Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2DU3:D58:D17
Extra
PDB:
ATOM 1 O3' A A 57 15.192 61.697 -52.735 1.00117.61 O
ATOM 2 P U A 58 15.117 62.591 -54.074 1.00120.10 P
ATOM 3 OP1 U A 58 15.222 64.013 -53.649 1.00115.51 O
ATOM 4 OP2 U A 58 13.957 62.162 -54.893 1.00121.24 O
ATOM 5 O5' U A 58 16.445 62.204 -54.868 1.00124.40 O
ATOM 6 C5' U A 58 16.551 62.439 -56.268 1.00127.77 C
ATOM 7 C4' U A 58 16.873 61.152 -56.988 1.00127.81 C
ATOM 8 O4' U A 58 16.123 60.082 -56.380 1.00130.04 O
ATOM 9 C3' U A 58 16.502 61.135 -58.466 1.00132.59 C
ATOM 10 O3' U A 58 17.640 61.492 -59.256 1.00134.45 O
ATOM 11 C2' U A 58 16.176 59.662 -58.745 1.00133.69 C
ATOM 12 O2' U A 58 17.289 58.953 -59.255 1.00138.07 O
ATOM 13 C1' U A 58 15.821 59.114 -57.357 1.00131.09 C
ATOM 14 N1 U A 58 14.461 58.610 -57.117 1.00123.63 N
ATOM 15 C2 U A 58 14.077 57.443 -57.756 1.00124.34 C
ATOM 16 O2 U A 58 14.784 56.864 -58.559 1.00120.59 O
ATOM 17 N3 U A 58 12.830 56.978 -57.414 1.00125.00 N
ATOM 18 C4 U A 58 11.943 57.553 -56.527 1.00121.34 C
ATOM 19 O4 U A 58 10.890 56.969 -56.259 1.00115.74 O
ATOM 20 C5 U A 58 12.399 58.777 -55.939 1.00121.41 C
ATOM 21 C6 U A 58 13.610 59.253 -56.250 1.00117.94 C
ATOM 22 P C A 59 18.087 63.031 -59.401 1.00124.42 P
ATOM 23 OP1 C A 59 19.252 63.023 -60.325 1.00122.23 O
ATOM 24 OP2 C A 59 18.226 63.643 -58.053 1.00117.16 O
ATOM 25 O5' C A 59 16.866 63.728 -60.149 1.00131.28 O
TER
ATOM 1 O3' G B 16 11.416 55.032 -61.741 1.00127.69 O
ATOM 2 P G B 17 11.646 54.338 -60.296 1.00120.09 P
ATOM 3 OP1 G B 17 12.544 55.200 -59.485 1.00126.24 O
ATOM 4 OP2 G B 17 12.025 52.924 -60.545 1.00123.03 O
ATOM 5 O5' G B 17 10.216 54.327 -59.598 1.00115.16 O
ATOM 6 C5' G B 17 10.088 54.518 -58.187 1.00112.48 C
ATOM 7 C4' G B 17 8.726 54.066 -57.727 1.00109.71 C
ATOM 8 O4' G B 17 7.730 54.707 -58.542 1.00112.64 O
ATOM 9 C3' G B 17 8.481 52.570 -57.828 1.00111.44 C
ATOM 10 O3' G B 17 8.933 52.077 -56.552 1.00105.92 O
ATOM 11 C2' G B 17 6.987 52.452 -58.165 1.00112.46 C
ATOM 12 O2' G B 17 6.164 52.375 -57.022 1.00138.28 O
ATOM 13 C1' G B 17 6.685 53.806 -58.819 1.00114.11 C
ATOM 14 N9 G B 17 6.311 53.989 -60.221 1.00105.34 N
ATOM 15 C8 G B 17 6.998 53.641 -61.362 1.00 97.64 C
ATOM 16 N7 G B 17 6.487 54.176 -62.446 1.00 90.68 N
ATOM 17 C5 G B 17 5.373 54.877 -61.994 1.00 96.66 C
ATOM 18 C6 G B 17 4.439 55.727 -62.689 1.00 89.05 C
ATOM 19 O6 G B 17 4.440 56.089 -63.876 1.00 85.87 O
ATOM 20 N1 G B 17 3.448 56.199 -61.834 1.00 81.52 N
ATOM 21 C2 G B 17 3.370 55.932 -60.489 1.00 90.55 C
ATOM 22 N2 G B 17 2.330 56.459 -59.834 1.00 95.85 N
ATOM 23 N3 G B 17 4.246 55.197 -59.829 1.00105.09 N
ATOM 24 C4 G B 17 5.213 54.706 -60.636 1.00106.32 C
ATOM 25 P C B 18 8.183 50.869 -55.796 1.00100.32 P
ATOM 26 OP1 C B 18 6.937 51.387 -55.183 1.00106.84 O
ATOM 27 OP2 C B 18 9.206 50.245 -54.922 1.00121.45 O
ATOM 28 O5' C B 18 7.837 49.823 -56.948 1.00119.13 O
TER
ATOM 2 P U A 58 15.117 62.591 -54.074 1.00120.10 P
ATOM 3 OP1 U A 58 15.222 64.013 -53.649 1.00115.51 O
ATOM 4 OP2 U A 58 13.957 62.162 -54.893 1.00121.24 O
ATOM 5 O5' U A 58 16.445 62.204 -54.868 1.00124.40 O
ATOM 6 C5' U A 58 16.551 62.439 -56.268 1.00127.77 C
ATOM 7 C4' U A 58 16.873 61.152 -56.988 1.00127.81 C
ATOM 8 O4' U A 58 16.123 60.082 -56.380 1.00130.04 O
ATOM 9 C3' U A 58 16.502 61.135 -58.466 1.00132.59 C
ATOM 10 O3' U A 58 17.640 61.492 -59.256 1.00134.45 O
ATOM 11 C2' U A 58 16.176 59.662 -58.745 1.00133.69 C
ATOM 12 O2' U A 58 17.289 58.953 -59.255 1.00138.07 O
ATOM 13 C1' U A 58 15.821 59.114 -57.357 1.00131.09 C
ATOM 14 N1 U A 58 14.461 58.610 -57.117 1.00123.63 N
ATOM 15 C2 U A 58 14.077 57.443 -57.756 1.00124.34 C
ATOM 16 O2 U A 58 14.784 56.864 -58.559 1.00120.59 O
ATOM 17 N3 U A 58 12.830 56.978 -57.414 1.00125.00 N
ATOM 18 C4 U A 58 11.943 57.553 -56.527 1.00121.34 C
ATOM 19 O4 U A 58 10.890 56.969 -56.259 1.00115.74 O
ATOM 20 C5 U A 58 12.399 58.777 -55.939 1.00121.41 C
ATOM 21 C6 U A 58 13.610 59.253 -56.250 1.00117.94 C
ATOM 22 P C A 59 18.087 63.031 -59.401 1.00124.42 P
ATOM 23 OP1 C A 59 19.252 63.023 -60.325 1.00122.23 O
ATOM 24 OP2 C A 59 18.226 63.643 -58.053 1.00117.16 O
ATOM 25 O5' C A 59 16.866 63.728 -60.149 1.00131.28 O
TER
ATOM 1 O3' G B 16 11.416 55.032 -61.741 1.00127.69 O
ATOM 2 P G B 17 11.646 54.338 -60.296 1.00120.09 P
ATOM 3 OP1 G B 17 12.544 55.200 -59.485 1.00126.24 O
ATOM 4 OP2 G B 17 12.025 52.924 -60.545 1.00123.03 O
ATOM 5 O5' G B 17 10.216 54.327 -59.598 1.00115.16 O
ATOM 6 C5' G B 17 10.088 54.518 -58.187 1.00112.48 C
ATOM 7 C4' G B 17 8.726 54.066 -57.727 1.00109.71 C
ATOM 8 O4' G B 17 7.730 54.707 -58.542 1.00112.64 O
ATOM 9 C3' G B 17 8.481 52.570 -57.828 1.00111.44 C
ATOM 10 O3' G B 17 8.933 52.077 -56.552 1.00105.92 O
ATOM 11 C2' G B 17 6.987 52.452 -58.165 1.00112.46 C
ATOM 12 O2' G B 17 6.164 52.375 -57.022 1.00138.28 O
ATOM 13 C1' G B 17 6.685 53.806 -58.819 1.00114.11 C
ATOM 14 N9 G B 17 6.311 53.989 -60.221 1.00105.34 N
ATOM 15 C8 G B 17 6.998 53.641 -61.362 1.00 97.64 C
ATOM 16 N7 G B 17 6.487 54.176 -62.446 1.00 90.68 N
ATOM 17 C5 G B 17 5.373 54.877 -61.994 1.00 96.66 C
ATOM 18 C6 G B 17 4.439 55.727 -62.689 1.00 89.05 C
ATOM 19 O6 G B 17 4.440 56.089 -63.876 1.00 85.87 O
ATOM 20 N1 G B 17 3.448 56.199 -61.834 1.00 81.52 N
ATOM 21 C2 G B 17 3.370 55.932 -60.489 1.00 90.55 C
ATOM 22 N2 G B 17 2.330 56.459 -59.834 1.00 95.85 N
ATOM 23 N3 G B 17 4.246 55.197 -59.829 1.00105.09 N
ATOM 24 C4 G B 17 5.213 54.706 -60.636 1.00106.32 C
ATOM 25 P C B 18 8.183 50.869 -55.796 1.00100.32 P
ATOM 26 OP1 C B 18 6.937 51.387 -55.183 1.00106.84 O
ATOM 27 OP2 C B 18 9.206 50.245 -54.922 1.00121.45 O
ATOM 28 O5' C B 18 7.837 49.823 -56.948 1.00119.13 O
TER
Atoms:
C4: (11.943,57.553,-56.527)
N3: (12.830,56.978,-57.414)
OP1: (15.222,64.013,-53.649)
OP2: (13.957,62.162,-54.893)
C2: (14.077,57.443,-57.756)
C1': (15.821,59.114,-57.357)
C3': (16.502,61.135,-58.466)
O5': (16.445,62.204,-54.868)
O4': (16.123,60.082,-56.380)
C5': (16.551,62.439,-56.268)
P: (15.117,62.591,-54.074)
C4': (16.873,61.152,-56.988)
C2': (16.176,59.662,-58.745)
O2': (17.289,58.953,-59.255)
N1: (14.461,58.610,-57.117)
O4: (10.890,56.969,-56.259)
O2: (14.784,56.864,-58.559)
C6: (13.610,59.253,-56.250)
C5: (12.399,58.777,-55.939)
O3': (17.640,61.492,-59.256)
N3: (12.830,56.978,-57.414)
OP1: (15.222,64.013,-53.649)
OP2: (13.957,62.162,-54.893)
C2: (14.077,57.443,-57.756)
C1': (15.821,59.114,-57.357)
C3': (16.502,61.135,-58.466)
O5': (16.445,62.204,-54.868)
O4': (16.123,60.082,-56.380)
C5': (16.551,62.439,-56.268)
P: (15.117,62.591,-54.074)
C4': (16.873,61.152,-56.988)
C2': (16.176,59.662,-58.745)
O2': (17.289,58.953,-59.255)
N1: (14.461,58.610,-57.117)
O4: (10.890,56.969,-56.259)
O2: (14.784,56.864,-58.559)
C6: (13.610,59.253,-56.250)
C5: (12.399,58.777,-55.939)
O3': (17.640,61.492,-59.256)
OP1: (12.544,55.200,-59.485)
OP2: (12.025,52.924,-60.545)
C3': (8.481,52.570,-57.828)
C1': (6.685,53.806,-58.819)
C5': (10.088,54.518,-58.187)
O6: (4.440,56.089,-63.876)
O4': (7.730,54.707,-58.542)
C8: (6.998,53.641,-61.362)
C2: (3.370,55.932,-60.489)
C6: (4.439,55.727,-62.689)
C5: (5.373,54.877,-61.994)
C4: (5.213,54.706,-60.636)
P: (11.646,54.338,-60.296)
C4': (8.726,54.066,-57.727)
C2': (6.987,52.452,-58.165)
O2': (6.164,52.375,-57.022)
N1: (3.448,56.199,-61.834)
N2: (2.330,56.459,-59.834)
N3: (4.246,55.197,-59.829)
N7: (6.487,54.176,-62.446)
N9: (6.311,53.989,-60.221)
O5': (10.216,54.327,-59.598)
O3': (8.933,52.077,-56.552)
OP2: (12.025,52.924,-60.545)
C3': (8.481,52.570,-57.828)
C1': (6.685,53.806,-58.819)
C5': (10.088,54.518,-58.187)
O6: (4.440,56.089,-63.876)
O4': (7.730,54.707,-58.542)
C8: (6.998,53.641,-61.362)
C2: (3.370,55.932,-60.489)
C6: (4.439,55.727,-62.689)
C5: (5.373,54.877,-61.994)
C4: (5.213,54.706,-60.636)
P: (11.646,54.338,-60.296)
C4': (8.726,54.066,-57.727)
C2': (6.987,52.452,-58.165)
O2': (6.164,52.375,-57.022)
N1: (3.448,56.199,-61.834)
N2: (2.330,56.459,-59.834)
N3: (4.246,55.197,-59.829)
N7: (6.487,54.176,-62.446)
N9: (6.311,53.989,-60.221)
O5': (10.216,54.327,-59.598)
O3': (8.933,52.077,-56.552)
Image (generated by PyMOL):