A 32 12.176 -29.159 72.459 1.00 51.51 O
ATOM 11 C2' A A 32 12.134 -26.723 73.049 1.00 45.92 C
ATOM 12 O2' A A 32 12.698 -26.543 71.763 1.00 56.23 O
ATOM 13 C1' A A 32 10.778 -26.044 73.097 1.00 44.28 C
ATOM 14 N9 A A 32 10.851 -24.905 74.013 1.00 40.57 N
ATOM 15 C8 A A 32 10.944 -24.986 75.385 1.00 43.57 C
ATOM 16 N7 A A 32 11.009 -23.823 76.010 1.00 44.51 N
ATOM 17 C5 A A 32 10.954 -22.920 74.965 1.00 41.16 C
ATOM 18 C6 A A 32 10.985 -21.541 74.980 1.00 52.41 C
ATOM 19 N6 A A 32 11.081 -20.858 76.109 1.00 57.34 N
ATOM 20 N1 A A 32 10.923 -20.908 73.803 1.00 58.07 N
ATOM 21 C2 A A 32 10.841 -21.644 72.694 1.00 53.89 C
ATOM 22 N3 A A 32 10.804 -22.959 72.541 1.00 48.63 N
ATOM 23 C4 A A 32 10.867 -23.553 73.735 1.00 43.10 C
ATOM 24 P G A 33 11.714 -29.414 70.953 1.00 48.41 P
ATOM 25 OP1 G A 33 13.003 -29.793 70.332 1.00 59.48 O
ATOM 26 OP2 G A 33 10.884 -28.343 70.362 1.00 41.63 O
ATOM 27 O5' G A 33 10.846 -30.709 71.200 1.00 45.97 O
TER

ATOM 1 O3' A B 32 12.176 -29.159 72.459 1.00 51.51 O
ATOM 2 P G B 33 11.714 -29.414 70.953 1.00 48.41 P
ATOM 3 OP1 G B 33 13.003 -29.793 70.332 1.00 59.48 O
ATOM 4 OP2 G B 33 10.884 -28.343 70.362 1.00 41.63 O
ATOM 5 O5' G B 33 10.846 -30.709 71.200 1.00 45.97 O
ATOM 6 C5' G B 33 9.679 -30.974 70.435 1.00 36.99 C
ATOM 7 C4' G B 33 8.787 -31.918 71.191 1.00 38.45 C
ATOM 8 O4' G B 33 8.523 -31.366 72.512 1.00 43.73 O
ATOM 9 C3' G B 33 7.432 -32.173 70.555 1.00 36.88 C
ATOM 10 O3' G B 33 7.006 -33.490 70.893 1.00 38.72 O
ATOM 11 C2' G B 33 6.569 -31.154 71.287 1.00 32.96 C
ATOM 12 O2' G B 33 5.183 -31.420 71.257 1.00 34.21 O
ATOM 13 C1' G B 33 7.131 -31.253 72.694 1.00 35.75 C
ATOM 14 N9 G B 33 6.845 -30.103 73.548 1.00 35.48 N
ATOM 15 C8 G B 33 6.330 -30.177 74.809 1.00 32.58 C
ATOM 16 N7 G B 33 6.165 -29.013 75.374 1.00 30.72 N
ATOM 17 C5 G B 33 6.595 -28.111 74.429 1.00 30.25 C
ATOM 18 C6 G B 33 6.651 -26.700 74.491 1.00 30.34 C
ATOM 19 O6 G B 33 6.307 -25.958 75.424 1.00 32.66 O
ATOM 20 N1 G B 33 7.152 -26.144 73.338 1.00 32.29 N
ATOM 21 C2 G B 33 7.539 -26.881 72.272 1.00 37.97 C
ATOM 22 N2 G B 33 7.999 -26.173 71.241 1.00 37.80 N
ATOM 23 N3 G B 33 7.495 -28.198 72.196 1.00 31.75 N
ATOM 24 C4 G B 33 7.010 -28.760 73.303 1.00 32.48 C
ATOM 25 P A B 34 7.091 -34.601 69.771 1.00 40.40 P
ATOM 26 OP1 A B 34 8.446 -34.390 69.223 1.00 43.45 O
ATOM 27 OP2 A B 34 6.684 -35.922 70.301 1.00 36.94 O
ATOM 28 O5' A B 34 6.012 -34.036 68.766 1.00 35.75 O
TER

Atoms:
OP1: (12.265,-30.448,76.824)
OP2: (12.972,-28.347,78.122)
C3': (11.867,-28.178,73.456)
C1': (10.778,-26.044,73.097)
C5': (10.322,-28.456,75.414)
O4': (9.842,-26.939,73.662)
C8: (10.944,-24.986,75.385)
O2': (12.698,-26.543,71.763)
C6: (10.985,-21.541,74.980)
C5: (10.954,-22.920,74.965)
C4: (10.867,-23.553,73.735)
P: (11.986,-29.074,77.300)
C4': (10.428,-28.232,73.934)
C2': (12.134,-26.723,73.049)
C2: (10.841,-21.644,72.694)
N1: (10.923,-20.908,73.803)
N3: (10.804,-22.959,72.541)
N6: (11.081,-20.858,76.109)
N7: (11.009,-23.823,76.010)
N9: (10.851,-24.905,74.013)
O5': (11.553,-28.183,76.069)
O3': (12.176,-29.159,72.459)
OP1: (13.003,-29.793,70.332)
OP2: (10.884,-28.343,70.362)
C3': (7.432,-32.173,70.555)
C1': (7.131,-31.253,72.694)
C5': (9.679,-30.974,70.435)
O6: (6.307,-25.958,75.424)
O4': (8.523,-31.366,72.512)
C8: (6.330,-30.177,74.809)
C2: (7.539,-26.881,72.272)
C6: (6.651,-26.700,74.491)
C5: (6.595,-28.111,74.429)
C4: (7.010,-28.760,73.303)
P: (11.714,-29.414,70.953)
C4': (8.787,-31.918,71.191)
C2': (6.569,-31.154,71.287)
O2': (5.183,-31.420,71.257)
N1: (7.152,-26.144,73.338)
N2: (7.999,-26.173,71.241)
N3: (7.495,-28.198,72.196)
N7: (6.165,-29.013,75.374)
N9: (6.845,-30.103,73.548)
O5': (10.846,-30.709,71.200)
O3': (7.006,-33.490,70.893)
Image (generated by PyMOL):
PyMOL image
show in jmol