Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ5:01087:02016
Extra
PDB:
ATOM 1 O3' C A1086 49.251 101.371 115.323 1.00 51.31 O
ATOM 2 P U A1087 48.046 101.089 116.359 1.00 50.59 P
ATOM 3 OP1 U A1087 48.607 101.104 117.731 1.00 52.01 O
ATOM 4 OP2 U A1087 47.327 99.884 115.882 1.00 48.27 O
ATOM 5 O5' U A1087 47.104 102.362 116.222 1.00 49.70 O
ATOM 6 C5' U A1087 47.577 103.665 116.581 1.00 49.79 C
ATOM 7 C4' U A1087 46.486 104.686 116.388 1.00 52.24 C
ATOM 8 O4' U A1087 46.199 104.825 114.966 1.00 53.61 O
ATOM 9 C3' U A1087 45.152 104.354 117.054 1.00 53.33 C
ATOM 10 O3' U A1087 44.541 105.552 117.491 1.00 54.30 O
ATOM 11 C2' U A1087 44.340 103.781 115.900 1.00 53.74 C
ATOM 12 O2' U A1087 42.946 103.888 116.082 1.00 55.06 O
ATOM 13 C1' U A1087 44.811 104.674 114.760 1.00 52.79 C
ATOM 14 N1 U A1087 44.568 104.175 113.398 1.00 52.12 N
ATOM 15 C2 U A1087 44.027 105.070 112.483 1.00 51.63 C
ATOM 16 O2 U A1087 43.761 106.228 112.757 1.00 50.61 O
ATOM 17 N3 U A1087 43.807 104.558 111.233 1.00 51.85 N
ATOM 18 C4 U A1087 44.057 103.277 110.806 1.00 52.55 C
ATOM 19 O4 U A1087 43.796 102.976 109.643 1.00 54.71 O
ATOM 20 C5 U A1087 44.615 102.408 111.802 1.00 52.13 C
ATOM 21 C6 U A1087 44.851 102.877 113.032 1.00 52.27 C
ATOM 22 P C A1088 44.497 105.888 119.055 1.00 56.22 P
ATOM 23 OP1 C A1088 43.823 107.208 119.221 1.00 56.73 O
ATOM 24 OP2 C A1088 45.872 105.695 119.589 1.00 55.32 O
ATOM 25 O5' C A1088 43.548 104.755 119.654 1.00 55.35 O
TER
ATOM 1 O3' U B2015 42.042 108.517 110.087 1.00 35.54 O
ATOM 2 P G B2016 43.245 107.849 109.269 1.00 34.88 P
ATOM 3 OP1 G B2016 42.879 106.420 109.129 1.00 38.03 O
ATOM 4 OP2 G B2016 44.522 108.219 109.915 1.00 37.30 O
ATOM 5 O5' G B2016 43.214 108.551 107.839 1.00 37.27 O
ATOM 6 C5' G B2016 42.124 108.368 106.920 1.00 33.65 C
ATOM 7 C4' G B2016 42.242 109.364 105.788 1.00 35.23 C
ATOM 8 O4' G B2016 42.195 110.713 106.325 1.00 35.63 O
ATOM 9 C3' G B2016 43.561 109.317 105.039 1.00 34.38 C
ATOM 10 O3' G B2016 43.553 108.284 104.064 1.00 36.47 O
ATOM 11 C2' G B2016 43.664 110.719 104.447 1.00 35.20 C
ATOM 12 O2' G B2016 42.926 110.941 103.271 1.00 35.50 O
ATOM 13 C1' G B2016 43.035 111.564 105.553 1.00 36.33 C
ATOM 14 N9 G B2016 44.030 112.184 106.422 1.00 37.57 N
ATOM 15 C8 G B2016 44.585 111.663 107.567 1.00 37.12 C
ATOM 16 N7 G B2016 45.464 112.457 108.117 1.00 37.33 N
ATOM 17 C5 G B2016 45.496 113.566 107.287 1.00 36.82 C
ATOM 18 C6 G B2016 46.271 114.749 107.363 1.00 36.19 C
ATOM 19 O6 G B2016 47.121 115.055 108.197 1.00 38.27 O
ATOM 20 N1 G B2016 45.979 115.621 106.320 1.00 34.13 N
ATOM 21 C2 G B2016 45.068 115.382 105.329 1.00 33.01 C
ATOM 22 N2 G B2016 44.918 116.345 104.424 1.00 34.90 N
ATOM 23 N3 G B2016 44.352 114.279 105.234 1.00 35.06 N
ATOM 24 C4 G B2016 44.612 113.420 106.240 1.00 37.41 C
ATOM 25 P C B2017 44.822 107.302 103.923 1.00 38.50 P
ATOM 26 OP1 C B2017 44.399 106.220 103.016 1.00 33.16 O
ATOM 27 OP2 C B2017 45.322 106.962 105.278 1.00 38.56 O
ATOM 28 O5' C B2017 45.922 108.203 103.198 1.00 38.39 O
TER
ATOM 2 P U A1087 48.046 101.089 116.359 1.00 50.59 P
ATOM 3 OP1 U A1087 48.607 101.104 117.731 1.00 52.01 O
ATOM 4 OP2 U A1087 47.327 99.884 115.882 1.00 48.27 O
ATOM 5 O5' U A1087 47.104 102.362 116.222 1.00 49.70 O
ATOM 6 C5' U A1087 47.577 103.665 116.581 1.00 49.79 C
ATOM 7 C4' U A1087 46.486 104.686 116.388 1.00 52.24 C
ATOM 8 O4' U A1087 46.199 104.825 114.966 1.00 53.61 O
ATOM 9 C3' U A1087 45.152 104.354 117.054 1.00 53.33 C
ATOM 10 O3' U A1087 44.541 105.552 117.491 1.00 54.30 O
ATOM 11 C2' U A1087 44.340 103.781 115.900 1.00 53.74 C
ATOM 12 O2' U A1087 42.946 103.888 116.082 1.00 55.06 O
ATOM 13 C1' U A1087 44.811 104.674 114.760 1.00 52.79 C
ATOM 14 N1 U A1087 44.568 104.175 113.398 1.00 52.12 N
ATOM 15 C2 U A1087 44.027 105.070 112.483 1.00 51.63 C
ATOM 16 O2 U A1087 43.761 106.228 112.757 1.00 50.61 O
ATOM 17 N3 U A1087 43.807 104.558 111.233 1.00 51.85 N
ATOM 18 C4 U A1087 44.057 103.277 110.806 1.00 52.55 C
ATOM 19 O4 U A1087 43.796 102.976 109.643 1.00 54.71 O
ATOM 20 C5 U A1087 44.615 102.408 111.802 1.00 52.13 C
ATOM 21 C6 U A1087 44.851 102.877 113.032 1.00 52.27 C
ATOM 22 P C A1088 44.497 105.888 119.055 1.00 56.22 P
ATOM 23 OP1 C A1088 43.823 107.208 119.221 1.00 56.73 O
ATOM 24 OP2 C A1088 45.872 105.695 119.589 1.00 55.32 O
ATOM 25 O5' C A1088 43.548 104.755 119.654 1.00 55.35 O
TER
ATOM 1 O3' U B2015 42.042 108.517 110.087 1.00 35.54 O
ATOM 2 P G B2016 43.245 107.849 109.269 1.00 34.88 P
ATOM 3 OP1 G B2016 42.879 106.420 109.129 1.00 38.03 O
ATOM 4 OP2 G B2016 44.522 108.219 109.915 1.00 37.30 O
ATOM 5 O5' G B2016 43.214 108.551 107.839 1.00 37.27 O
ATOM 6 C5' G B2016 42.124 108.368 106.920 1.00 33.65 C
ATOM 7 C4' G B2016 42.242 109.364 105.788 1.00 35.23 C
ATOM 8 O4' G B2016 42.195 110.713 106.325 1.00 35.63 O
ATOM 9 C3' G B2016 43.561 109.317 105.039 1.00 34.38 C
ATOM 10 O3' G B2016 43.553 108.284 104.064 1.00 36.47 O
ATOM 11 C2' G B2016 43.664 110.719 104.447 1.00 35.20 C
ATOM 12 O2' G B2016 42.926 110.941 103.271 1.00 35.50 O
ATOM 13 C1' G B2016 43.035 111.564 105.553 1.00 36.33 C
ATOM 14 N9 G B2016 44.030 112.184 106.422 1.00 37.57 N
ATOM 15 C8 G B2016 44.585 111.663 107.567 1.00 37.12 C
ATOM 16 N7 G B2016 45.464 112.457 108.117 1.00 37.33 N
ATOM 17 C5 G B2016 45.496 113.566 107.287 1.00 36.82 C
ATOM 18 C6 G B2016 46.271 114.749 107.363 1.00 36.19 C
ATOM 19 O6 G B2016 47.121 115.055 108.197 1.00 38.27 O
ATOM 20 N1 G B2016 45.979 115.621 106.320 1.00 34.13 N
ATOM 21 C2 G B2016 45.068 115.382 105.329 1.00 33.01 C
ATOM 22 N2 G B2016 44.918 116.345 104.424 1.00 34.90 N
ATOM 23 N3 G B2016 44.352 114.279 105.234 1.00 35.06 N
ATOM 24 C4 G B2016 44.612 113.420 106.240 1.00 37.41 C
ATOM 25 P C B2017 44.822 107.302 103.923 1.00 38.50 P
ATOM 26 OP1 C B2017 44.399 106.220 103.016 1.00 33.16 O
ATOM 27 OP2 C B2017 45.322 106.962 105.278 1.00 38.56 O
ATOM 28 O5' C B2017 45.922 108.203 103.198 1.00 38.39 O
TER
Atoms:
C4: (44.057,103.277,110.806)
N3: (43.807,104.558,111.233)
OP1: (48.607,101.104,117.731)
OP2: (47.327,99.884,115.882)
C2: (44.027,105.070,112.483)
C1': (44.811,104.674,114.760)
C3': (45.152,104.354,117.054)
O5': (47.104,102.362,116.222)
O4': (46.199,104.825,114.966)
C5': (47.577,103.665,116.581)
P: (48.046,101.089,116.359)
C4': (46.486,104.686,116.388)
C2': (44.340,103.781,115.900)
O2': (42.946,103.888,116.082)
N1: (44.568,104.175,113.398)
O4: (43.796,102.976,109.643)
O2: (43.761,106.228,112.757)
C6: (44.851,102.877,113.032)
C5: (44.615,102.408,111.802)
O3': (44.541,105.552,117.491)
N3: (43.807,104.558,111.233)
OP1: (48.607,101.104,117.731)
OP2: (47.327,99.884,115.882)
C2: (44.027,105.070,112.483)
C1': (44.811,104.674,114.760)
C3': (45.152,104.354,117.054)
O5': (47.104,102.362,116.222)
O4': (46.199,104.825,114.966)
C5': (47.577,103.665,116.581)
P: (48.046,101.089,116.359)
C4': (46.486,104.686,116.388)
C2': (44.340,103.781,115.900)
O2': (42.946,103.888,116.082)
N1: (44.568,104.175,113.398)
O4: (43.796,102.976,109.643)
O2: (43.761,106.228,112.757)
C6: (44.851,102.877,113.032)
C5: (44.615,102.408,111.802)
O3': (44.541,105.552,117.491)
OP1: (42.879,106.420,109.129)
OP2: (44.522,108.219,109.915)
C3': (43.561,109.317,105.039)
C1': (43.035,111.564,105.553)
C5': (42.124,108.368,106.920)
O6: (47.121,115.055,108.197)
O4': (42.195,110.713,106.325)
C8: (44.585,111.663,107.567)
C2: (45.068,115.382,105.329)
C6: (46.271,114.749,107.363)
C5: (45.496,113.566,107.287)
C4: (44.612,113.420,106.240)
P: (43.245,107.849,109.269)
C4': (42.242,109.364,105.788)
C2': (43.664,110.719,104.447)
O2': (42.926,110.941,103.271)
N1: (45.979,115.621,106.320)
N2: (44.918,116.345,104.424)
N3: (44.352,114.279,105.234)
N7: (45.464,112.457,108.117)
N9: (44.030,112.184,106.422)
O5': (43.214,108.551,107.839)
O3': (43.553,108.284,104.064)
OP2: (44.522,108.219,109.915)
C3': (43.561,109.317,105.039)
C1': (43.035,111.564,105.553)
C5': (42.124,108.368,106.920)
O6: (47.121,115.055,108.197)
O4': (42.195,110.713,106.325)
C8: (44.585,111.663,107.567)
C2: (45.068,115.382,105.329)
C6: (46.271,114.749,107.363)
C5: (45.496,113.566,107.287)
C4: (44.612,113.420,106.240)
P: (43.245,107.849,109.269)
C4': (42.242,109.364,105.788)
C2': (43.664,110.719,104.447)
O2': (42.926,110.941,103.271)
N1: (45.979,115.621,106.320)
N2: (44.918,116.345,104.424)
N3: (44.352,114.279,105.234)
N7: (45.464,112.457,108.117)
N9: (44.030,112.184,106.422)
O5': (43.214,108.551,107.839)
O3': (43.553,108.284,104.064)
Image (generated by PyMOL):