Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:0613:01003
Extra
PDB:
ATOM 1 O3' U A 612 50.660 107.503 85.648 1.00 24.50 O
ATOM 2 P U A 613 50.350 105.938 85.763 1.00 25.39 P
ATOM 3 OP1 U A 613 51.581 105.210 85.337 1.00 22.92 O
ATOM 4 OP2 U A 613 49.067 105.663 85.079 1.00 22.16 O
ATOM 5 O5' U A 613 50.119 105.708 87.325 1.00 24.10 O
ATOM 6 C5' U A 613 51.182 105.904 88.258 1.00 23.04 C
ATOM 7 C4' U A 613 50.672 105.823 89.680 1.00 24.42 C
ATOM 8 O4' U A 613 49.657 106.833 89.901 1.00 25.51 O
ATOM 9 C3' U A 613 49.951 104.565 90.145 1.00 24.66 C
ATOM 10 O3' U A 613 50.846 103.485 90.405 1.00 25.73 O
ATOM 11 C2' U A 613 49.345 105.068 91.447 1.00 23.12 C
ATOM 12 O2' U A 613 50.334 105.190 92.448 1.00 23.43 O
ATOM 13 C1' U A 613 48.903 106.478 91.048 1.00 23.78 C
ATOM 14 N1 U A 613 47.470 106.553 90.731 1.00 26.29 N
ATOM 15 C2 U A 613 46.587 106.739 91.793 1.00 27.45 C
ATOM 16 O2 U A 613 46.956 106.869 92.945 1.00 28.91 O
ATOM 17 N3 U A 613 45.257 106.756 91.452 1.00 25.90 N
ATOM 18 C4 U A 613 44.726 106.600 90.189 1.00 27.56 C
ATOM 19 O4 U A 613 43.506 106.506 90.059 1.00 25.67 O
ATOM 20 C5 U A 613 45.698 106.437 89.144 1.00 27.41 C
ATOM 21 C6 U A 613 47.003 106.423 89.442 1.00 25.45 C
ATOM 22 P U A 614 50.395 101.974 90.081 1.00 24.40 P
ATOM 23 OP1 U A 614 51.574 101.086 90.236 1.00 22.75 O
ATOM 24 OP2 U A 614 49.637 101.944 88.816 1.00 25.07 O
ATOM 25 O5' U A 614 49.362 101.641 91.239 1.00 25.78 O
TER
ATOM 1 O3' C B1002 54.186 93.930 84.801 1.00 28.10 O
ATOM 2 P C B1003 55.267 95.117 84.854 1.00 26.76 P
ATOM 3 OP1 C B1003 55.818 95.313 83.493 1.00 29.84 O
ATOM 4 OP2 C B1003 56.181 94.772 85.971 1.00 31.02 O
ATOM 5 O5' C B1003 54.459 96.436 85.245 1.00 27.13 O
ATOM 6 C5' C B1003 53.635 96.493 86.413 1.00 26.88 C
ATOM 7 C4' C B1003 54.426 96.973 87.617 1.00 28.46 C
ATOM 8 O4' C B1003 54.830 98.372 87.449 1.00 27.54 O
ATOM 9 C3' C B1003 53.613 96.932 88.923 1.00 28.06 C
ATOM 10 O3' C B1003 54.449 96.590 90.021 1.00 25.84 O
ATOM 11 C2' C B1003 53.207 98.389 89.099 1.00 28.34 C
ATOM 12 O2' C B1003 52.910 98.743 90.430 1.00 30.10 O
ATOM 13 C1' C B1003 54.481 99.077 88.624 1.00 27.46 C
ATOM 14 N1 C B1003 54.362 100.524 88.362 1.00 28.38 N
ATOM 15 C2 C B1003 54.914 101.406 89.307 1.00 30.63 C
ATOM 16 O2 C B1003 55.490 100.937 90.303 1.00 36.21 O
ATOM 17 N3 C B1003 54.808 102.740 89.117 1.00 29.38 N
ATOM 18 C4 C B1003 54.189 103.209 88.036 1.00 28.82 C
ATOM 19 N4 C B1003 54.121 104.534 87.897 1.00 27.54 N
ATOM 20 C5 C B1003 53.617 102.338 87.051 1.00 26.81 C
ATOM 21 C6 C B1003 53.728 101.014 87.252 1.00 26.24 C
ATOM 22 P G B1004 54.886 95.067 90.253 1.00 27.30 P
ATOM 23 OP1 G B1004 56.090 95.049 91.103 1.00 34.53 O
ATOM 24 OP2 G B1004 54.926 94.404 88.936 1.00 31.91 O
ATOM 25 O5' G B1004 53.749 94.428 91.178 1.00 33.31 O
TER
ATOM 2 P U A 613 50.350 105.938 85.763 1.00 25.39 P
ATOM 3 OP1 U A 613 51.581 105.210 85.337 1.00 22.92 O
ATOM 4 OP2 U A 613 49.067 105.663 85.079 1.00 22.16 O
ATOM 5 O5' U A 613 50.119 105.708 87.325 1.00 24.10 O
ATOM 6 C5' U A 613 51.182 105.904 88.258 1.00 23.04 C
ATOM 7 C4' U A 613 50.672 105.823 89.680 1.00 24.42 C
ATOM 8 O4' U A 613 49.657 106.833 89.901 1.00 25.51 O
ATOM 9 C3' U A 613 49.951 104.565 90.145 1.00 24.66 C
ATOM 10 O3' U A 613 50.846 103.485 90.405 1.00 25.73 O
ATOM 11 C2' U A 613 49.345 105.068 91.447 1.00 23.12 C
ATOM 12 O2' U A 613 50.334 105.190 92.448 1.00 23.43 O
ATOM 13 C1' U A 613 48.903 106.478 91.048 1.00 23.78 C
ATOM 14 N1 U A 613 47.470 106.553 90.731 1.00 26.29 N
ATOM 15 C2 U A 613 46.587 106.739 91.793 1.00 27.45 C
ATOM 16 O2 U A 613 46.956 106.869 92.945 1.00 28.91 O
ATOM 17 N3 U A 613 45.257 106.756 91.452 1.00 25.90 N
ATOM 18 C4 U A 613 44.726 106.600 90.189 1.00 27.56 C
ATOM 19 O4 U A 613 43.506 106.506 90.059 1.00 25.67 O
ATOM 20 C5 U A 613 45.698 106.437 89.144 1.00 27.41 C
ATOM 21 C6 U A 613 47.003 106.423 89.442 1.00 25.45 C
ATOM 22 P U A 614 50.395 101.974 90.081 1.00 24.40 P
ATOM 23 OP1 U A 614 51.574 101.086 90.236 1.00 22.75 O
ATOM 24 OP2 U A 614 49.637 101.944 88.816 1.00 25.07 O
ATOM 25 O5' U A 614 49.362 101.641 91.239 1.00 25.78 O
TER
ATOM 1 O3' C B1002 54.186 93.930 84.801 1.00 28.10 O
ATOM 2 P C B1003 55.267 95.117 84.854 1.00 26.76 P
ATOM 3 OP1 C B1003 55.818 95.313 83.493 1.00 29.84 O
ATOM 4 OP2 C B1003 56.181 94.772 85.971 1.00 31.02 O
ATOM 5 O5' C B1003 54.459 96.436 85.245 1.00 27.13 O
ATOM 6 C5' C B1003 53.635 96.493 86.413 1.00 26.88 C
ATOM 7 C4' C B1003 54.426 96.973 87.617 1.00 28.46 C
ATOM 8 O4' C B1003 54.830 98.372 87.449 1.00 27.54 O
ATOM 9 C3' C B1003 53.613 96.932 88.923 1.00 28.06 C
ATOM 10 O3' C B1003 54.449 96.590 90.021 1.00 25.84 O
ATOM 11 C2' C B1003 53.207 98.389 89.099 1.00 28.34 C
ATOM 12 O2' C B1003 52.910 98.743 90.430 1.00 30.10 O
ATOM 13 C1' C B1003 54.481 99.077 88.624 1.00 27.46 C
ATOM 14 N1 C B1003 54.362 100.524 88.362 1.00 28.38 N
ATOM 15 C2 C B1003 54.914 101.406 89.307 1.00 30.63 C
ATOM 16 O2 C B1003 55.490 100.937 90.303 1.00 36.21 O
ATOM 17 N3 C B1003 54.808 102.740 89.117 1.00 29.38 N
ATOM 18 C4 C B1003 54.189 103.209 88.036 1.00 28.82 C
ATOM 19 N4 C B1003 54.121 104.534 87.897 1.00 27.54 N
ATOM 20 C5 C B1003 53.617 102.338 87.051 1.00 26.81 C
ATOM 21 C6 C B1003 53.728 101.014 87.252 1.00 26.24 C
ATOM 22 P G B1004 54.886 95.067 90.253 1.00 27.30 P
ATOM 23 OP1 G B1004 56.090 95.049 91.103 1.00 34.53 O
ATOM 24 OP2 G B1004 54.926 94.404 88.936 1.00 31.91 O
ATOM 25 O5' G B1004 53.749 94.428 91.178 1.00 33.31 O
TER
Atoms:
C4: (44.726,106.600,90.189)
N3: (45.257,106.756,91.452)
OP1: (51.581,105.210,85.337)
OP2: (49.067,105.663,85.079)
C2: (46.587,106.739,91.793)
C1': (48.903,106.478,91.048)
C3': (49.951,104.565,90.145)
O5': (50.119,105.708,87.325)
O4': (49.657,106.833,89.901)
C5': (51.182,105.904,88.258)
P: (50.350,105.938,85.763)
C4': (50.672,105.823,89.680)
C2': (49.345,105.068,91.447)
O2': (50.334,105.190,92.448)
N1: (47.470,106.553,90.731)
O4: (43.506,106.506,90.059)
O2: (46.956,106.869,92.945)
C6: (47.003,106.423,89.442)
C5: (45.698,106.437,89.144)
O3': (50.846,103.485,90.405)
N3: (45.257,106.756,91.452)
OP1: (51.581,105.210,85.337)
OP2: (49.067,105.663,85.079)
C2: (46.587,106.739,91.793)
C1': (48.903,106.478,91.048)
C3': (49.951,104.565,90.145)
O5': (50.119,105.708,87.325)
O4': (49.657,106.833,89.901)
C5': (51.182,105.904,88.258)
P: (50.350,105.938,85.763)
C4': (50.672,105.823,89.680)
C2': (49.345,105.068,91.447)
O2': (50.334,105.190,92.448)
N1: (47.470,106.553,90.731)
O4: (43.506,106.506,90.059)
O2: (46.956,106.869,92.945)
C6: (47.003,106.423,89.442)
C5: (45.698,106.437,89.144)
O3': (50.846,103.485,90.405)
C2: (54.914,101.406,89.307)
OP1: (55.818,95.313,83.493)
OP2: (56.181,94.772,85.971)
C4: (54.189,103.209,88.036)
O5': (54.459,96.436,85.245)
C3': (53.613,96.932,88.923)
C1': (54.481,99.077,88.624)
O4': (54.830,98.372,87.449)
C5': (53.635,96.493,86.413)
P: (55.267,95.117,84.854)
O2: (55.490,100.937,90.303)
C4': (54.426,96.973,87.617)
C2': (53.207,98.389,89.099)
O2': (52.910,98.743,90.430)
N1: (54.362,100.524,88.362)
N3: (54.808,102.740,89.117)
N4: (54.121,104.534,87.897)
C6: (53.728,101.014,87.252)
C5: (53.617,102.338,87.051)
O3': (54.449,96.590,90.021)
OP1: (55.818,95.313,83.493)
OP2: (56.181,94.772,85.971)
C4: (54.189,103.209,88.036)
O5': (54.459,96.436,85.245)
C3': (53.613,96.932,88.923)
C1': (54.481,99.077,88.624)
O4': (54.830,98.372,87.449)
C5': (53.635,96.493,86.413)
P: (55.267,95.117,84.854)
O2: (55.490,100.937,90.303)
C4': (54.426,96.973,87.617)
C2': (53.207,98.389,89.099)
O2': (52.910,98.743,90.430)
N1: (54.362,100.524,88.362)
N3: (54.808,102.740,89.117)
N4: (54.121,104.534,87.897)
C6: (53.728,101.014,87.252)
C5: (53.617,102.338,87.051)
O3': (54.449,96.590,90.021)
Image (generated by PyMOL):