Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3PDR:X32:X33
Extra
PDB:
ATOM 1 O3' A A 31 -5.783 -16.285 20.057 1.00 25.80 O
ATOM 2 P U A 32 -5.725 -17.425 18.937 1.00 32.16 P
ATOM 3 OP1 U A 32 -7.129 -17.693 18.535 1.00 28.43 O
ATOM 4 OP2 U A 32 -4.919 -18.551 19.481 1.00 33.19 O
ATOM 5 O5' U A 32 -4.978 -16.659 17.777 1.00 39.27 O
ATOM 6 C5' U A 32 -3.589 -16.379 17.888 1.00 44.76 C
ATOM 7 C4' U A 32 -2.891 -16.753 16.608 1.00 52.90 C
ATOM 8 O4' U A 32 -2.318 -18.086 16.718 1.00 52.07 O
ATOM 9 C3' U A 32 -3.801 -16.788 15.380 1.00 54.98 C
ATOM 10 O3' U A 32 -3.012 -16.476 14.240 1.00 63.15 O
ATOM 11 C2' U A 32 -4.151 -18.262 15.278 1.00 54.19 C
ATOM 12 O2' U A 32 -4.611 -18.652 14.002 1.00 56.78 O
ATOM 13 C1' U A 32 -2.771 -18.832 15.600 1.00 57.52 C
ATOM 14 N1 U A 32 -2.599 -20.300 15.733 1.00 59.24 N
ATOM 15 C2 U A 32 -3.274 -21.029 16.701 1.00 56.69 C
ATOM 16 O2 U A 32 -4.052 -20.544 17.505 1.00 50.85 O
ATOM 17 N3 U A 32 -2.994 -22.375 16.685 1.00 59.36 N
ATOM 18 C4 U A 32 -2.134 -23.043 15.830 1.00 66.97 C
ATOM 19 O4 U A 32 -1.986 -24.262 15.940 1.00 72.85 O
ATOM 20 C5 U A 32 -1.476 -22.216 14.867 1.00 65.76 C
ATOM 21 C6 U A 32 -1.727 -20.908 14.858 1.00 60.87 C
ATOM 22 P A A 33 -3.348 -15.234 13.294 1.00 72.40 P
ATOM 23 OP1 A A 33 -4.720 -14.755 13.603 1.00 68.36 O
ATOM 24 OP2 A A 33 -3.035 -15.667 11.908 1.00 76.96 O
ATOM 25 O5' A A 33 -2.226 -14.258 13.853 1.00 71.47 O
TER
ATOM 1 O3' U B 32 -3.012 -16.476 14.240 1.00 63.15 O
ATOM 2 P A B 33 -3.348 -15.234 13.294 1.00 72.40 P
ATOM 3 OP1 A B 33 -4.720 -14.755 13.603 1.00 68.36 O
ATOM 4 OP2 A B 33 -3.035 -15.667 11.908 1.00 76.96 O
ATOM 5 O5' A B 33 -2.226 -14.258 13.853 1.00 71.47 O
ATOM 6 C5' A B 33 -0.927 -14.786 14.099 1.00 72.51 C
ATOM 7 C4' A B 33 0.114 -14.010 13.337 1.00 79.95 C
ATOM 8 O4' A B 33 -0.227 -14.009 11.919 1.00 86.59 O
ATOM 9 C3' A B 33 0.214 -12.541 13.736 1.00 79.56 C
ATOM 10 O3' A B 33 1.556 -12.107 13.506 1.00 78.09 O
ATOM 11 C2' A B 33 -0.743 -11.886 12.741 1.00 83.94 C
ATOM 12 O2' A B 33 -0.629 -10.486 12.575 1.00 82.01 O
ATOM 13 C1' A B 33 -0.388 -12.667 11.479 1.00 89.85 C
ATOM 14 N9 A B 33 -1.386 -12.590 10.402 1.00 95.19 N
ATOM 15 C8 A B 33 -2.621 -13.195 10.320 1.00 94.65 C
ATOM 16 N7 A B 33 -3.281 -12.918 9.218 1.00 97.79 N
ATOM 17 C5 A B 33 -2.426 -12.069 8.522 1.00102.88 C
ATOM 18 C6 A B 33 -2.539 -11.420 7.274 1.00107.23 C
ATOM 19 N6 A B 33 -3.605 -11.531 6.472 1.00105.58 N
ATOM 20 N1 A B 33 -1.502 -10.642 6.875 1.00107.56 N
ATOM 21 C2 A B 33 -0.431 -10.530 7.677 1.00102.75 C
ATOM 22 N3 A B 33 -0.210 -11.089 8.867 1.00 99.37 N
ATOM 23 C4 A B 33 -1.256 -11.857 9.239 1.00 99.48 C
ATOM 24 P C B 34 1.958 -10.555 13.334 1.00 84.38 P
ATOM 25 OP1 C B 34 1.636 -10.128 11.946 1.00 83.31 O
ATOM 26 OP2 C B 34 3.372 -10.475 13.788 1.00 75.51 O
ATOM 27 O5' C B 34 0.977 -9.838 14.371 1.00 72.67 O
TER
ATOM 2 P U A 32 -5.725 -17.425 18.937 1.00 32.16 P
ATOM 3 OP1 U A 32 -7.129 -17.693 18.535 1.00 28.43 O
ATOM 4 OP2 U A 32 -4.919 -18.551 19.481 1.00 33.19 O
ATOM 5 O5' U A 32 -4.978 -16.659 17.777 1.00 39.27 O
ATOM 6 C5' U A 32 -3.589 -16.379 17.888 1.00 44.76 C
ATOM 7 C4' U A 32 -2.891 -16.753 16.608 1.00 52.90 C
ATOM 8 O4' U A 32 -2.318 -18.086 16.718 1.00 52.07 O
ATOM 9 C3' U A 32 -3.801 -16.788 15.380 1.00 54.98 C
ATOM 10 O3' U A 32 -3.012 -16.476 14.240 1.00 63.15 O
ATOM 11 C2' U A 32 -4.151 -18.262 15.278 1.00 54.19 C
ATOM 12 O2' U A 32 -4.611 -18.652 14.002 1.00 56.78 O
ATOM 13 C1' U A 32 -2.771 -18.832 15.600 1.00 57.52 C
ATOM 14 N1 U A 32 -2.599 -20.300 15.733 1.00 59.24 N
ATOM 15 C2 U A 32 -3.274 -21.029 16.701 1.00 56.69 C
ATOM 16 O2 U A 32 -4.052 -20.544 17.505 1.00 50.85 O
ATOM 17 N3 U A 32 -2.994 -22.375 16.685 1.00 59.36 N
ATOM 18 C4 U A 32 -2.134 -23.043 15.830 1.00 66.97 C
ATOM 19 O4 U A 32 -1.986 -24.262 15.940 1.00 72.85 O
ATOM 20 C5 U A 32 -1.476 -22.216 14.867 1.00 65.76 C
ATOM 21 C6 U A 32 -1.727 -20.908 14.858 1.00 60.87 C
ATOM 22 P A A 33 -3.348 -15.234 13.294 1.00 72.40 P
ATOM 23 OP1 A A 33 -4.720 -14.755 13.603 1.00 68.36 O
ATOM 24 OP2 A A 33 -3.035 -15.667 11.908 1.00 76.96 O
ATOM 25 O5' A A 33 -2.226 -14.258 13.853 1.00 71.47 O
TER
ATOM 1 O3' U B 32 -3.012 -16.476 14.240 1.00 63.15 O
ATOM 2 P A B 33 -3.348 -15.234 13.294 1.00 72.40 P
ATOM 3 OP1 A B 33 -4.720 -14.755 13.603 1.00 68.36 O
ATOM 4 OP2 A B 33 -3.035 -15.667 11.908 1.00 76.96 O
ATOM 5 O5' A B 33 -2.226 -14.258 13.853 1.00 71.47 O
ATOM 6 C5' A B 33 -0.927 -14.786 14.099 1.00 72.51 C
ATOM 7 C4' A B 33 0.114 -14.010 13.337 1.00 79.95 C
ATOM 8 O4' A B 33 -0.227 -14.009 11.919 1.00 86.59 O
ATOM 9 C3' A B 33 0.214 -12.541 13.736 1.00 79.56 C
ATOM 10 O3' A B 33 1.556 -12.107 13.506 1.00 78.09 O
ATOM 11 C2' A B 33 -0.743 -11.886 12.741 1.00 83.94 C
ATOM 12 O2' A B 33 -0.629 -10.486 12.575 1.00 82.01 O
ATOM 13 C1' A B 33 -0.388 -12.667 11.479 1.00 89.85 C
ATOM 14 N9 A B 33 -1.386 -12.590 10.402 1.00 95.19 N
ATOM 15 C8 A B 33 -2.621 -13.195 10.320 1.00 94.65 C
ATOM 16 N7 A B 33 -3.281 -12.918 9.218 1.00 97.79 N
ATOM 17 C5 A B 33 -2.426 -12.069 8.522 1.00102.88 C
ATOM 18 C6 A B 33 -2.539 -11.420 7.274 1.00107.23 C
ATOM 19 N6 A B 33 -3.605 -11.531 6.472 1.00105.58 N
ATOM 20 N1 A B 33 -1.502 -10.642 6.875 1.00107.56 N
ATOM 21 C2 A B 33 -0.431 -10.530 7.677 1.00102.75 C
ATOM 22 N3 A B 33 -0.210 -11.089 8.867 1.00 99.37 N
ATOM 23 C4 A B 33 -1.256 -11.857 9.239 1.00 99.48 C
ATOM 24 P C B 34 1.958 -10.555 13.334 1.00 84.38 P
ATOM 25 OP1 C B 34 1.636 -10.128 11.946 1.00 83.31 O
ATOM 26 OP2 C B 34 3.372 -10.475 13.788 1.00 75.51 O
ATOM 27 O5' C B 34 0.977 -9.838 14.371 1.00 72.67 O
TER
Atoms:
C4: (-2.134,-23.043,15.830)
N3: (-2.994,-22.375,16.685)
OP1: (-7.129,-17.693,18.535)
OP2: (-4.919,-18.551,19.481)
C2: (-3.274,-21.029,16.701)
C1': (-2.771,-18.832,15.600)
C3': (-3.801,-16.788,15.380)
O5': (-4.978,-16.659,17.777)
O4': (-2.318,-18.086,16.718)
C5': (-3.589,-16.379,17.888)
P: (-5.725,-17.425,18.937)
C4': (-2.891,-16.753,16.608)
C2': (-4.151,-18.262,15.278)
O2': (-4.611,-18.652,14.002)
N1: (-2.599,-20.300,15.733)
O4: (-1.986,-24.262,15.940)
O2: (-4.052,-20.544,17.505)
C6: (-1.727,-20.908,14.858)
C5: (-1.476,-22.216,14.867)
O3': (-3.012,-16.476,14.240)
N3: (-2.994,-22.375,16.685)
OP1: (-7.129,-17.693,18.535)
OP2: (-4.919,-18.551,19.481)
C2: (-3.274,-21.029,16.701)
C1': (-2.771,-18.832,15.600)
C3': (-3.801,-16.788,15.380)
O5': (-4.978,-16.659,17.777)
O4': (-2.318,-18.086,16.718)
C5': (-3.589,-16.379,17.888)
P: (-5.725,-17.425,18.937)
C4': (-2.891,-16.753,16.608)
C2': (-4.151,-18.262,15.278)
O2': (-4.611,-18.652,14.002)
N1: (-2.599,-20.300,15.733)
O4: (-1.986,-24.262,15.940)
O2: (-4.052,-20.544,17.505)
C6: (-1.727,-20.908,14.858)
C5: (-1.476,-22.216,14.867)
O3': (-3.012,-16.476,14.240)
OP1: (-4.720,-14.755,13.603)
OP2: (-3.035,-15.667,11.908)
C3': (0.214,-12.541,13.736)
C1': (-0.388,-12.667,11.479)
C5': (-0.927,-14.786,14.099)
O4': (-0.227,-14.009,11.919)
C8: (-2.621,-13.195,10.320)
O2': (-0.629,-10.486,12.575)
C6: (-2.539,-11.420,7.274)
C5: (-2.426,-12.069,8.522)
C4: (-1.256,-11.857,9.239)
P: (-3.348,-15.234,13.294)
C4': (0.114,-14.010,13.337)
C2': (-0.743,-11.886,12.741)
C2: (-0.431,-10.530,7.677)
N1: (-1.502,-10.642,6.875)
N3: (-0.210,-11.089,8.867)
N6: (-3.605,-11.531,6.472)
N7: (-3.281,-12.918,9.218)
N9: (-1.386,-12.590,10.402)
O5': (-2.226,-14.258,13.853)
O3': (1.556,-12.107,13.506)
OP2: (-3.035,-15.667,11.908)
C3': (0.214,-12.541,13.736)
C1': (-0.388,-12.667,11.479)
C5': (-0.927,-14.786,14.099)
O4': (-0.227,-14.009,11.919)
C8: (-2.621,-13.195,10.320)
O2': (-0.629,-10.486,12.575)
C6: (-2.539,-11.420,7.274)
C5: (-2.426,-12.069,8.522)
C4: (-1.256,-11.857,9.239)
P: (-3.348,-15.234,13.294)
C4': (0.114,-14.010,13.337)
C2': (-0.743,-11.886,12.741)
C2: (-0.431,-10.530,7.677)
N1: (-1.502,-10.642,6.875)
N3: (-0.210,-11.089,8.867)
N6: (-3.605,-11.531,6.472)
N7: (-3.281,-12.918,9.218)
N9: (-1.386,-12.590,10.402)
O5': (-2.226,-14.258,13.853)
O3': (1.556,-12.107,13.506)
Image (generated by PyMOL):