Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12387:12388
Extra
PDB:
ATOM 1 O3' U A2386 28.612 -32.122 36.946 1.00 37.75 O
ATOM 2 P A A2387 30.204 -32.000 36.646 1.00 37.90 P
ATOM 3 OP1 A A2387 30.788 -31.269 37.833 1.00 37.52 O
ATOM 4 OP2 A A2387 30.396 -31.428 35.265 1.00 38.08 O
ATOM 5 O5' A A2387 30.677 -33.510 36.642 1.00 38.10 O
ATOM 6 C5' A A2387 31.900 -33.863 36.051 1.00 38.20 C
ATOM 7 C4' A A2387 32.521 -34.997 36.777 1.00 38.21 C
ATOM 8 O4' A A2387 32.810 -34.588 38.137 1.00 37.86 O
ATOM 9 C3' A A2387 31.655 -36.243 36.893 1.00 38.46 C
ATOM 10 O3' A A2387 32.451 -37.390 36.639 1.00 38.67 O
ATOM 11 C2' A A2387 31.198 -36.242 38.353 1.00 38.20 C
ATOM 12 O2' A A2387 30.929 -37.527 38.870 1.00 38.36 O
ATOM 13 C1' A A2387 32.403 -35.611 39.016 1.00 37.90 C
ATOM 14 N9 A A2387 32.197 -35.016 40.326 1.00 37.57 N
ATOM 15 C8 A A2387 31.947 -33.699 40.581 1.00 37.32 C
ATOM 16 N7 A A2387 31.942 -33.343 41.849 1.00 37.05 N
ATOM 17 C5 A A2387 32.248 -34.531 42.450 1.00 37.13 C
ATOM 18 C6 A A2387 32.418 -34.811 43.793 1.00 36.95 C
ATOM 19 N6 A A2387 32.290 -33.874 44.755 1.00 36.66 N
ATOM 20 N1 A A2387 32.732 -36.089 44.097 1.00 37.11 N
ATOM 21 C2 A A2387 32.881 -36.965 43.101 1.00 37.41 C
ATOM 22 N3 A A2387 32.787 -36.795 41.791 1.00 37.60 N
ATOM 23 C4 A A2387 32.454 -35.543 41.538 1.00 37.44 C
ATOM 24 P A A2388 32.719 -37.838 35.120 1.00 40.87 P
ATOM 25 OP1 A A2388 31.364 -37.886 34.378 1.00 41.12 O
ATOM 26 OP2 A A2388 33.495 -39.067 35.204 1.00 41.05 O
ATOM 27 O5' A A2388 33.599 -36.633 34.560 1.00 40.72 O
TER
ATOM 1 O3' A B2387 32.451 -37.390 36.639 1.00 38.67 O
ATOM 2 P A B2388 32.719 -37.838 35.120 1.00 40.87 P
ATOM 3 OP1 A B2388 31.364 -37.886 34.378 1.00 41.12 O
ATOM 4 OP2 A B2388 33.495 -39.067 35.204 1.00 41.05 O
ATOM 5 O5' A B2388 33.599 -36.633 34.560 1.00 40.72 O
ATOM 6 C5' A B2388 33.589 -36.284 33.185 1.00 40.95 C
ATOM 7 C4' A B2388 34.617 -35.222 32.872 1.00 40.78 C
ATOM 8 O4' A B2388 34.386 -34.072 33.696 1.00 40.41 O
ATOM 9 C3' A B2388 36.071 -35.605 33.130 1.00 40.72 C
ATOM 10 O3' A B2388 36.665 -36.199 32.001 1.00 41.05 O
ATOM 11 C2' A B2388 36.758 -34.297 33.560 1.00 40.37 C
ATOM 12 O2' A B2388 37.489 -33.728 32.494 1.00 40.48 O
ATOM 13 C1' A B2388 35.591 -33.367 33.892 1.00 40.19 C
ATOM 14 N9 A B2388 35.635 -32.843 35.280 1.00 39.82 N
ATOM 15 C8 A B2388 35.447 -31.535 35.634 1.00 39.55 C
ATOM 16 N7 A B2388 35.475 -31.301 36.913 1.00 39.26 N
ATOM 17 C5 A B2388 35.719 -32.528 37.447 1.00 39.34 C
ATOM 18 C6 A B2388 35.860 -32.932 38.759 1.00 39.15 C
ATOM 19 N6 A B2388 35.794 -32.095 39.757 1.00 38.84 N
ATOM 20 N1 A B2388 36.052 -34.227 39.031 1.00 39.30 N
ATOM 21 C2 A B2388 36.128 -35.066 37.993 1.00 39.63 C
ATOM 22 N3 A B2388 36.033 -34.802 36.687 1.00 39.84 N
ATOM 23 C4 A B2388 35.808 -33.497 36.473 1.00 39.68 C
ATOM 24 P A B2389 37.283 -37.667 32.094 1.00 44.83 P
ATOM 25 OP1 A B2389 37.686 -37.864 33.496 1.00 44.54 O
ATOM 26 OP2 A B2389 38.322 -37.774 31.026 1.00 45.06 O
ATOM 27 O5' A B2389 36.055 -38.636 31.764 1.00 45.14 O
TER
ATOM 2 P A A2387 30.204 -32.000 36.646 1.00 37.90 P
ATOM 3 OP1 A A2387 30.788 -31.269 37.833 1.00 37.52 O
ATOM 4 OP2 A A2387 30.396 -31.428 35.265 1.00 38.08 O
ATOM 5 O5' A A2387 30.677 -33.510 36.642 1.00 38.10 O
ATOM 6 C5' A A2387 31.900 -33.863 36.051 1.00 38.20 C
ATOM 7 C4' A A2387 32.521 -34.997 36.777 1.00 38.21 C
ATOM 8 O4' A A2387 32.810 -34.588 38.137 1.00 37.86 O
ATOM 9 C3' A A2387 31.655 -36.243 36.893 1.00 38.46 C
ATOM 10 O3' A A2387 32.451 -37.390 36.639 1.00 38.67 O
ATOM 11 C2' A A2387 31.198 -36.242 38.353 1.00 38.20 C
ATOM 12 O2' A A2387 30.929 -37.527 38.870 1.00 38.36 O
ATOM 13 C1' A A2387 32.403 -35.611 39.016 1.00 37.90 C
ATOM 14 N9 A A2387 32.197 -35.016 40.326 1.00 37.57 N
ATOM 15 C8 A A2387 31.947 -33.699 40.581 1.00 37.32 C
ATOM 16 N7 A A2387 31.942 -33.343 41.849 1.00 37.05 N
ATOM 17 C5 A A2387 32.248 -34.531 42.450 1.00 37.13 C
ATOM 18 C6 A A2387 32.418 -34.811 43.793 1.00 36.95 C
ATOM 19 N6 A A2387 32.290 -33.874 44.755 1.00 36.66 N
ATOM 20 N1 A A2387 32.732 -36.089 44.097 1.00 37.11 N
ATOM 21 C2 A A2387 32.881 -36.965 43.101 1.00 37.41 C
ATOM 22 N3 A A2387 32.787 -36.795 41.791 1.00 37.60 N
ATOM 23 C4 A A2387 32.454 -35.543 41.538 1.00 37.44 C
ATOM 24 P A A2388 32.719 -37.838 35.120 1.00 40.87 P
ATOM 25 OP1 A A2388 31.364 -37.886 34.378 1.00 41.12 O
ATOM 26 OP2 A A2388 33.495 -39.067 35.204 1.00 41.05 O
ATOM 27 O5' A A2388 33.599 -36.633 34.560 1.00 40.72 O
TER
ATOM 1 O3' A B2387 32.451 -37.390 36.639 1.00 38.67 O
ATOM 2 P A B2388 32.719 -37.838 35.120 1.00 40.87 P
ATOM 3 OP1 A B2388 31.364 -37.886 34.378 1.00 41.12 O
ATOM 4 OP2 A B2388 33.495 -39.067 35.204 1.00 41.05 O
ATOM 5 O5' A B2388 33.599 -36.633 34.560 1.00 40.72 O
ATOM 6 C5' A B2388 33.589 -36.284 33.185 1.00 40.95 C
ATOM 7 C4' A B2388 34.617 -35.222 32.872 1.00 40.78 C
ATOM 8 O4' A B2388 34.386 -34.072 33.696 1.00 40.41 O
ATOM 9 C3' A B2388 36.071 -35.605 33.130 1.00 40.72 C
ATOM 10 O3' A B2388 36.665 -36.199 32.001 1.00 41.05 O
ATOM 11 C2' A B2388 36.758 -34.297 33.560 1.00 40.37 C
ATOM 12 O2' A B2388 37.489 -33.728 32.494 1.00 40.48 O
ATOM 13 C1' A B2388 35.591 -33.367 33.892 1.00 40.19 C
ATOM 14 N9 A B2388 35.635 -32.843 35.280 1.00 39.82 N
ATOM 15 C8 A B2388 35.447 -31.535 35.634 1.00 39.55 C
ATOM 16 N7 A B2388 35.475 -31.301 36.913 1.00 39.26 N
ATOM 17 C5 A B2388 35.719 -32.528 37.447 1.00 39.34 C
ATOM 18 C6 A B2388 35.860 -32.932 38.759 1.00 39.15 C
ATOM 19 N6 A B2388 35.794 -32.095 39.757 1.00 38.84 N
ATOM 20 N1 A B2388 36.052 -34.227 39.031 1.00 39.30 N
ATOM 21 C2 A B2388 36.128 -35.066 37.993 1.00 39.63 C
ATOM 22 N3 A B2388 36.033 -34.802 36.687 1.00 39.84 N
ATOM 23 C4 A B2388 35.808 -33.497 36.473 1.00 39.68 C
ATOM 24 P A B2389 37.283 -37.667 32.094 1.00 44.83 P
ATOM 25 OP1 A B2389 37.686 -37.864 33.496 1.00 44.54 O
ATOM 26 OP2 A B2389 38.322 -37.774 31.026 1.00 45.06 O
ATOM 27 O5' A B2389 36.055 -38.636 31.764 1.00 45.14 O
TER
Atoms:
OP1: (30.788,-31.269,37.833)
OP2: (30.396,-31.428,35.265)
C3': (31.655,-36.243,36.893)
C1': (32.403,-35.611,39.016)
C5': (31.900,-33.863,36.051)
O4': (32.810,-34.588,38.137)
C8: (31.947,-33.699,40.581)
O2': (30.929,-37.527,38.870)
C6: (32.418,-34.811,43.793)
C5: (32.248,-34.531,42.450)
C4: (32.454,-35.543,41.538)
P: (30.204,-32.000,36.646)
C4': (32.521,-34.997,36.777)
C2': (31.198,-36.242,38.353)
C2: (32.881,-36.965,43.101)
N1: (32.732,-36.089,44.097)
N3: (32.787,-36.795,41.791)
N6: (32.290,-33.874,44.755)
N7: (31.942,-33.343,41.849)
N9: (32.197,-35.016,40.326)
O5': (30.677,-33.510,36.642)
O3': (32.451,-37.390,36.639)
OP2: (30.396,-31.428,35.265)
C3': (31.655,-36.243,36.893)
C1': (32.403,-35.611,39.016)
C5': (31.900,-33.863,36.051)
O4': (32.810,-34.588,38.137)
C8: (31.947,-33.699,40.581)
O2': (30.929,-37.527,38.870)
C6: (32.418,-34.811,43.793)
C5: (32.248,-34.531,42.450)
C4: (32.454,-35.543,41.538)
P: (30.204,-32.000,36.646)
C4': (32.521,-34.997,36.777)
C2': (31.198,-36.242,38.353)
C2: (32.881,-36.965,43.101)
N1: (32.732,-36.089,44.097)
N3: (32.787,-36.795,41.791)
N6: (32.290,-33.874,44.755)
N7: (31.942,-33.343,41.849)
N9: (32.197,-35.016,40.326)
O5': (30.677,-33.510,36.642)
O3': (32.451,-37.390,36.639)
OP1: (31.364,-37.886,34.378)
OP2: (33.495,-39.067,35.204)
C3': (36.071,-35.605,33.130)
C1': (35.591,-33.367,33.892)
C5': (33.589,-36.284,33.185)
O4': (34.386,-34.072,33.696)
C8: (35.447,-31.535,35.634)
O2': (37.489,-33.728,32.494)
C6: (35.860,-32.932,38.759)
C5: (35.719,-32.528,37.447)
C4: (35.808,-33.497,36.473)
P: (32.719,-37.838,35.120)
C4': (34.617,-35.222,32.872)
C2': (36.758,-34.297,33.560)
C2: (36.128,-35.066,37.993)
N1: (36.052,-34.227,39.031)
N3: (36.033,-34.802,36.687)
N6: (35.794,-32.095,39.757)
N7: (35.475,-31.301,36.913)
N9: (35.635,-32.843,35.280)
O5': (33.599,-36.633,34.560)
O3': (36.665,-36.199,32.001)
OP2: (33.495,-39.067,35.204)
C3': (36.071,-35.605,33.130)
C1': (35.591,-33.367,33.892)
C5': (33.589,-36.284,33.185)
O4': (34.386,-34.072,33.696)
C8: (35.447,-31.535,35.634)
O2': (37.489,-33.728,32.494)
C6: (35.860,-32.932,38.759)
C5: (35.719,-32.528,37.447)
C4: (35.808,-33.497,36.473)
P: (32.719,-37.838,35.120)
C4': (34.617,-35.222,32.872)
C2': (36.758,-34.297,33.560)
C2: (36.128,-35.066,37.993)
N1: (36.052,-34.227,39.031)
N3: (36.033,-34.802,36.687)
N6: (35.794,-32.095,39.757)
N7: (35.475,-31.301,36.913)
N9: (35.635,-32.843,35.280)
O5': (33.599,-36.633,34.560)
O3': (36.665,-36.199,32.001)
Image (generated by PyMOL):