Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:168:12530
Extra
PDB:
ATOM 1 O3' A A 67 58.967 -58.349 107.465 1.00 48.44 O
ATOM 2 P A A 68 58.447 -59.179 106.227 1.00 51.02 P
ATOM 3 OP1 A A 68 59.515 -59.206 105.207 1.00 50.91 O
ATOM 4 OP2 A A 68 57.155 -58.601 105.873 1.00 50.61 O
ATOM 5 O5' A A 68 58.254 -60.615 106.858 1.00 51.61 O
ATOM 6 C5' A A 68 59.314 -61.229 107.587 1.00 52.13 C
ATOM 7 C4' A A 68 58.902 -62.565 108.103 1.00 52.64 C
ATOM 8 O4' A A 68 58.034 -62.352 109.248 1.00 52.77 O
ATOM 9 C3' A A 68 58.096 -63.390 107.096 1.00 52.56 C
ATOM 10 O3' A A 68 58.372 -64.776 107.254 1.00 53.10 O
ATOM 11 C2' A A 68 56.663 -63.116 107.505 1.00 52.40 C
ATOM 12 O2' A A 68 55.753 -64.135 107.173 1.00 52.56 O
ATOM 13 C1' A A 68 56.780 -62.965 109.013 1.00 52.76 C
ATOM 14 N9 A A 68 55.708 -62.145 109.562 1.00 52.52 N
ATOM 15 C8 A A 68 55.318 -60.909 109.153 1.00 51.97 C
ATOM 16 N7 A A 68 54.240 -60.466 109.751 1.00 51.88 N
ATOM 17 C5 A A 68 53.866 -61.486 110.567 1.00 52.38 C
ATOM 18 C6 A A 68 52.780 -61.643 111.447 1.00 52.57 C
ATOM 19 N6 A A 68 51.829 -60.737 111.678 1.00 52.25 N
ATOM 20 N1 A A 68 52.699 -62.806 112.123 1.00 53.13 N
ATOM 21 C2 A A 68 53.647 -63.724 111.891 1.00 53.46 C
ATOM 22 N3 A A 68 54.701 -63.699 111.062 1.00 53.33 N
ATOM 23 C4 A A 68 54.749 -62.535 110.425 1.00 52.78 C
ATOM 24 P C A 69 59.383 -65.520 106.266 1.00 52.67 P
ATOM 25 OP1 C A 69 59.225 -64.920 104.896 1.00 52.10 O
ATOM 26 OP2 C A 69 59.171 -66.967 106.449 1.00 53.20 O
ATOM 27 O5' C A 69 60.788 -65.094 106.854 1.00 52.85 O
TER
ATOM 1 O3' G B2529 50.677 -60.283 105.179 1.00 67.06 O
ATOM 2 P G B2530 49.837 -60.648 106.454 1.00 47.00 P
ATOM 3 OP1 G B2530 48.488 -60.647 106.053 1.00 46.80 O
ATOM 4 OP2 G B2530 50.240 -59.730 107.539 1.00 47.02 O
ATOM 5 O5' G B2530 50.326 -62.115 106.761 1.00 47.59 O
ATOM 6 C5' G B2530 51.708 -62.436 106.695 1.00 47.79 C
ATOM 7 C4' G B2530 52.005 -63.663 107.493 1.00 48.43 C
ATOM 8 O4' G B2530 51.686 -63.406 108.883 1.00 48.67 O
ATOM 9 C3' G B2530 51.159 -64.873 107.149 1.00 48.67 C
ATOM 10 O3' G B2530 51.626 -65.594 106.030 1.00 48.69 O
ATOM 11 C2' G B2530 51.183 -65.671 108.432 1.00 49.28 C
ATOM 12 O2' G B2530 52.416 -66.383 108.553 1.00 49.67 O
ATOM 13 C1' G B2530 51.155 -64.565 109.466 1.00 49.17 C
ATOM 14 N9 G B2530 49.803 -64.278 109.985 1.00 49.09 N
ATOM 15 C8 G B2530 49.147 -63.078 110.068 1.00 48.66 C
ATOM 16 N7 G B2530 48.009 -63.158 110.703 1.00 48.76 N
ATOM 17 C5 G B2530 47.943 -64.497 111.087 1.00 49.31 C
ATOM 18 C6 G B2530 46.951 -65.233 111.797 1.00 49.68 C
ATOM 19 O6 G B2530 45.883 -64.843 112.285 1.00 49.60 O
ATOM 20 N1 G B2530 47.271 -66.567 111.969 1.00 50.21 N
ATOM 21 C2 G B2530 48.411 -67.146 111.491 1.00 50.37 C
ATOM 22 N2 G B2530 48.564 -68.461 111.741 1.00 50.92 N
ATOM 23 N3 G B2530 49.316 -66.478 110.801 1.00 50.02 N
ATOM 24 C4 G B2530 49.027 -65.182 110.647 1.00 49.51 C
ATOM 25 P A B2531 50.567 -66.177 104.994 1.00 65.80 P
ATOM 26 OP1 A B2531 51.148 -66.004 103.656 1.00 65.48 O
ATOM 27 OP2 A B2531 49.289 -65.522 105.308 1.00 65.55 O
ATOM 28 O5' A B2531 50.466 -67.729 105.353 1.00 66.43 O
TER
ATOM 2 P A A 68 58.447 -59.179 106.227 1.00 51.02 P
ATOM 3 OP1 A A 68 59.515 -59.206 105.207 1.00 50.91 O
ATOM 4 OP2 A A 68 57.155 -58.601 105.873 1.00 50.61 O
ATOM 5 O5' A A 68 58.254 -60.615 106.858 1.00 51.61 O
ATOM 6 C5' A A 68 59.314 -61.229 107.587 1.00 52.13 C
ATOM 7 C4' A A 68 58.902 -62.565 108.103 1.00 52.64 C
ATOM 8 O4' A A 68 58.034 -62.352 109.248 1.00 52.77 O
ATOM 9 C3' A A 68 58.096 -63.390 107.096 1.00 52.56 C
ATOM 10 O3' A A 68 58.372 -64.776 107.254 1.00 53.10 O
ATOM 11 C2' A A 68 56.663 -63.116 107.505 1.00 52.40 C
ATOM 12 O2' A A 68 55.753 -64.135 107.173 1.00 52.56 O
ATOM 13 C1' A A 68 56.780 -62.965 109.013 1.00 52.76 C
ATOM 14 N9 A A 68 55.708 -62.145 109.562 1.00 52.52 N
ATOM 15 C8 A A 68 55.318 -60.909 109.153 1.00 51.97 C
ATOM 16 N7 A A 68 54.240 -60.466 109.751 1.00 51.88 N
ATOM 17 C5 A A 68 53.866 -61.486 110.567 1.00 52.38 C
ATOM 18 C6 A A 68 52.780 -61.643 111.447 1.00 52.57 C
ATOM 19 N6 A A 68 51.829 -60.737 111.678 1.00 52.25 N
ATOM 20 N1 A A 68 52.699 -62.806 112.123 1.00 53.13 N
ATOM 21 C2 A A 68 53.647 -63.724 111.891 1.00 53.46 C
ATOM 22 N3 A A 68 54.701 -63.699 111.062 1.00 53.33 N
ATOM 23 C4 A A 68 54.749 -62.535 110.425 1.00 52.78 C
ATOM 24 P C A 69 59.383 -65.520 106.266 1.00 52.67 P
ATOM 25 OP1 C A 69 59.225 -64.920 104.896 1.00 52.10 O
ATOM 26 OP2 C A 69 59.171 -66.967 106.449 1.00 53.20 O
ATOM 27 O5' C A 69 60.788 -65.094 106.854 1.00 52.85 O
TER
ATOM 1 O3' G B2529 50.677 -60.283 105.179 1.00 67.06 O
ATOM 2 P G B2530 49.837 -60.648 106.454 1.00 47.00 P
ATOM 3 OP1 G B2530 48.488 -60.647 106.053 1.00 46.80 O
ATOM 4 OP2 G B2530 50.240 -59.730 107.539 1.00 47.02 O
ATOM 5 O5' G B2530 50.326 -62.115 106.761 1.00 47.59 O
ATOM 6 C5' G B2530 51.708 -62.436 106.695 1.00 47.79 C
ATOM 7 C4' G B2530 52.005 -63.663 107.493 1.00 48.43 C
ATOM 8 O4' G B2530 51.686 -63.406 108.883 1.00 48.67 O
ATOM 9 C3' G B2530 51.159 -64.873 107.149 1.00 48.67 C
ATOM 10 O3' G B2530 51.626 -65.594 106.030 1.00 48.69 O
ATOM 11 C2' G B2530 51.183 -65.671 108.432 1.00 49.28 C
ATOM 12 O2' G B2530 52.416 -66.383 108.553 1.00 49.67 O
ATOM 13 C1' G B2530 51.155 -64.565 109.466 1.00 49.17 C
ATOM 14 N9 G B2530 49.803 -64.278 109.985 1.00 49.09 N
ATOM 15 C8 G B2530 49.147 -63.078 110.068 1.00 48.66 C
ATOM 16 N7 G B2530 48.009 -63.158 110.703 1.00 48.76 N
ATOM 17 C5 G B2530 47.943 -64.497 111.087 1.00 49.31 C
ATOM 18 C6 G B2530 46.951 -65.233 111.797 1.00 49.68 C
ATOM 19 O6 G B2530 45.883 -64.843 112.285 1.00 49.60 O
ATOM 20 N1 G B2530 47.271 -66.567 111.969 1.00 50.21 N
ATOM 21 C2 G B2530 48.411 -67.146 111.491 1.00 50.37 C
ATOM 22 N2 G B2530 48.564 -68.461 111.741 1.00 50.92 N
ATOM 23 N3 G B2530 49.316 -66.478 110.801 1.00 50.02 N
ATOM 24 C4 G B2530 49.027 -65.182 110.647 1.00 49.51 C
ATOM 25 P A B2531 50.567 -66.177 104.994 1.00 65.80 P
ATOM 26 OP1 A B2531 51.148 -66.004 103.656 1.00 65.48 O
ATOM 27 OP2 A B2531 49.289 -65.522 105.308 1.00 65.55 O
ATOM 28 O5' A B2531 50.466 -67.729 105.353 1.00 66.43 O
TER
Atoms:
OP1: (59.515,-59.206,105.207)
OP2: (57.155,-58.601,105.873)
C3': (58.096,-63.390,107.096)
C1': (56.780,-62.965,109.013)
C5': (59.314,-61.229,107.587)
O4': (58.034,-62.352,109.248)
C8: (55.318,-60.909,109.153)
O2': (55.753,-64.135,107.173)
C6: (52.780,-61.643,111.447)
C5: (53.866,-61.486,110.567)
C4: (54.749,-62.535,110.425)
P: (58.447,-59.179,106.227)
C4': (58.902,-62.565,108.103)
C2': (56.663,-63.116,107.505)
C2: (53.647,-63.724,111.891)
N1: (52.699,-62.806,112.123)
N3: (54.701,-63.699,111.062)
N6: (51.829,-60.737,111.678)
N7: (54.240,-60.466,109.751)
N9: (55.708,-62.145,109.562)
O5': (58.254,-60.615,106.858)
O3': (58.372,-64.776,107.254)
OP2: (57.155,-58.601,105.873)
C3': (58.096,-63.390,107.096)
C1': (56.780,-62.965,109.013)
C5': (59.314,-61.229,107.587)
O4': (58.034,-62.352,109.248)
C8: (55.318,-60.909,109.153)
O2': (55.753,-64.135,107.173)
C6: (52.780,-61.643,111.447)
C5: (53.866,-61.486,110.567)
C4: (54.749,-62.535,110.425)
P: (58.447,-59.179,106.227)
C4': (58.902,-62.565,108.103)
C2': (56.663,-63.116,107.505)
C2: (53.647,-63.724,111.891)
N1: (52.699,-62.806,112.123)
N3: (54.701,-63.699,111.062)
N6: (51.829,-60.737,111.678)
N7: (54.240,-60.466,109.751)
N9: (55.708,-62.145,109.562)
O5': (58.254,-60.615,106.858)
O3': (58.372,-64.776,107.254)
OP1: (48.488,-60.647,106.053)
OP2: (50.240,-59.730,107.539)
C3': (51.159,-64.873,107.149)
C1': (51.155,-64.565,109.466)
C5': (51.708,-62.436,106.695)
O6: (45.883,-64.843,112.285)
O4': (51.686,-63.406,108.883)
C8: (49.147,-63.078,110.068)
C2: (48.411,-67.146,111.491)
C6: (46.951,-65.233,111.797)
C5: (47.943,-64.497,111.087)
C4: (49.027,-65.182,110.647)
P: (49.837,-60.648,106.454)
C4': (52.005,-63.663,107.493)
C2': (51.183,-65.671,108.432)
O2': (52.416,-66.383,108.553)
N1: (47.271,-66.567,111.969)
N2: (48.564,-68.461,111.741)
N3: (49.316,-66.478,110.801)
N7: (48.009,-63.158,110.703)
N9: (49.803,-64.278,109.985)
O5': (50.326,-62.115,106.761)
O3': (51.626,-65.594,106.030)
OP2: (50.240,-59.730,107.539)
C3': (51.159,-64.873,107.149)
C1': (51.155,-64.565,109.466)
C5': (51.708,-62.436,106.695)
O6: (45.883,-64.843,112.285)
O4': (51.686,-63.406,108.883)
C8: (49.147,-63.078,110.068)
C2: (48.411,-67.146,111.491)
C6: (46.951,-65.233,111.797)
C5: (47.943,-64.497,111.087)
C4: (49.027,-65.182,110.647)
P: (49.837,-60.648,106.454)
C4': (52.005,-63.663,107.493)
C2': (51.183,-65.671,108.432)
O2': (52.416,-66.383,108.553)
N1: (47.271,-66.567,111.969)
N2: (48.564,-68.461,111.741)
N3: (49.316,-66.478,110.801)
N7: (48.009,-63.158,110.703)
N9: (49.803,-64.278,109.985)
O5': (50.326,-62.115,106.761)
O3': (51.626,-65.594,106.030)
Image (generated by PyMOL):