Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A208:A2312
Extra
PDB:
ATOM 1 O3' G A 207 89.705 -51.991 -87.042 1.00 74.06 O
ATOM 2 P A A 208 91.257 -52.027 -86.657 1.00 72.92 P
ATOM 3 OP1 A A 208 91.588 -53.373 -86.115 1.00 77.93 O
ATOM 4 OP2 A A 208 91.553 -50.812 -85.842 1.00 69.09 O
ATOM 5 O5' A A 208 91.952 -51.923 -88.087 1.00 69.31 O
ATOM 6 C5' A A 208 91.709 -52.928 -89.076 1.00 76.24 C
ATOM 7 C4' A A 208 92.366 -52.539 -90.362 1.00 76.11 C
ATOM 8 O4' A A 208 91.665 -51.396 -90.912 1.00 73.89 O
ATOM 9 C3' A A 208 93.812 -52.120 -90.149 1.00 80.08 C
ATOM 10 O3' A A 208 94.629 -52.619 -91.175 1.00 81.13 O
ATOM 11 C2' A A 208 93.753 -50.599 -90.120 1.00 80.86 C
ATOM 12 O2' A A 208 94.955 -49.991 -90.562 1.00 80.46 O
ATOM 13 C1' A A 208 92.538 -50.291 -91.004 1.00 75.22 C
ATOM 14 N9 A A 208 91.790 -49.119 -90.546 1.00 67.96 N
ATOM 15 C8 A A 208 91.386 -48.843 -89.261 1.00 64.88 C
ATOM 16 N7 A A 208 90.726 -47.719 -89.142 1.00 61.98 N
ATOM 17 C5 A A 208 90.690 -47.213 -90.433 1.00 66.54 C
ATOM 18 C6 A A 208 90.131 -46.043 -90.973 1.00 63.85 C
ATOM 19 N6 A A 208 89.482 -45.131 -90.244 1.00 61.30 N
ATOM 20 N1 A A 208 90.263 -45.837 -92.300 1.00 65.85 N
ATOM 21 C2 A A 208 90.924 -46.753 -93.028 1.00 72.63 C
ATOM 22 N3 A A 208 91.497 -47.893 -92.636 1.00 73.08 N
ATOM 23 C4 A A 208 91.342 -48.067 -91.311 1.00 71.49 C
ATOM 24 P A A 209 95.206 -54.103 -91.048 1.00 93.27 P
ATOM 25 OP1 A A 209 94.235 -54.897 -90.237 1.00 87.23 O
ATOM 26 OP2 A A 209 96.628 -54.011 -90.616 1.00 89.11 O
ATOM 27 O5' A A 209 95.123 -54.621 -92.546 1.00 85.33 O
TER
ATOM 1 O3' U B2311 93.646 -44.021 -84.721 1.00 55.42 O
ATOM 2 P G B2312 93.249 -43.869 -86.262 1.00 56.71 P
ATOM 3 OP1 G B2312 93.266 -42.433 -86.658 1.00 54.98 O
ATOM 4 OP2 G B2312 92.001 -44.664 -86.417 1.00 58.76 O
ATOM 5 O5' G B2312 94.423 -44.642 -87.014 1.00 54.03 O
ATOM 6 C5' G B2312 94.235 -45.967 -87.518 1.00 55.48 C
ATOM 7 C4' G B2312 94.614 -46.020 -88.990 1.00 63.98 C
ATOM 8 O4' G B2312 93.567 -45.453 -89.815 1.00 63.87 O
ATOM 9 C3' G B2312 95.895 -45.267 -89.325 1.00 62.09 C
ATOM 10 O3' G B2312 96.930 -46.245 -89.252 1.00 60.11 O
ATOM 11 C2' G B2312 95.665 -44.773 -90.756 1.00 64.62 C
ATOM 12 O2' G B2312 96.111 -45.658 -91.749 1.00 63.76 O
ATOM 13 C1' G B2312 94.136 -44.674 -90.840 1.00 61.43 C
ATOM 14 N9 G B2312 93.590 -43.330 -90.727 1.00 56.89 N
ATOM 15 C8 G B2312 92.760 -42.861 -89.743 1.00 56.02 C
ATOM 16 N7 G B2312 92.424 -41.618 -89.912 1.00 56.24 N
ATOM 17 C5 G B2312 93.072 -41.246 -91.076 1.00 53.75 C
ATOM 18 C6 G B2312 93.066 -40.025 -91.760 1.00 61.35 C
ATOM 19 O6 G B2312 92.470 -38.995 -91.467 1.00 69.96 O
ATOM 20 N1 G B2312 93.852 -40.068 -92.903 1.00 62.75 N
ATOM 21 C2 G B2312 94.545 -41.159 -93.334 1.00 65.59 C
ATOM 22 N2 G B2312 95.239 -41.007 -94.468 1.00 67.72 N
ATOM 23 N3 G B2312 94.554 -42.318 -92.701 1.00 62.22 N
ATOM 24 C4 G B2312 93.798 -42.287 -91.587 1.00 55.54 C
ATOM 25 P U B2313 98.445 -45.815 -88.954 1.00 63.80 P
ATOM 26 OP1 U B2313 99.212 -47.096 -89.002 1.00 56.38 O
ATOM 27 OP2 U B2313 98.542 -44.921 -87.760 1.00 61.65 O
ATOM 28 O5' U B2313 98.851 -44.965 -90.228 1.00 59.95 O
TER
ATOM 2 P A A 208 91.257 -52.027 -86.657 1.00 72.92 P
ATOM 3 OP1 A A 208 91.588 -53.373 -86.115 1.00 77.93 O
ATOM 4 OP2 A A 208 91.553 -50.812 -85.842 1.00 69.09 O
ATOM 5 O5' A A 208 91.952 -51.923 -88.087 1.00 69.31 O
ATOM 6 C5' A A 208 91.709 -52.928 -89.076 1.00 76.24 C
ATOM 7 C4' A A 208 92.366 -52.539 -90.362 1.00 76.11 C
ATOM 8 O4' A A 208 91.665 -51.396 -90.912 1.00 73.89 O
ATOM 9 C3' A A 208 93.812 -52.120 -90.149 1.00 80.08 C
ATOM 10 O3' A A 208 94.629 -52.619 -91.175 1.00 81.13 O
ATOM 11 C2' A A 208 93.753 -50.599 -90.120 1.00 80.86 C
ATOM 12 O2' A A 208 94.955 -49.991 -90.562 1.00 80.46 O
ATOM 13 C1' A A 208 92.538 -50.291 -91.004 1.00 75.22 C
ATOM 14 N9 A A 208 91.790 -49.119 -90.546 1.00 67.96 N
ATOM 15 C8 A A 208 91.386 -48.843 -89.261 1.00 64.88 C
ATOM 16 N7 A A 208 90.726 -47.719 -89.142 1.00 61.98 N
ATOM 17 C5 A A 208 90.690 -47.213 -90.433 1.00 66.54 C
ATOM 18 C6 A A 208 90.131 -46.043 -90.973 1.00 63.85 C
ATOM 19 N6 A A 208 89.482 -45.131 -90.244 1.00 61.30 N
ATOM 20 N1 A A 208 90.263 -45.837 -92.300 1.00 65.85 N
ATOM 21 C2 A A 208 90.924 -46.753 -93.028 1.00 72.63 C
ATOM 22 N3 A A 208 91.497 -47.893 -92.636 1.00 73.08 N
ATOM 23 C4 A A 208 91.342 -48.067 -91.311 1.00 71.49 C
ATOM 24 P A A 209 95.206 -54.103 -91.048 1.00 93.27 P
ATOM 25 OP1 A A 209 94.235 -54.897 -90.237 1.00 87.23 O
ATOM 26 OP2 A A 209 96.628 -54.011 -90.616 1.00 89.11 O
ATOM 27 O5' A A 209 95.123 -54.621 -92.546 1.00 85.33 O
TER
ATOM 1 O3' U B2311 93.646 -44.021 -84.721 1.00 55.42 O
ATOM 2 P G B2312 93.249 -43.869 -86.262 1.00 56.71 P
ATOM 3 OP1 G B2312 93.266 -42.433 -86.658 1.00 54.98 O
ATOM 4 OP2 G B2312 92.001 -44.664 -86.417 1.00 58.76 O
ATOM 5 O5' G B2312 94.423 -44.642 -87.014 1.00 54.03 O
ATOM 6 C5' G B2312 94.235 -45.967 -87.518 1.00 55.48 C
ATOM 7 C4' G B2312 94.614 -46.020 -88.990 1.00 63.98 C
ATOM 8 O4' G B2312 93.567 -45.453 -89.815 1.00 63.87 O
ATOM 9 C3' G B2312 95.895 -45.267 -89.325 1.00 62.09 C
ATOM 10 O3' G B2312 96.930 -46.245 -89.252 1.00 60.11 O
ATOM 11 C2' G B2312 95.665 -44.773 -90.756 1.00 64.62 C
ATOM 12 O2' G B2312 96.111 -45.658 -91.749 1.00 63.76 O
ATOM 13 C1' G B2312 94.136 -44.674 -90.840 1.00 61.43 C
ATOM 14 N9 G B2312 93.590 -43.330 -90.727 1.00 56.89 N
ATOM 15 C8 G B2312 92.760 -42.861 -89.743 1.00 56.02 C
ATOM 16 N7 G B2312 92.424 -41.618 -89.912 1.00 56.24 N
ATOM 17 C5 G B2312 93.072 -41.246 -91.076 1.00 53.75 C
ATOM 18 C6 G B2312 93.066 -40.025 -91.760 1.00 61.35 C
ATOM 19 O6 G B2312 92.470 -38.995 -91.467 1.00 69.96 O
ATOM 20 N1 G B2312 93.852 -40.068 -92.903 1.00 62.75 N
ATOM 21 C2 G B2312 94.545 -41.159 -93.334 1.00 65.59 C
ATOM 22 N2 G B2312 95.239 -41.007 -94.468 1.00 67.72 N
ATOM 23 N3 G B2312 94.554 -42.318 -92.701 1.00 62.22 N
ATOM 24 C4 G B2312 93.798 -42.287 -91.587 1.00 55.54 C
ATOM 25 P U B2313 98.445 -45.815 -88.954 1.00 63.80 P
ATOM 26 OP1 U B2313 99.212 -47.096 -89.002 1.00 56.38 O
ATOM 27 OP2 U B2313 98.542 -44.921 -87.760 1.00 61.65 O
ATOM 28 O5' U B2313 98.851 -44.965 -90.228 1.00 59.95 O
TER
Atoms:
OP1: (91.588,-53.373,-86.115)
OP2: (91.553,-50.812,-85.842)
C3': (93.812,-52.120,-90.149)
C1': (92.538,-50.291,-91.004)
C5': (91.709,-52.928,-89.076)
O4': (91.665,-51.396,-90.912)
C8: (91.386,-48.843,-89.261)
O2': (94.955,-49.991,-90.562)
C6: (90.131,-46.043,-90.973)
C5: (90.690,-47.213,-90.433)
C4: (91.342,-48.067,-91.311)
P: (91.257,-52.027,-86.657)
C4': (92.366,-52.539,-90.362)
C2': (93.753,-50.599,-90.120)
C2: (90.924,-46.753,-93.028)
N1: (90.263,-45.837,-92.300)
N3: (91.497,-47.893,-92.636)
N6: (89.482,-45.131,-90.244)
N7: (90.726,-47.719,-89.142)
N9: (91.790,-49.119,-90.546)
O5': (91.952,-51.923,-88.087)
O3': (94.629,-52.619,-91.175)
OP2: (91.553,-50.812,-85.842)
C3': (93.812,-52.120,-90.149)
C1': (92.538,-50.291,-91.004)
C5': (91.709,-52.928,-89.076)
O4': (91.665,-51.396,-90.912)
C8: (91.386,-48.843,-89.261)
O2': (94.955,-49.991,-90.562)
C6: (90.131,-46.043,-90.973)
C5: (90.690,-47.213,-90.433)
C4: (91.342,-48.067,-91.311)
P: (91.257,-52.027,-86.657)
C4': (92.366,-52.539,-90.362)
C2': (93.753,-50.599,-90.120)
C2: (90.924,-46.753,-93.028)
N1: (90.263,-45.837,-92.300)
N3: (91.497,-47.893,-92.636)
N6: (89.482,-45.131,-90.244)
N7: (90.726,-47.719,-89.142)
N9: (91.790,-49.119,-90.546)
O5': (91.952,-51.923,-88.087)
O3': (94.629,-52.619,-91.175)
OP1: (93.266,-42.433,-86.658)
OP2: (92.001,-44.664,-86.417)
C3': (95.895,-45.267,-89.325)
C1': (94.136,-44.674,-90.840)
C5': (94.235,-45.967,-87.518)
O6: (92.470,-38.995,-91.467)
O4': (93.567,-45.453,-89.815)
C8: (92.760,-42.861,-89.743)
C2: (94.545,-41.159,-93.334)
C6: (93.066,-40.025,-91.760)
C5: (93.072,-41.246,-91.076)
C4: (93.798,-42.287,-91.587)
P: (93.249,-43.869,-86.262)
C4': (94.614,-46.020,-88.990)
C2': (95.665,-44.773,-90.756)
O2': (96.111,-45.658,-91.749)
N1: (93.852,-40.068,-92.903)
N2: (95.239,-41.007,-94.468)
N3: (94.554,-42.318,-92.701)
N7: (92.424,-41.618,-89.912)
N9: (93.590,-43.330,-90.727)
O5': (94.423,-44.642,-87.014)
O3': (96.930,-46.245,-89.252)
OP2: (92.001,-44.664,-86.417)
C3': (95.895,-45.267,-89.325)
C1': (94.136,-44.674,-90.840)
C5': (94.235,-45.967,-87.518)
O6: (92.470,-38.995,-91.467)
O4': (93.567,-45.453,-89.815)
C8: (92.760,-42.861,-89.743)
C2: (94.545,-41.159,-93.334)
C6: (93.066,-40.025,-91.760)
C5: (93.072,-41.246,-91.076)
C4: (93.798,-42.287,-91.587)
P: (93.249,-43.869,-86.262)
C4': (94.614,-46.020,-88.990)
C2': (95.665,-44.773,-90.756)
O2': (96.111,-45.658,-91.749)
N1: (93.852,-40.068,-92.903)
N2: (95.239,-41.007,-94.468)
N3: (94.554,-42.318,-92.701)
N7: (92.424,-41.618,-89.912)
N9: (93.590,-43.330,-90.727)
O5': (94.423,-44.642,-87.014)
O3': (96.930,-46.245,-89.252)
Image (generated by PyMOL):