Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2259:A2260
Extra
PDB:
ATOM 1 O3' U A2258 -118.969 -64.036 9.766 1.00 0.01 O
ATOM 2 P A A2259 -118.558 -65.454 10.309 1.00 0.01 P
ATOM 3 OP1 A A2259 -117.204 -65.347 10.839 1.00 0.01 O
ATOM 4 OP2 A A2259 -118.825 -66.420 9.239 1.00 0.01 O
ATOM 5 O5' A A2259 -119.569 -65.673 11.480 1.00 0.01 O
ATOM 6 C5' A A2259 -120.053 -66.957 11.778 1.00 0.01 C
ATOM 7 C4' A A2259 -120.435 -67.035 13.202 1.00 0.01 C
ATOM 8 O4' A A2259 -119.315 -66.599 13.995 1.00 0.01 O
ATOM 9 C3' A A2259 -121.597 -66.151 13.595 1.00 0.01 C
ATOM 10 O3' A A2259 -122.365 -66.811 14.565 1.00 0.01 O
ATOM 11 C2' A A2259 -120.946 -64.953 14.244 1.00 0.01 C
ATOM 12 O2' A A2259 -121.763 -64.364 15.227 1.00 0.01 O
ATOM 13 C1' A A2259 -119.712 -65.576 14.867 1.00 0.01 C
ATOM 14 N9 A A2259 -118.561 -64.677 15.059 1.00 0.01 N
ATOM 15 C8 A A2259 -117.480 -64.439 14.234 1.00 0.01 C
ATOM 16 N7 A A2259 -116.555 -63.647 14.725 1.00 0.01 N
ATOM 17 C5 A A2259 -117.038 -63.361 15.977 1.00 0.01 C
ATOM 18 C6 A A2259 -116.526 -62.607 17.020 1.00 0.01 C
ATOM 19 N6 A A2259 -115.392 -61.936 17.005 1.00 0.01 N
ATOM 20 N1 A A2259 -117.224 -62.526 18.135 1.00 0.01 N
ATOM 21 C2 A A2259 -118.373 -63.188 18.190 1.00 0.01 C
ATOM 22 N3 A A2259 -118.969 -63.947 17.295 1.00 0.01 N
ATOM 23 C4 A A2259 -118.234 -63.997 16.197 1.00 0.01 C
ATOM 24 P A A2260 -123.693 -67.529 14.143 1.00 0.01 P
ATOM 25 OP1 A A2260 -124.396 -66.637 13.227 1.00 0.01 O
ATOM 26 OP2 A A2260 -124.347 -67.951 15.361 1.00 0.01 O
ATOM 27 O5' A A2260 -123.187 -68.767 13.349 1.00 0.01 O
TER
ATOM 1 O3' A B2259 -122.365 -66.811 14.565 1.00 0.01 O
ATOM 2 P A B2260 -123.693 -67.529 14.143 1.00 0.01 P
ATOM 3 OP1 A B2260 -124.396 -66.637 13.227 1.00 0.01 O
ATOM 4 OP2 A B2260 -124.347 -67.951 15.361 1.00 0.01 O
ATOM 5 O5' A B2260 -123.187 -68.767 13.349 1.00 0.01 O
ATOM 6 C5' A B2260 -123.732 -69.071 12.081 1.00 0.01 C
ATOM 7 C4' A B2260 -123.042 -70.251 11.488 1.00 0.01 C
ATOM 8 O4' A B2260 -121.719 -69.866 11.097 1.00 0.01 O
ATOM 9 C3' A B2260 -122.852 -71.422 12.433 1.00 0.01 C
ATOM 10 O3' A B2260 -123.957 -72.317 12.396 1.00 0.01 O
ATOM 11 C2' A B2260 -121.543 -72.055 11.976 1.00 0.01 C
ATOM 12 O2' A B2260 -121.779 -73.123 11.093 1.00 0.01 O
ATOM 13 C1' A B2260 -120.853 -70.941 11.199 1.00 0.01 C
ATOM 14 N9 A B2260 -119.627 -70.481 11.836 1.00 0.01 N
ATOM 15 C8 A B2260 -118.481 -70.237 11.182 1.00 0.01 C
ATOM 16 N7 A B2260 -117.530 -69.838 11.974 1.00 0.01 N
ATOM 17 C5 A B2260 -118.094 -69.814 13.211 1.00 0.01 C
ATOM 18 C6 A B2260 -117.572 -69.452 14.430 1.00 0.01 C
ATOM 19 N6 A B2260 -116.335 -69.054 14.599 1.00 0.01 N
ATOM 20 N1 A B2260 -118.364 -69.510 15.480 1.00 0.01 N
ATOM 21 C2 A B2260 -119.596 -69.933 15.250 1.00 0.01 C
ATOM 22 N3 A B2260 -120.210 -70.301 14.131 1.00 0.01 N
ATOM 23 C4 A B2260 -119.384 -70.199 13.132 1.00 0.01 C
ATOM 24 P A B2261 -124.876 -72.550 13.679 1.00 0.01 P
ATOM 25 OP1 A B2261 -124.119 -72.095 14.821 1.00 0.01 O
ATOM 26 OP2 A B2261 -125.333 -73.943 13.633 1.00 0.01 O
ATOM 27 O5' A B2261 -126.093 -71.586 13.456 1.00 0.01 O
TER
ATOM 2 P A A2259 -118.558 -65.454 10.309 1.00 0.01 P
ATOM 3 OP1 A A2259 -117.204 -65.347 10.839 1.00 0.01 O
ATOM 4 OP2 A A2259 -118.825 -66.420 9.239 1.00 0.01 O
ATOM 5 O5' A A2259 -119.569 -65.673 11.480 1.00 0.01 O
ATOM 6 C5' A A2259 -120.053 -66.957 11.778 1.00 0.01 C
ATOM 7 C4' A A2259 -120.435 -67.035 13.202 1.00 0.01 C
ATOM 8 O4' A A2259 -119.315 -66.599 13.995 1.00 0.01 O
ATOM 9 C3' A A2259 -121.597 -66.151 13.595 1.00 0.01 C
ATOM 10 O3' A A2259 -122.365 -66.811 14.565 1.00 0.01 O
ATOM 11 C2' A A2259 -120.946 -64.953 14.244 1.00 0.01 C
ATOM 12 O2' A A2259 -121.763 -64.364 15.227 1.00 0.01 O
ATOM 13 C1' A A2259 -119.712 -65.576 14.867 1.00 0.01 C
ATOM 14 N9 A A2259 -118.561 -64.677 15.059 1.00 0.01 N
ATOM 15 C8 A A2259 -117.480 -64.439 14.234 1.00 0.01 C
ATOM 16 N7 A A2259 -116.555 -63.647 14.725 1.00 0.01 N
ATOM 17 C5 A A2259 -117.038 -63.361 15.977 1.00 0.01 C
ATOM 18 C6 A A2259 -116.526 -62.607 17.020 1.00 0.01 C
ATOM 19 N6 A A2259 -115.392 -61.936 17.005 1.00 0.01 N
ATOM 20 N1 A A2259 -117.224 -62.526 18.135 1.00 0.01 N
ATOM 21 C2 A A2259 -118.373 -63.188 18.190 1.00 0.01 C
ATOM 22 N3 A A2259 -118.969 -63.947 17.295 1.00 0.01 N
ATOM 23 C4 A A2259 -118.234 -63.997 16.197 1.00 0.01 C
ATOM 24 P A A2260 -123.693 -67.529 14.143 1.00 0.01 P
ATOM 25 OP1 A A2260 -124.396 -66.637 13.227 1.00 0.01 O
ATOM 26 OP2 A A2260 -124.347 -67.951 15.361 1.00 0.01 O
ATOM 27 O5' A A2260 -123.187 -68.767 13.349 1.00 0.01 O
TER
ATOM 1 O3' A B2259 -122.365 -66.811 14.565 1.00 0.01 O
ATOM 2 P A B2260 -123.693 -67.529 14.143 1.00 0.01 P
ATOM 3 OP1 A B2260 -124.396 -66.637 13.227 1.00 0.01 O
ATOM 4 OP2 A B2260 -124.347 -67.951 15.361 1.00 0.01 O
ATOM 5 O5' A B2260 -123.187 -68.767 13.349 1.00 0.01 O
ATOM 6 C5' A B2260 -123.732 -69.071 12.081 1.00 0.01 C
ATOM 7 C4' A B2260 -123.042 -70.251 11.488 1.00 0.01 C
ATOM 8 O4' A B2260 -121.719 -69.866 11.097 1.00 0.01 O
ATOM 9 C3' A B2260 -122.852 -71.422 12.433 1.00 0.01 C
ATOM 10 O3' A B2260 -123.957 -72.317 12.396 1.00 0.01 O
ATOM 11 C2' A B2260 -121.543 -72.055 11.976 1.00 0.01 C
ATOM 12 O2' A B2260 -121.779 -73.123 11.093 1.00 0.01 O
ATOM 13 C1' A B2260 -120.853 -70.941 11.199 1.00 0.01 C
ATOM 14 N9 A B2260 -119.627 -70.481 11.836 1.00 0.01 N
ATOM 15 C8 A B2260 -118.481 -70.237 11.182 1.00 0.01 C
ATOM 16 N7 A B2260 -117.530 -69.838 11.974 1.00 0.01 N
ATOM 17 C5 A B2260 -118.094 -69.814 13.211 1.00 0.01 C
ATOM 18 C6 A B2260 -117.572 -69.452 14.430 1.00 0.01 C
ATOM 19 N6 A B2260 -116.335 -69.054 14.599 1.00 0.01 N
ATOM 20 N1 A B2260 -118.364 -69.510 15.480 1.00 0.01 N
ATOM 21 C2 A B2260 -119.596 -69.933 15.250 1.00 0.01 C
ATOM 22 N3 A B2260 -120.210 -70.301 14.131 1.00 0.01 N
ATOM 23 C4 A B2260 -119.384 -70.199 13.132 1.00 0.01 C
ATOM 24 P A B2261 -124.876 -72.550 13.679 1.00 0.01 P
ATOM 25 OP1 A B2261 -124.119 -72.095 14.821 1.00 0.01 O
ATOM 26 OP2 A B2261 -125.333 -73.943 13.633 1.00 0.01 O
ATOM 27 O5' A B2261 -126.093 -71.586 13.456 1.00 0.01 O
TER
Atoms:
OP1: (-117.204,-65.347,10.839)
OP2: (-118.825,-66.420,9.239)
C3': (-121.597,-66.151,13.595)
C1': (-119.712,-65.576,14.867)
C5': (-120.053,-66.957,11.778)
O4': (-119.315,-66.599,13.995)
C8: (-117.480,-64.439,14.234)
O2': (-121.763,-64.364,15.227)
C6: (-116.526,-62.607,17.020)
C5: (-117.038,-63.361,15.977)
C4: (-118.234,-63.997,16.197)
P: (-118.558,-65.454,10.309)
C4': (-120.435,-67.035,13.202)
C2': (-120.946,-64.953,14.244)
C2: (-118.373,-63.188,18.190)
N1: (-117.224,-62.526,18.135)
N3: (-118.969,-63.947,17.295)
N6: (-115.392,-61.936,17.005)
N7: (-116.555,-63.647,14.725)
N9: (-118.561,-64.677,15.059)
O5': (-119.569,-65.673,11.480)
O3': (-122.365,-66.811,14.565)
OP2: (-118.825,-66.420,9.239)
C3': (-121.597,-66.151,13.595)
C1': (-119.712,-65.576,14.867)
C5': (-120.053,-66.957,11.778)
O4': (-119.315,-66.599,13.995)
C8: (-117.480,-64.439,14.234)
O2': (-121.763,-64.364,15.227)
C6: (-116.526,-62.607,17.020)
C5: (-117.038,-63.361,15.977)
C4: (-118.234,-63.997,16.197)
P: (-118.558,-65.454,10.309)
C4': (-120.435,-67.035,13.202)
C2': (-120.946,-64.953,14.244)
C2: (-118.373,-63.188,18.190)
N1: (-117.224,-62.526,18.135)
N3: (-118.969,-63.947,17.295)
N6: (-115.392,-61.936,17.005)
N7: (-116.555,-63.647,14.725)
N9: (-118.561,-64.677,15.059)
O5': (-119.569,-65.673,11.480)
O3': (-122.365,-66.811,14.565)
OP1: (-124.396,-66.637,13.227)
OP2: (-124.347,-67.951,15.361)
C3': (-122.852,-71.422,12.433)
C1': (-120.853,-70.941,11.199)
C5': (-123.732,-69.071,12.081)
O4': (-121.719,-69.866,11.097)
C8: (-118.481,-70.237,11.182)
O2': (-121.779,-73.123,11.093)
C6: (-117.572,-69.452,14.430)
C5: (-118.094,-69.814,13.211)
C4: (-119.384,-70.199,13.132)
P: (-123.693,-67.529,14.143)
C4': (-123.042,-70.251,11.488)
C2': (-121.543,-72.055,11.976)
C2: (-119.596,-69.933,15.250)
N1: (-118.364,-69.510,15.480)
N3: (-120.210,-70.301,14.131)
N6: (-116.335,-69.054,14.599)
N7: (-117.530,-69.838,11.974)
N9: (-119.627,-70.481,11.836)
O5': (-123.187,-68.767,13.349)
O3': (-123.957,-72.317,12.396)
OP2: (-124.347,-67.951,15.361)
C3': (-122.852,-71.422,12.433)
C1': (-120.853,-70.941,11.199)
C5': (-123.732,-69.071,12.081)
O4': (-121.719,-69.866,11.097)
C8: (-118.481,-70.237,11.182)
O2': (-121.779,-73.123,11.093)
C6: (-117.572,-69.452,14.430)
C5: (-118.094,-69.814,13.211)
C4: (-119.384,-70.199,13.132)
P: (-123.693,-67.529,14.143)
C4': (-123.042,-70.251,11.488)
C2': (-121.543,-72.055,11.976)
C2: (-119.596,-69.933,15.250)
N1: (-118.364,-69.510,15.480)
N3: (-120.210,-70.301,14.131)
N6: (-116.335,-69.054,14.599)
N7: (-117.530,-69.838,11.974)
N9: (-119.627,-70.481,11.836)
O5': (-123.187,-68.767,13.349)
O3': (-123.957,-72.317,12.396)
Image (generated by PyMOL):