Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0891:01313
Extra
PDB:
ATOM 1 O3' U A 890 39.696 114.095 72.823 1.00 24.10 O
ATOM 2 P U A 891 38.581 113.281 73.648 1.00 25.67 P
ATOM 3 OP1 U A 891 38.952 113.226 75.080 1.00 25.41 O
ATOM 4 OP2 U A 891 38.286 112.024 72.930 1.00 26.12 O
ATOM 5 O5' U A 891 37.292 114.193 73.507 1.00 24.68 O
ATOM 6 C5' U A 891 37.109 115.365 74.305 1.00 24.10 C
ATOM 7 C4' U A 891 36.134 116.286 73.623 1.00 26.39 C
ATOM 8 O4' U A 891 36.820 117.025 72.577 1.00 27.16 O
ATOM 9 C3' U A 891 34.960 115.575 72.949 1.00 26.15 C
ATOM 10 O3' U A 891 33.790 116.356 73.027 1.00 26.07 O
ATOM 11 C2' U A 891 35.411 115.484 71.501 1.00 25.88 C
ATOM 12 O2' U A 891 34.320 115.394 70.610 1.00 23.95 O
ATOM 13 C1' U A 891 36.174 116.798 71.343 1.00 27.80 C
ATOM 14 N1 U A 891 37.190 116.738 70.285 1.00 29.06 N
ATOM 15 C2 U A 891 36.887 117.340 69.080 1.00 29.20 C
ATOM 16 O2 U A 891 35.861 117.959 68.892 1.00 29.87 O
ATOM 17 N3 U A 891 37.838 117.198 68.105 1.00 29.96 N
ATOM 18 C4 U A 891 39.045 116.547 68.215 1.00 30.34 C
ATOM 19 O4 U A 891 39.779 116.473 67.232 1.00 31.99 O
ATOM 20 C5 U A 891 39.303 115.978 69.504 1.00 31.26 C
ATOM 21 C6 U A 891 38.388 116.089 70.472 1.00 29.68 C
ATOM 22 P C A 892 32.699 116.014 74.140 1.00 29.68 P
ATOM 23 OP1 C A 892 31.603 117.003 74.014 1.00 28.60 O
ATOM 24 OP2 C A 892 33.413 115.873 75.425 1.00 27.62 O
ATOM 25 O5' C A 892 32.172 114.566 73.739 1.00 30.32 O
TER
ATOM 1 O3' C B1312 35.014 118.231 63.863 1.00 29.31 O
ATOM 2 P G B1313 35.517 117.519 65.206 1.00 27.20 P
ATOM 3 OP1 G B1313 36.798 118.166 65.574 1.00 27.68 O
ATOM 4 OP2 G B1313 35.460 116.041 65.052 1.00 24.24 O
ATOM 5 O5' G B1313 34.427 117.982 66.269 1.00 23.41 O
ATOM 6 C5' G B1313 33.966 119.348 66.310 1.00 21.91 C
ATOM 7 C4' G B1313 32.802 119.472 67.265 1.00 25.85 C
ATOM 8 O4' G B1313 31.771 118.541 66.835 1.00 29.75 O
ATOM 9 C3' G B1313 33.096 119.104 68.717 1.00 26.25 C
ATOM 10 O3' G B1313 32.146 119.755 69.547 1.00 24.99 O
ATOM 11 C2' G B1313 32.784 117.616 68.737 1.00 27.43 C
ATOM 12 O2' G B1313 32.477 117.137 70.025 1.00 28.51 O
ATOM 13 C1' G B1313 31.545 117.584 67.847 1.00 28.56 C
ATOM 14 N9 G B1313 31.273 116.300 67.219 1.00 29.58 N
ATOM 15 C8 G B1313 32.125 115.537 66.454 1.00 30.40 C
ATOM 16 N7 G B1313 31.580 114.422 66.045 1.00 31.30 N
ATOM 17 C5 G B1313 30.294 114.453 66.573 1.00 30.77 C
ATOM 18 C6 G B1313 29.239 113.517 66.474 1.00 29.55 C
ATOM 19 O6 G B1313 29.225 112.444 65.881 1.00 32.59 O
ATOM 20 N1 G B1313 28.108 113.943 67.157 1.00 29.07 N
ATOM 21 C2 G B1313 28.000 115.128 67.840 1.00 31.06 C
ATOM 22 N2 G B1313 26.816 115.371 68.427 1.00 30.60 N
ATOM 23 N3 G B1313 28.978 116.014 67.941 1.00 30.25 N
ATOM 24 C4 G B1313 30.089 115.611 67.291 1.00 30.19 C
ATOM 25 P A B1314 32.530 121.118 70.292 1.00 29.50 P
ATOM 26 OP1 A B1314 31.313 121.641 70.964 1.00 25.99 O
ATOM 27 OP2 A B1314 33.236 121.960 69.284 1.00 28.15 O
ATOM 28 O5' A B1314 33.557 120.662 71.423 1.00 28.44 O
TER
ATOM 2 P U A 891 38.581 113.281 73.648 1.00 25.67 P
ATOM 3 OP1 U A 891 38.952 113.226 75.080 1.00 25.41 O
ATOM 4 OP2 U A 891 38.286 112.024 72.930 1.00 26.12 O
ATOM 5 O5' U A 891 37.292 114.193 73.507 1.00 24.68 O
ATOM 6 C5' U A 891 37.109 115.365 74.305 1.00 24.10 C
ATOM 7 C4' U A 891 36.134 116.286 73.623 1.00 26.39 C
ATOM 8 O4' U A 891 36.820 117.025 72.577 1.00 27.16 O
ATOM 9 C3' U A 891 34.960 115.575 72.949 1.00 26.15 C
ATOM 10 O3' U A 891 33.790 116.356 73.027 1.00 26.07 O
ATOM 11 C2' U A 891 35.411 115.484 71.501 1.00 25.88 C
ATOM 12 O2' U A 891 34.320 115.394 70.610 1.00 23.95 O
ATOM 13 C1' U A 891 36.174 116.798 71.343 1.00 27.80 C
ATOM 14 N1 U A 891 37.190 116.738 70.285 1.00 29.06 N
ATOM 15 C2 U A 891 36.887 117.340 69.080 1.00 29.20 C
ATOM 16 O2 U A 891 35.861 117.959 68.892 1.00 29.87 O
ATOM 17 N3 U A 891 37.838 117.198 68.105 1.00 29.96 N
ATOM 18 C4 U A 891 39.045 116.547 68.215 1.00 30.34 C
ATOM 19 O4 U A 891 39.779 116.473 67.232 1.00 31.99 O
ATOM 20 C5 U A 891 39.303 115.978 69.504 1.00 31.26 C
ATOM 21 C6 U A 891 38.388 116.089 70.472 1.00 29.68 C
ATOM 22 P C A 892 32.699 116.014 74.140 1.00 29.68 P
ATOM 23 OP1 C A 892 31.603 117.003 74.014 1.00 28.60 O
ATOM 24 OP2 C A 892 33.413 115.873 75.425 1.00 27.62 O
ATOM 25 O5' C A 892 32.172 114.566 73.739 1.00 30.32 O
TER
ATOM 1 O3' C B1312 35.014 118.231 63.863 1.00 29.31 O
ATOM 2 P G B1313 35.517 117.519 65.206 1.00 27.20 P
ATOM 3 OP1 G B1313 36.798 118.166 65.574 1.00 27.68 O
ATOM 4 OP2 G B1313 35.460 116.041 65.052 1.00 24.24 O
ATOM 5 O5' G B1313 34.427 117.982 66.269 1.00 23.41 O
ATOM 6 C5' G B1313 33.966 119.348 66.310 1.00 21.91 C
ATOM 7 C4' G B1313 32.802 119.472 67.265 1.00 25.85 C
ATOM 8 O4' G B1313 31.771 118.541 66.835 1.00 29.75 O
ATOM 9 C3' G B1313 33.096 119.104 68.717 1.00 26.25 C
ATOM 10 O3' G B1313 32.146 119.755 69.547 1.00 24.99 O
ATOM 11 C2' G B1313 32.784 117.616 68.737 1.00 27.43 C
ATOM 12 O2' G B1313 32.477 117.137 70.025 1.00 28.51 O
ATOM 13 C1' G B1313 31.545 117.584 67.847 1.00 28.56 C
ATOM 14 N9 G B1313 31.273 116.300 67.219 1.00 29.58 N
ATOM 15 C8 G B1313 32.125 115.537 66.454 1.00 30.40 C
ATOM 16 N7 G B1313 31.580 114.422 66.045 1.00 31.30 N
ATOM 17 C5 G B1313 30.294 114.453 66.573 1.00 30.77 C
ATOM 18 C6 G B1313 29.239 113.517 66.474 1.00 29.55 C
ATOM 19 O6 G B1313 29.225 112.444 65.881 1.00 32.59 O
ATOM 20 N1 G B1313 28.108 113.943 67.157 1.00 29.07 N
ATOM 21 C2 G B1313 28.000 115.128 67.840 1.00 31.06 C
ATOM 22 N2 G B1313 26.816 115.371 68.427 1.00 30.60 N
ATOM 23 N3 G B1313 28.978 116.014 67.941 1.00 30.25 N
ATOM 24 C4 G B1313 30.089 115.611 67.291 1.00 30.19 C
ATOM 25 P A B1314 32.530 121.118 70.292 1.00 29.50 P
ATOM 26 OP1 A B1314 31.313 121.641 70.964 1.00 25.99 O
ATOM 27 OP2 A B1314 33.236 121.960 69.284 1.00 28.15 O
ATOM 28 O5' A B1314 33.557 120.662 71.423 1.00 28.44 O
TER
Atoms:
C4: (39.045,116.547,68.215)
N3: (37.838,117.198,68.105)
OP1: (38.952,113.226,75.080)
OP2: (38.286,112.024,72.930)
C2: (36.887,117.340,69.080)
C1': (36.174,116.798,71.343)
C3': (34.960,115.575,72.949)
O5': (37.292,114.193,73.507)
O4': (36.820,117.025,72.577)
C5': (37.109,115.365,74.305)
P: (38.581,113.281,73.648)
C4': (36.134,116.286,73.623)
C2': (35.411,115.484,71.501)
O2': (34.320,115.394,70.610)
N1: (37.190,116.738,70.285)
O4: (39.779,116.473,67.232)
O2: (35.861,117.959,68.892)
C6: (38.388,116.089,70.472)
C5: (39.303,115.978,69.504)
O3': (33.790,116.356,73.027)
N3: (37.838,117.198,68.105)
OP1: (38.952,113.226,75.080)
OP2: (38.286,112.024,72.930)
C2: (36.887,117.340,69.080)
C1': (36.174,116.798,71.343)
C3': (34.960,115.575,72.949)
O5': (37.292,114.193,73.507)
O4': (36.820,117.025,72.577)
C5': (37.109,115.365,74.305)
P: (38.581,113.281,73.648)
C4': (36.134,116.286,73.623)
C2': (35.411,115.484,71.501)
O2': (34.320,115.394,70.610)
N1: (37.190,116.738,70.285)
O4: (39.779,116.473,67.232)
O2: (35.861,117.959,68.892)
C6: (38.388,116.089,70.472)
C5: (39.303,115.978,69.504)
O3': (33.790,116.356,73.027)
OP1: (36.798,118.166,65.574)
OP2: (35.460,116.041,65.052)
C3': (33.096,119.104,68.717)
C1': (31.545,117.584,67.847)
C5': (33.966,119.348,66.310)
O6: (29.225,112.444,65.881)
O4': (31.771,118.541,66.835)
C8: (32.125,115.537,66.454)
C2: (28.000,115.128,67.840)
C6: (29.239,113.517,66.474)
C5: (30.294,114.453,66.573)
C4: (30.089,115.611,67.291)
P: (35.517,117.519,65.206)
C4': (32.802,119.472,67.265)
C2': (32.784,117.616,68.737)
O2': (32.477,117.137,70.025)
N1: (28.108,113.943,67.157)
N2: (26.816,115.371,68.427)
N3: (28.978,116.014,67.941)
N7: (31.580,114.422,66.045)
N9: (31.273,116.300,67.219)
O5': (34.427,117.982,66.269)
O3': (32.146,119.755,69.547)
OP2: (35.460,116.041,65.052)
C3': (33.096,119.104,68.717)
C1': (31.545,117.584,67.847)
C5': (33.966,119.348,66.310)
O6: (29.225,112.444,65.881)
O4': (31.771,118.541,66.835)
C8: (32.125,115.537,66.454)
C2: (28.000,115.128,67.840)
C6: (29.239,113.517,66.474)
C5: (30.294,114.453,66.573)
C4: (30.089,115.611,67.291)
P: (35.517,117.519,65.206)
C4': (32.802,119.472,67.265)
C2': (32.784,117.616,68.737)
O2': (32.477,117.137,70.025)
N1: (28.108,113.943,67.157)
N2: (26.816,115.371,68.427)
N3: (28.978,116.014,67.941)
N7: (31.580,114.422,66.045)
N9: (31.273,116.300,67.219)
O5': (34.427,117.982,66.269)
O3': (32.146,119.755,69.547)
Image (generated by PyMOL):