ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ9:943:938

Extra

PDB:
ATOM 1 O3' G A 42 84.333 16.392 95.741 1.00 63.19 O
ATOM 2 P A A 43 84.297 15.954 97.288 1.00 63.76 P
ATOM 3 OP1 A A 43 85.660 15.588 97.757 1.00 65.20 O
ATOM 4 OP2 A A 43 83.184 14.982 97.432 1.00 64.02 O
ATOM 5 O5' A A 43 83.879 17.306 98.015 1.00 63.18 O
ATOM 6 C5' A A 43 83.447 17.332 99.380 1.00 63.63 C
ATOM 7 C4' A A 43 83.094 18.749 99.764 1.00 65.22 C
ATOM 8 O4' A A 43 84.287 19.572 99.634 1.00 65.77 O
ATOM 9 C3' A A 43 82.081 19.424 98.847 1.00 65.59 C
ATOM 10 O3' A A 43 80.739 19.102 99.206 1.00 66.24 O
ATOM 11 C2' A A 43 82.418 20.899 99.033 1.00 65.38 C
ATOM 12 O2' A A 43 81.928 21.429 100.251 1.00 66.81 O
ATOM 13 C1' A A 43 83.947 20.845 99.099 1.00 64.11 C
ATOM 14 N9 A A 43 84.583 20.976 97.783 1.00 61.82 N
ATOM 15 C8 A A 43 85.197 19.995 97.040 1.00 61.32 C
ATOM 16 N7 A A 43 85.636 20.406 95.876 1.00 59.94 N
ATOM 17 C5 A A 43 85.300 21.751 95.852 1.00 59.54 C
ATOM 18 C6 A A 43 85.488 22.750 94.886 1.00 59.25 C
ATOM 19 N6 A A 43 86.077 22.538 93.709 1.00 57.08 N
ATOM 20 N1 A A 43 85.042 23.993 95.173 1.00 60.58 N
ATOM 21 C2 A A 43 84.444 24.204 96.356 1.00 60.45 C
ATOM 22 N3 A A 43 84.206 23.344 97.343 1.00 60.88 N
ATOM 23 C4 A A 43 84.663 22.119 97.024 1.00 60.47 C
ATOM 24 P A A 44 79.678 18.686 98.065 1.00 67.18 P
ATOM 25 OP1 A A 44 78.423 18.317 98.768 1.00 67.05 O
ATOM 26 OP2 A A 44 80.310 17.715 97.118 1.00 65.90 O
ATOM 27 O5' A A 44 79.410 20.037 97.266 1.00 66.80 O
TER

ATOM 1 O3' A B 37 85.505 24.140 86.890 1.00 62.81 O
ATOM 2 P U B 38 87.002 24.557 86.461 1.00 66.82 P
ATOM 3 OP1 U B 38 86.902 25.197 85.120 1.00 67.82 O
ATOM 4 OP2 U B 38 87.923 23.400 86.648 1.00 66.46 O
ATOM 5 O5' U B 38 87.421 25.679 87.512 1.00 65.95 O
ATOM 6 C5' U B 38 86.512 26.104 88.536 1.00 67.68 C
ATOM 7 C4' U B 38 86.874 25.466 89.859 1.00 67.79 C
ATOM 8 O4' U B 38 87.005 24.048 89.667 1.00 67.01 O
ATOM 9 C3' U B 38 88.219 25.830 90.477 1.00 68.91 C
ATOM 10 O3' U B 38 88.014 27.115 91.105 1.00 70.67 O
ATOM 11 C2' U B 38 88.466 24.660 91.446 1.00 67.91 C
ATOM 12 O2' U B 38 87.837 24.862 92.694 1.00 70.59 O
ATOM 13 C1' U B 38 87.679 23.520 90.781 1.00 66.52 C
ATOM 14 N1 U B 38 88.284 22.224 90.424 1.00 65.00 N
ATOM 15 C2 U B 38 88.539 21.315 91.445 1.00 64.77 C
ATOM 16 O2 U B 38 88.407 21.585 92.632 1.00 66.13 O
ATOM 17 N3 U B 38 88.958 20.074 91.025 1.00 62.49 N
ATOM 18 C4 U B 38 89.170 19.665 89.725 1.00 62.08 C
ATOM 19 O4 U B 38 89.516 18.504 89.502 1.00 60.86 O
ATOM 20 C5 U B 38 88.953 20.677 88.740 1.00 63.44 C
ATOM 21 C6 U B 38 88.534 21.890 89.113 1.00 64.88 C
ATOM 22 P C B 39 89.102 27.748 92.116 1.00 72.19 P
ATOM 23 OP1 C B 39 89.367 26.772 93.196 1.00 73.44 O
ATOM 24 OP2 C B 39 88.573 29.089 92.463 1.00 72.33 O
ATOM 25 O5' C B 39 90.452 27.945 91.281 1.00 72.56 O
TER

Atoms:
OP1: (85.660,15.588,97.757)
OP2: (83.184,14.982,97.432)
C3': (82.081,19.424,98.847)
C1': (83.947,20.845,99.099)
C5': (83.447,17.332,99.380)
O4': (84.287,19.572,99.634)
C8: (85.197,19.995,97.040)
O2': (81.928,21.429,100.251)
C6: (85.488,22.750,94.886)
C5: (85.300,21.751,95.852)
C4: (84.663,22.119,97.024)
P: (84.297,15.954,97.288)
C4': (83.094,18.749,99.764)
C2': (82.418,20.899,99.033)
C2: (84.444,24.204,96.356)
N1: (85.042,23.993,95.173)
N3: (84.206,23.344,97.343)
N6: (86.077,22.538,93.709)
N7: (85.636,20.406,95.876)
N9: (84.583,20.976,97.783)
O5': (83.879,17.306,98.015)
O3': (80.739,19.102,99.206)
C4: (89.170,19.665,89.725)
N3: (88.958,20.074,91.025)
OP1: (86.902,25.197,85.120)
OP2: (87.923,23.400,86.648)
C2: (88.539,21.315,91.445)
C1': (87.679,23.520,90.781)
C3': (88.219,25.830,90.477)
O5': (87.421,25.679,87.512)
O4': (87.005,24.048,89.667)
C5': (86.512,26.104,88.536)
P: (87.002,24.557,86.461)
C4': (86.874,25.466,89.859)
C2': (88.466,24.660,91.446)
O2': (87.837,24.862,92.694)
N1: (88.284,22.224,90.424)
O4: (89.516,18.504,89.502)
O2: (88.407,21.585,92.632)
C6: (88.534,21.890,89.113)
C5: (88.953,20.677,88.740)
O3': (88.014,27.115,91.105)
Image (generated by PyMOL):
PyMOL image
show in jmol