ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3L0U:A44:A45

Extra

PDB:
ATOM 1 O3' G A 43 4.671 -35.510 -0.360 1.00 84.09 O
ATOM 2 P U A 44 3.584 -34.715 -1.245 1.00 84.80 P
ATOM 3 OP1 U A 44 3.298 -33.423 -0.580 1.00 82.54 O
ATOM 4 OP2 U A 44 2.477 -35.655 -1.550 1.00 86.09 O
ATOM 5 O5' U A 44 4.388 -34.421 -2.604 1.00 86.11 O
ATOM 6 C5' U A 44 3.685 -34.239 -3.829 1.00 87.95 C
ATOM 7 C4' U A 44 4.026 -32.910 -4.498 1.00 87.55 C
ATOM 8 O4' U A 44 3.022 -32.610 -5.500 1.00 89.36 O
ATOM 9 C3' U A 44 3.997 -31.674 -3.621 1.00 85.22 C
ATOM 10 O3' U A 44 4.663 -30.586 -4.277 1.00 85.33 O
ATOM 11 C2' U A 44 2.499 -31.423 -3.535 1.00 85.52 C
ATOM 12 O2' U A 44 2.169 -30.126 -3.073 1.00 84.45 O
ATOM 13 C1' U A 44 2.143 -31.603 -5.006 1.00 87.86 C
ATOM 14 N1 U A 44 0.750 -32.040 -5.312 1.00 89.04 N
ATOM 15 C2 U A 44 -0.060 -31.227 -6.083 1.00 90.09 C
ATOM 16 O2 U A 44 0.281 -30.133 -6.488 1.00 89.68 O
ATOM 17 N3 U A 44 -1.302 -31.741 -6.351 1.00 91.84 N
ATOM 18 C4 U A 44 -1.798 -32.966 -5.950 1.00 92.39 C
ATOM 19 O4 U A 44 -2.928 -33.294 -6.271 1.00 94.30 O
ATOM 20 C5 U A 44 -0.895 -33.767 -5.169 1.00 91.12 C
ATOM 21 C6 U A 44 0.321 -33.285 -4.893 1.00 89.61 C
ATOM 22 P G A 45 6.250 -30.387 -4.196 1.00 84.87 P
ATOM 23 OP1 G A 45 6.612 -29.273 -5.104 1.00 84.71 O
ATOM 24 OP2 G A 45 6.904 -31.705 -4.359 1.00 86.13 O
ATOM 25 O5' G A 45 6.448 -29.916 -2.677 1.00 82.26 O
TER

ATOM 1 O3' U B 44 4.663 -30.586 -4.277 1.00 85.33 O
ATOM 2 P G B 45 6.250 -30.387 -4.196 1.00 84.87 P
ATOM 3 OP1 G B 45 6.612 -29.273 -5.104 1.00 84.71 O
ATOM 4 OP2 G B 45 6.904 -31.705 -4.359 1.00 86.13 O
ATOM 5 O5' G B 45 6.448 -29.916 -2.677 1.00 82.26 O
ATOM 6 C5' G B 45 5.848 -28.706 -2.209 1.00 80.57 C
ATOM 7 C4' G B 45 6.897 -27.635 -1.984 1.00 79.01 C
ATOM 8 O4' G B 45 7.513 -27.854 -0.695 1.00 77.08 O
ATOM 9 C3' G B 45 8.017 -27.623 -3.025 1.00 80.06 C
ATOM 10 O3' G B 45 7.816 -26.548 -4.010 1.00 81.24 O
ATOM 11 C2' G B 45 9.328 -27.548 -2.225 1.00 78.58 C
ATOM 12 O2' G B 45 9.946 -26.278 -2.239 1.00 78.02 O
ATOM 13 C1' G B 45 8.920 -27.940 -0.798 1.00 76.98 C
ATOM 14 N9 G B 45 9.320 -29.292 -0.406 1.00 76.89 N
ATOM 15 C8 G B 45 9.128 -30.450 -1.115 1.00 78.54 C
ATOM 16 N7 G B 45 9.585 -31.511 -0.513 1.00 78.85 N
ATOM 17 C5 G B 45 10.109 -31.030 0.675 1.00 77.01 C
ATOM 18 C6 G B 45 10.745 -31.720 1.735 1.00 76.87 C
ATOM 19 O6 G B 45 10.972 -32.932 1.833 1.00 78.44 O
ATOM 20 N1 G B 45 11.133 -30.856 2.756 1.00 75.25 N
ATOM 21 C2 G B 45 10.935 -29.496 2.752 1.00 73.72 C
ATOM 22 N2 G B 45 11.380 -28.831 3.825 1.00 72.44 N
ATOM 23 N3 G B 45 10.341 -28.836 1.763 1.00 73.88 N
ATOM 24 C4 G B 45 9.953 -29.665 0.760 1.00 75.71 C
ATOM 25 P U B 46 7.887 -24.967 -3.677 1.00 80.06 P
ATOM 26 OP1 U B 46 7.864 -24.774 -2.210 1.00 77.64 O
ATOM 27 OP2 U B 46 6.872 -24.285 -4.509 1.00 81.39 O
ATOM 28 O5' U B 46 9.347 -24.577 -4.242 1.00 80.58 O
TER

Atoms:
C4: (-1.798,-32.966,-5.950)
N3: (-1.302,-31.741,-6.351)
OP1: (3.298,-33.423,-0.580)
OP2: (2.477,-35.655,-1.550)
C2: (-0.060,-31.227,-6.083)
C1': (2.143,-31.603,-5.006)
C3': (3.997,-31.674,-3.621)
O5': (4.388,-34.421,-2.604)
O4': (3.022,-32.610,-5.500)
C5': (3.685,-34.239,-3.829)
P: (3.584,-34.715,-1.245)
C4': (4.026,-32.910,-4.498)
C2': (2.499,-31.423,-3.535)
O2': (2.169,-30.126,-3.073)
N1: (0.750,-32.040,-5.312)
O4: (-2.928,-33.294,-6.271)
O2: (0.281,-30.133,-6.488)
C6: (0.321,-33.285,-4.893)
C5: (-0.895,-33.767,-5.169)
O3': (4.663,-30.586,-4.277)
OP1: (6.612,-29.273,-5.104)
OP2: (6.904,-31.705,-4.359)
C3': (8.017,-27.623,-3.025)
C1': (8.920,-27.940,-0.798)
C5': (5.848,-28.706,-2.209)
O6: (10.972,-32.932,1.833)
O4': (7.513,-27.854,-0.695)
C8: (9.128,-30.450,-1.115)
C2: (10.935,-29.496,2.752)
C6: (10.745,-31.720,1.735)
C5: (10.109,-31.030,0.675)
C4: (9.953,-29.665,0.760)
P: (6.250,-30.387,-4.196)
C4': (6.897,-27.635,-1.984)
C2': (9.328,-27.548,-2.225)
O2': (9.946,-26.278,-2.239)
N1: (11.133,-30.856,2.756)
N2: (11.380,-28.831,3.825)
N3: (10.341,-28.836,1.763)
N7: (9.585,-31.511,-0.513)
N9: (9.320,-29.292,-0.406)
O5': (6.448,-29.916,-2.677)
O3': (7.816,-26.548,-4.010)
Image (generated by PyMOL):
PyMOL image
show in jmol