ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1MJI:D14:D18

Extra

PDB:
ATOM 1 O3' A A 13 10.149 -15.252 28.864 1.00 22.72 O
ATOM 2 P U A 14 11.048 -15.835 30.071 1.00 21.72 P
ATOM 3 OP1 U A 14 12.205 -16.546 29.470 1.00 22.92 O
ATOM 4 OP2 U A 14 10.162 -16.539 31.023 1.00 18.96 O
ATOM 5 O5' U A 14 11.637 -14.562 30.827 1.00 22.04 O
ATOM 6 C5' U A 14 12.527 -13.627 30.204 1.00 19.65 C
ATOM 7 C4' U A 14 12.697 -12.466 31.139 1.00 19.63 C
ATOM 8 O4' U A 14 11.362 -12.111 31.527 1.00 20.41 O
ATOM 9 C3' U A 14 13.446 -12.870 32.405 1.00 21.69 C
ATOM 10 O3' U A 14 14.595 -12.027 32.560 1.00 27.56 O
ATOM 11 C2' U A 14 12.541 -12.464 33.574 1.00 22.50 C
ATOM 12 O2' U A 14 13.141 -11.555 34.475 1.00 27.73 O
ATOM 13 C1' U A 14 11.332 -11.815 32.890 1.00 22.03 C
ATOM 14 N1 U A 14 10.007 -12.131 33.444 1.00 20.13 N
ATOM 15 C2 U A 14 9.353 -11.101 34.113 1.00 20.51 C
ATOM 16 O2 U A 14 9.808 -9.972 34.185 1.00 21.06 O
ATOM 17 N3 U A 14 8.151 -11.445 34.689 1.00 20.70 N
ATOM 18 C4 U A 14 7.544 -12.688 34.660 1.00 21.91 C
ATOM 19 O4 U A 14 6.482 -12.856 35.267 1.00 22.04 O
ATOM 20 C5 U A 14 8.269 -13.694 33.920 1.00 19.85 C
ATOM 21 C6 U A 14 9.442 -13.385 33.348 1.00 19.24 C
ATOM 22 P G A 15 15.990 -12.344 31.834 1.00 31.01 P
ATOM 23 OP1 G A 15 16.879 -11.240 32.259 1.00 29.78 O
ATOM 24 OP2 G A 15 15.768 -12.596 30.385 1.00 32.41 O
ATOM 25 O5' G A 15 16.509 -13.688 32.505 1.00 34.80 O
TER

ATOM 1 O3' C B 17 8.366 -7.300 36.943 1.00 17.32 O
ATOM 2 P G B 18 7.045 -7.921 36.291 1.00 14.54 P
ATOM 3 OP1 G B 18 5.947 -7.665 37.248 1.00 13.62 O
ATOM 4 OP2 G B 18 7.346 -9.304 35.856 1.00 19.25 O
ATOM 5 O5' G B 18 6.757 -7.004 35.031 1.00 13.92 O
ATOM 6 C5' G B 18 7.651 -6.901 33.933 1.00 15.87 C
ATOM 7 C4' G B 18 6.892 -6.306 32.783 1.00 17.68 C
ATOM 8 O4' G B 18 5.870 -7.237 32.434 1.00 20.03 O
ATOM 9 C3' G B 18 6.195 -4.998 33.156 1.00 18.99 C
ATOM 10 O3' G B 18 6.898 -4.039 32.383 1.00 17.26 O
ATOM 11 C2' G B 18 4.746 -5.122 32.650 1.00 20.30 C
ATOM 12 O2' G B 18 4.383 -4.243 31.599 1.00 30.11 O
ATOM 13 C1' G B 18 4.703 -6.545 32.105 1.00 19.06 C
ATOM 14 N9 G B 18 3.574 -7.420 32.362 1.00 18.32 N
ATOM 15 C8 G B 18 2.629 -7.386 33.353 1.00 17.15 C
ATOM 16 N7 G B 18 1.773 -8.370 33.264 1.00 19.42 N
ATOM 17 C5 G B 18 2.188 -9.081 32.145 1.00 18.58 C
ATOM 18 C6 G B 18 1.668 -10.251 31.546 1.00 18.31 C
ATOM 19 O6 G B 18 0.699 -10.926 31.892 1.00 22.86 O
ATOM 20 N1 G B 18 2.409 -10.623 30.426 1.00 17.91 N
ATOM 21 C2 G B 18 3.515 -9.954 29.946 1.00 14.99 C
ATOM 22 N2 G B 18 4.110 -10.461 28.864 1.00 11.84 N
ATOM 23 N3 G B 18 3.999 -8.871 30.495 1.00 15.16 N
ATOM 24 C4 G B 18 3.292 -8.496 31.582 1.00 17.96 C
ATOM 25 P A B 19 7.114 -2.546 32.898 1.00 17.80 P
ATOM 26 OP1 A B 19 7.094 -2.533 34.378 1.00 18.31 O
ATOM 27 OP2 A B 19 6.181 -1.666 32.145 1.00 17.69 O
ATOM 28 O5' A B 19 8.605 -2.308 32.390 1.00 17.52 O
TER

Atoms:
C4: (7.544,-12.688,34.660)
N3: (8.151,-11.445,34.689)
OP1: (12.205,-16.546,29.470)
OP2: (10.162,-16.539,31.023)
C2: (9.353,-11.101,34.113)
C1': (11.332,-11.815,32.890)
C3': (13.446,-12.870,32.405)
O5': (11.637,-14.562,30.827)
O4': (11.362,-12.111,31.527)
C5': (12.527,-13.627,30.204)
P: (11.048,-15.835,30.071)
C4': (12.697,-12.466,31.139)
C2': (12.541,-12.464,33.574)
O2': (13.141,-11.555,34.475)
N1: (10.007,-12.131,33.444)
O4: (6.482,-12.856,35.267)
O2: (9.808,-9.972,34.185)
C6: (9.442,-13.385,33.348)
C5: (8.269,-13.694,33.920)
O3': (14.595,-12.027,32.560)
OP1: (5.947,-7.665,37.248)
OP2: (7.346,-9.304,35.856)
C3': (6.195,-4.998,33.156)
C1': (4.703,-6.545,32.105)
C5': (7.651,-6.901,33.933)
O6: (0.699,-10.926,31.892)
O4': (5.870,-7.237,32.434)
C8: (2.629,-7.386,33.353)
C2: (3.515,-9.954,29.946)
C6: (1.668,-10.251,31.546)
C5: (2.188,-9.081,32.145)
C4: (3.292,-8.496,31.582)
P: (7.045,-7.921,36.291)
C4': (6.892,-6.306,32.783)
C2': (4.746,-5.122,32.650)
O2': (4.383,-4.243,31.599)
N1: (2.409,-10.623,30.426)
N2: (4.110,-10.461,28.864)
N3: (3.999,-8.871,30.495)
N7: (1.773,-8.370,33.264)
N9: (3.574,-7.420,32.362)
O5': (6.757,-7.004,35.031)
O3': (6.898,-4.039,32.383)
Image (generated by PyMOL):
PyMOL image
show in jmol