Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2500:A2566
Extra
PDB:
ATOM 1 O3' U A2499 -76.389 -55.545 -6.931 1.00 7.17 O
ATOM 2 P C A2500 -75.882 -55.165 -8.416 1.00 0.01 P
ATOM 3 OP1 C A2500 -75.931 -56.387 -9.208 1.00 0.01 O
ATOM 4 OP2 C A2500 -74.591 -54.502 -8.261 1.00 0.01 O
ATOM 5 O5' C A2500 -76.959 -54.115 -8.957 1.00 0.01 O
ATOM 6 C5' C A2500 -77.162 -52.900 -8.287 1.00 0.01 C
ATOM 7 C4' C A2500 -77.316 -51.698 -9.205 1.00 0.01 C
ATOM 8 O4' C A2500 -76.675 -50.575 -8.561 1.00 0.01 O
ATOM 9 C3' C A2500 -76.682 -51.750 -10.610 1.00 0.01 C
ATOM 10 O3' C A2500 -77.571 -52.214 -11.609 1.00 0.01 O
ATOM 11 C2' C A2500 -76.283 -50.308 -10.853 1.00 0.01 C
ATOM 12 O2' C A2500 -77.393 -49.549 -11.262 1.00 0.01 O
ATOM 13 C1' C A2500 -75.887 -49.864 -9.471 1.00 0.01 C
ATOM 14 N1 C A2500 -74.485 -50.171 -9.198 1.00 0.01 N
ATOM 15 C2 C A2500 -73.573 -49.205 -9.567 1.00 0.01 C
ATOM 16 O2 C A2500 -73.978 -48.164 -10.078 1.00 0.01 O
ATOM 17 N3 C A2500 -72.276 -49.418 -9.378 1.00 0.01 N
ATOM 18 C4 C A2500 -71.876 -50.549 -8.850 1.00 0.01 C
ATOM 19 N4 C A2500 -70.560 -50.653 -8.694 1.00 0.01 N
ATOM 20 C5 C A2500 -72.791 -51.566 -8.466 1.00 0.01 C
ATOM 21 C6 C A2500 -74.087 -51.344 -8.659 1.00 0.01 C
ATOM 22 P G A2501 -77.058 -52.587 -13.106 1.00 0.01 P
ATOM 23 OP1 G A2501 -78.197 -52.364 -13.991 1.00 0.01 O
ATOM 24 OP2 G A2501 -76.459 -53.948 -13.038 1.00 0.01 O
ATOM 25 O5' G A2501 -75.950 -51.514 -13.456 1.00 0.01 O
TER
ATOM 1 O3' A B2565 -79.300 -61.755 -9.838 1.00 0.01 O
ATOM 2 P C B2566 -78.753 -60.279 -10.043 1.00 0.01 P
ATOM 3 OP1 C B2566 -77.647 -60.363 -10.988 1.00 0.01 O
ATOM 4 OP2 C B2566 -78.511 -59.702 -8.741 1.00 0.01 O
ATOM 5 O5' C B2566 -79.968 -59.570 -10.700 1.00 0.01 O
ATOM 6 C5' C B2566 -80.768 -60.265 -11.618 1.00 0.01 C
ATOM 7 C4' C B2566 -81.268 -59.353 -12.695 1.00 0.01 C
ATOM 8 O4' C B2566 -82.116 -58.347 -12.120 1.00 0.01 O
ATOM 9 C3' C B2566 -80.220 -58.564 -13.455 1.00 0.01 C
ATOM 10 O3' C B2566 -79.632 -59.344 -14.473 1.00 0.01 O
ATOM 11 C2' C B2566 -81.043 -57.420 -14.006 1.00 0.01 C
ATOM 12 O2' C B2566 -81.756 -57.856 -15.160 1.00 0.01 O
ATOM 13 C1' C B2566 -82.061 -57.189 -12.891 1.00 0.01 C
ATOM 14 N1 C B2566 -81.738 -56.062 -12.011 1.00 0.39 N
ATOM 15 C2 C B2566 -81.755 -54.772 -12.502 1.00 0.39 C
ATOM 16 O2 C B2566 -81.951 -54.592 -13.698 1.00 0.39 O
ATOM 17 N3 C B2566 -81.500 -53.755 -11.657 1.00 0.39 N
ATOM 18 C4 C B2566 -81.277 -53.988 -10.345 1.00 0.39 C
ATOM 19 N4 C B2566 -81.034 -52.942 -9.540 1.00 0.39 N
ATOM 20 C5 C B2566 -81.301 -55.303 -9.805 1.00 0.39 C
ATOM 21 C6 C B2566 -81.553 -56.286 -10.678 1.00 0.39 C
ATOM 22 P G B2567 -78.101 -59.180 -14.881 1.00 0.01 P
ATOM 23 OP1 G B2567 -77.374 -58.873 -13.674 1.00 0.01 O
ATOM 24 OP2 G B2567 -78.052 -58.223 -16.007 1.00 0.01 O
ATOM 25 O5' G B2567 -77.701 -60.642 -15.392 1.00 0.01 O
TER
ATOM 2 P C A2500 -75.882 -55.165 -8.416 1.00 0.01 P
ATOM 3 OP1 C A2500 -75.931 -56.387 -9.208 1.00 0.01 O
ATOM 4 OP2 C A2500 -74.591 -54.502 -8.261 1.00 0.01 O
ATOM 5 O5' C A2500 -76.959 -54.115 -8.957 1.00 0.01 O
ATOM 6 C5' C A2500 -77.162 -52.900 -8.287 1.00 0.01 C
ATOM 7 C4' C A2500 -77.316 -51.698 -9.205 1.00 0.01 C
ATOM 8 O4' C A2500 -76.675 -50.575 -8.561 1.00 0.01 O
ATOM 9 C3' C A2500 -76.682 -51.750 -10.610 1.00 0.01 C
ATOM 10 O3' C A2500 -77.571 -52.214 -11.609 1.00 0.01 O
ATOM 11 C2' C A2500 -76.283 -50.308 -10.853 1.00 0.01 C
ATOM 12 O2' C A2500 -77.393 -49.549 -11.262 1.00 0.01 O
ATOM 13 C1' C A2500 -75.887 -49.864 -9.471 1.00 0.01 C
ATOM 14 N1 C A2500 -74.485 -50.171 -9.198 1.00 0.01 N
ATOM 15 C2 C A2500 -73.573 -49.205 -9.567 1.00 0.01 C
ATOM 16 O2 C A2500 -73.978 -48.164 -10.078 1.00 0.01 O
ATOM 17 N3 C A2500 -72.276 -49.418 -9.378 1.00 0.01 N
ATOM 18 C4 C A2500 -71.876 -50.549 -8.850 1.00 0.01 C
ATOM 19 N4 C A2500 -70.560 -50.653 -8.694 1.00 0.01 N
ATOM 20 C5 C A2500 -72.791 -51.566 -8.466 1.00 0.01 C
ATOM 21 C6 C A2500 -74.087 -51.344 -8.659 1.00 0.01 C
ATOM 22 P G A2501 -77.058 -52.587 -13.106 1.00 0.01 P
ATOM 23 OP1 G A2501 -78.197 -52.364 -13.991 1.00 0.01 O
ATOM 24 OP2 G A2501 -76.459 -53.948 -13.038 1.00 0.01 O
ATOM 25 O5' G A2501 -75.950 -51.514 -13.456 1.00 0.01 O
TER
ATOM 1 O3' A B2565 -79.300 -61.755 -9.838 1.00 0.01 O
ATOM 2 P C B2566 -78.753 -60.279 -10.043 1.00 0.01 P
ATOM 3 OP1 C B2566 -77.647 -60.363 -10.988 1.00 0.01 O
ATOM 4 OP2 C B2566 -78.511 -59.702 -8.741 1.00 0.01 O
ATOM 5 O5' C B2566 -79.968 -59.570 -10.700 1.00 0.01 O
ATOM 6 C5' C B2566 -80.768 -60.265 -11.618 1.00 0.01 C
ATOM 7 C4' C B2566 -81.268 -59.353 -12.695 1.00 0.01 C
ATOM 8 O4' C B2566 -82.116 -58.347 -12.120 1.00 0.01 O
ATOM 9 C3' C B2566 -80.220 -58.564 -13.455 1.00 0.01 C
ATOM 10 O3' C B2566 -79.632 -59.344 -14.473 1.00 0.01 O
ATOM 11 C2' C B2566 -81.043 -57.420 -14.006 1.00 0.01 C
ATOM 12 O2' C B2566 -81.756 -57.856 -15.160 1.00 0.01 O
ATOM 13 C1' C B2566 -82.061 -57.189 -12.891 1.00 0.01 C
ATOM 14 N1 C B2566 -81.738 -56.062 -12.011 1.00 0.39 N
ATOM 15 C2 C B2566 -81.755 -54.772 -12.502 1.00 0.39 C
ATOM 16 O2 C B2566 -81.951 -54.592 -13.698 1.00 0.39 O
ATOM 17 N3 C B2566 -81.500 -53.755 -11.657 1.00 0.39 N
ATOM 18 C4 C B2566 -81.277 -53.988 -10.345 1.00 0.39 C
ATOM 19 N4 C B2566 -81.034 -52.942 -9.540 1.00 0.39 N
ATOM 20 C5 C B2566 -81.301 -55.303 -9.805 1.00 0.39 C
ATOM 21 C6 C B2566 -81.553 -56.286 -10.678 1.00 0.39 C
ATOM 22 P G B2567 -78.101 -59.180 -14.881 1.00 0.01 P
ATOM 23 OP1 G B2567 -77.374 -58.873 -13.674 1.00 0.01 O
ATOM 24 OP2 G B2567 -78.052 -58.223 -16.007 1.00 0.01 O
ATOM 25 O5' G B2567 -77.701 -60.642 -15.392 1.00 0.01 O
TER
Atoms:
C2: (-73.573,-49.205,-9.567)
OP1: (-75.931,-56.387,-9.208)
OP2: (-74.591,-54.502,-8.261)
C4: (-71.876,-50.549,-8.850)
O5': (-76.959,-54.115,-8.957)
C3': (-76.682,-51.750,-10.610)
C1': (-75.887,-49.864,-9.471)
O4': (-76.675,-50.575,-8.561)
C5': (-77.162,-52.900,-8.287)
P: (-75.882,-55.165,-8.416)
O2: (-73.978,-48.164,-10.078)
C4': (-77.316,-51.698,-9.205)
C2': (-76.283,-50.308,-10.853)
O2': (-77.393,-49.549,-11.262)
N1: (-74.485,-50.171,-9.198)
N3: (-72.276,-49.418,-9.378)
N4: (-70.560,-50.653,-8.694)
C6: (-74.087,-51.344,-8.659)
C5: (-72.791,-51.566,-8.466)
O3': (-77.571,-52.214,-11.609)
OP1: (-75.931,-56.387,-9.208)
OP2: (-74.591,-54.502,-8.261)
C4: (-71.876,-50.549,-8.850)
O5': (-76.959,-54.115,-8.957)
C3': (-76.682,-51.750,-10.610)
C1': (-75.887,-49.864,-9.471)
O4': (-76.675,-50.575,-8.561)
C5': (-77.162,-52.900,-8.287)
P: (-75.882,-55.165,-8.416)
O2: (-73.978,-48.164,-10.078)
C4': (-77.316,-51.698,-9.205)
C2': (-76.283,-50.308,-10.853)
O2': (-77.393,-49.549,-11.262)
N1: (-74.485,-50.171,-9.198)
N3: (-72.276,-49.418,-9.378)
N4: (-70.560,-50.653,-8.694)
C6: (-74.087,-51.344,-8.659)
C5: (-72.791,-51.566,-8.466)
O3': (-77.571,-52.214,-11.609)
C2: (-81.755,-54.772,-12.502)
OP1: (-77.647,-60.363,-10.988)
OP2: (-78.511,-59.702,-8.741)
C4: (-81.277,-53.988,-10.345)
O5': (-79.968,-59.570,-10.700)
C3': (-80.220,-58.564,-13.455)
C1': (-82.061,-57.189,-12.891)
O4': (-82.116,-58.347,-12.120)
C5': (-80.768,-60.265,-11.618)
P: (-78.753,-60.279,-10.043)
O2: (-81.951,-54.592,-13.698)
C4': (-81.268,-59.353,-12.695)
C2': (-81.043,-57.420,-14.006)
O2': (-81.756,-57.856,-15.160)
N1: (-81.738,-56.062,-12.011)
N3: (-81.500,-53.755,-11.657)
N4: (-81.034,-52.942,-9.540)
C6: (-81.553,-56.286,-10.678)
C5: (-81.301,-55.303,-9.805)
O3': (-79.632,-59.344,-14.473)
OP1: (-77.647,-60.363,-10.988)
OP2: (-78.511,-59.702,-8.741)
C4: (-81.277,-53.988,-10.345)
O5': (-79.968,-59.570,-10.700)
C3': (-80.220,-58.564,-13.455)
C1': (-82.061,-57.189,-12.891)
O4': (-82.116,-58.347,-12.120)
C5': (-80.768,-60.265,-11.618)
P: (-78.753,-60.279,-10.043)
O2: (-81.951,-54.592,-13.698)
C4': (-81.268,-59.353,-12.695)
C2': (-81.043,-57.420,-14.006)
O2': (-81.756,-57.856,-15.160)
N1: (-81.738,-56.062,-12.011)
N3: (-81.500,-53.755,-11.657)
N4: (-81.034,-52.942,-9.540)
C6: (-81.553,-56.286,-10.678)
C5: (-81.301,-55.303,-9.805)
O3': (-79.632,-59.344,-14.473)
Image (generated by PyMOL):