Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11952:12711
Extra
PDB:
ATOM 1 O3' A A1951 1.104 8.660 87.022 1.00 40.35 O
ATOM 2 P A A1952 1.368 7.850 88.349 1.00 40.01 P
ATOM 3 OP1 A A1952 0.579 6.571 88.251 1.00 39.98 O
ATOM 4 OP2 A A1952 1.114 8.780 89.471 1.00 40.31 O
ATOM 5 O5' A A1952 2.913 7.520 88.253 1.00 39.69 O
ATOM 6 C5' A A1952 3.376 6.370 87.565 1.00 39.39 C
ATOM 7 C4' A A1952 4.707 5.945 88.089 1.00 39.18 C
ATOM 8 O4' A A1952 5.733 6.891 87.657 1.00 39.08 O
ATOM 9 C3' A A1952 4.796 5.896 89.601 1.00 39.35 C
ATOM 10 O3' A A1952 4.502 4.602 90.075 1.00 39.32 O
ATOM 11 C2' A A1952 6.236 6.351 89.890 1.00 39.22 C
ATOM 12 O2' A A1952 7.150 5.265 89.773 1.00 38.94 O
ATOM 13 C1' A A1952 6.501 7.313 88.743 1.00 39.14 C
ATOM 14 N9 A A1952 6.112 8.704 89.062 1.00 39.42 N
ATOM 15 C8 A A1952 5.352 9.495 88.260 1.00 39.54 C
ATOM 16 N7 A A1952 5.178 10.693 88.723 1.00 39.79 N
ATOM 17 C5 A A1952 5.874 10.704 89.897 1.00 39.84 C
ATOM 18 C6 A A1952 6.071 11.674 90.871 1.00 40.08 C
ATOM 19 N6 A A1952 5.559 12.872 90.783 1.00 40.33 N
ATOM 20 N1 A A1952 6.807 11.405 91.963 1.00 40.09 N
ATOM 21 C2 A A1952 7.359 10.214 92.079 1.00 39.85 C
ATOM 22 N3 A A1952 7.238 9.217 91.226 1.00 39.61 N
ATOM 23 C4 A A1952 6.470 9.506 90.135 1.00 39.61 C
ATOM 24 P C A1953 3.764 4.379 91.444 1.00 33.15 P
ATOM 25 OP1 C A1953 3.529 2.946 91.594 1.00 33.07 O
ATOM 26 OP2 C A1953 2.654 5.255 91.439 1.00 33.43 O
ATOM 27 O5' C A1953 4.807 4.883 92.503 1.00 33.19 O
TER
ATOM 1 O3' A B2710 5.828 3.548 85.874 1.00 39.30 O
ATOM 2 P C B2711 5.176 2.128 85.516 1.00 39.88 P
ATOM 3 OP1 C B2711 4.775 1.532 86.785 1.00 40.03 O
ATOM 4 OP2 C B2711 6.104 1.397 84.697 1.00 39.59 O
ATOM 5 O5' C B2711 3.892 2.523 84.634 1.00 40.04 O
ATOM 6 C5' C B2711 2.945 3.483 85.072 1.00 40.33 C
ATOM 7 C4' C B2711 1.907 3.785 84.009 1.00 40.44 C
ATOM 8 O4' C B2711 2.503 4.558 82.955 1.00 40.32 O
ATOM 9 C3' C B2711 1.293 2.599 83.280 1.00 40.37 C
ATOM 10 O3' C B2711 0.260 1.952 83.997 1.00 40.56 O
ATOM 11 C2' C B2711 0.841 3.199 81.942 1.00 40.40 C
ATOM 12 O2' C B2711 -0.427 3.893 82.038 1.00 40.71 O
ATOM 13 C1' C B2711 1.946 4.206 81.698 1.00 40.28 C
ATOM 14 N1 C B2711 3.021 3.651 80.853 1.00 39.97 N
ATOM 15 C2 C B2711 2.856 3.645 79.483 1.00 39.91 C
ATOM 16 O2 C B2711 1.772 4.047 79.062 1.00 40.12 O
ATOM 17 N3 C B2711 3.821 3.189 78.648 1.00 39.65 N
ATOM 18 C4 C B2711 4.940 2.740 79.172 1.00 39.45 C
ATOM 19 N4 C B2711 5.854 2.307 78.345 1.00 39.21 N
ATOM 20 C5 C B2711 5.179 2.745 80.570 1.00 39.50 C
ATOM 21 C6 C B2711 4.205 3.213 81.361 1.00 39.77 C
ATOM 22 P C B2712 0.079 0.355 83.857 1.00 46.03 P
ATOM 23 OP1 C B2712 -0.985 -0.014 84.800 1.00 46.29 O
ATOM 24 OP2 C B2712 1.395 -0.276 83.998 1.00 45.76 O
ATOM 25 O5' C B2712 -0.426 0.194 82.378 1.00 45.99 O
TER
ATOM 2 P A A1952 1.368 7.850 88.349 1.00 40.01 P
ATOM 3 OP1 A A1952 0.579 6.571 88.251 1.00 39.98 O
ATOM 4 OP2 A A1952 1.114 8.780 89.471 1.00 40.31 O
ATOM 5 O5' A A1952 2.913 7.520 88.253 1.00 39.69 O
ATOM 6 C5' A A1952 3.376 6.370 87.565 1.00 39.39 C
ATOM 7 C4' A A1952 4.707 5.945 88.089 1.00 39.18 C
ATOM 8 O4' A A1952 5.733 6.891 87.657 1.00 39.08 O
ATOM 9 C3' A A1952 4.796 5.896 89.601 1.00 39.35 C
ATOM 10 O3' A A1952 4.502 4.602 90.075 1.00 39.32 O
ATOM 11 C2' A A1952 6.236 6.351 89.890 1.00 39.22 C
ATOM 12 O2' A A1952 7.150 5.265 89.773 1.00 38.94 O
ATOM 13 C1' A A1952 6.501 7.313 88.743 1.00 39.14 C
ATOM 14 N9 A A1952 6.112 8.704 89.062 1.00 39.42 N
ATOM 15 C8 A A1952 5.352 9.495 88.260 1.00 39.54 C
ATOM 16 N7 A A1952 5.178 10.693 88.723 1.00 39.79 N
ATOM 17 C5 A A1952 5.874 10.704 89.897 1.00 39.84 C
ATOM 18 C6 A A1952 6.071 11.674 90.871 1.00 40.08 C
ATOM 19 N6 A A1952 5.559 12.872 90.783 1.00 40.33 N
ATOM 20 N1 A A1952 6.807 11.405 91.963 1.00 40.09 N
ATOM 21 C2 A A1952 7.359 10.214 92.079 1.00 39.85 C
ATOM 22 N3 A A1952 7.238 9.217 91.226 1.00 39.61 N
ATOM 23 C4 A A1952 6.470 9.506 90.135 1.00 39.61 C
ATOM 24 P C A1953 3.764 4.379 91.444 1.00 33.15 P
ATOM 25 OP1 C A1953 3.529 2.946 91.594 1.00 33.07 O
ATOM 26 OP2 C A1953 2.654 5.255 91.439 1.00 33.43 O
ATOM 27 O5' C A1953 4.807 4.883 92.503 1.00 33.19 O
TER
ATOM 1 O3' A B2710 5.828 3.548 85.874 1.00 39.30 O
ATOM 2 P C B2711 5.176 2.128 85.516 1.00 39.88 P
ATOM 3 OP1 C B2711 4.775 1.532 86.785 1.00 40.03 O
ATOM 4 OP2 C B2711 6.104 1.397 84.697 1.00 39.59 O
ATOM 5 O5' C B2711 3.892 2.523 84.634 1.00 40.04 O
ATOM 6 C5' C B2711 2.945 3.483 85.072 1.00 40.33 C
ATOM 7 C4' C B2711 1.907 3.785 84.009 1.00 40.44 C
ATOM 8 O4' C B2711 2.503 4.558 82.955 1.00 40.32 O
ATOM 9 C3' C B2711 1.293 2.599 83.280 1.00 40.37 C
ATOM 10 O3' C B2711 0.260 1.952 83.997 1.00 40.56 O
ATOM 11 C2' C B2711 0.841 3.199 81.942 1.00 40.40 C
ATOM 12 O2' C B2711 -0.427 3.893 82.038 1.00 40.71 O
ATOM 13 C1' C B2711 1.946 4.206 81.698 1.00 40.28 C
ATOM 14 N1 C B2711 3.021 3.651 80.853 1.00 39.97 N
ATOM 15 C2 C B2711 2.856 3.645 79.483 1.00 39.91 C
ATOM 16 O2 C B2711 1.772 4.047 79.062 1.00 40.12 O
ATOM 17 N3 C B2711 3.821 3.189 78.648 1.00 39.65 N
ATOM 18 C4 C B2711 4.940 2.740 79.172 1.00 39.45 C
ATOM 19 N4 C B2711 5.854 2.307 78.345 1.00 39.21 N
ATOM 20 C5 C B2711 5.179 2.745 80.570 1.00 39.50 C
ATOM 21 C6 C B2711 4.205 3.213 81.361 1.00 39.77 C
ATOM 22 P C B2712 0.079 0.355 83.857 1.00 46.03 P
ATOM 23 OP1 C B2712 -0.985 -0.014 84.800 1.00 46.29 O
ATOM 24 OP2 C B2712 1.395 -0.276 83.998 1.00 45.76 O
ATOM 25 O5' C B2712 -0.426 0.194 82.378 1.00 45.99 O
TER
Atoms:
OP1: (0.579,6.571,88.251)
OP2: (1.114,8.780,89.471)
C3': (4.796,5.896,89.601)
C1': (6.501,7.313,88.743)
C5': (3.376,6.370,87.565)
O4': (5.733,6.891,87.657)
C8: (5.352,9.495,88.260)
O2': (7.150,5.265,89.773)
C6: (6.071,11.674,90.871)
C5: (5.874,10.704,89.897)
C4: (6.470,9.506,90.135)
P: (1.368,7.850,88.349)
C4': (4.707,5.945,88.089)
C2': (6.236,6.351,89.890)
C2: (7.359,10.214,92.079)
N1: (6.807,11.405,91.963)
N3: (7.238,9.217,91.226)
N6: (5.559,12.872,90.783)
N7: (5.178,10.693,88.723)
N9: (6.112,8.704,89.062)
O5': (2.913,7.520,88.253)
O3': (4.502,4.602,90.075)
OP2: (1.114,8.780,89.471)
C3': (4.796,5.896,89.601)
C1': (6.501,7.313,88.743)
C5': (3.376,6.370,87.565)
O4': (5.733,6.891,87.657)
C8: (5.352,9.495,88.260)
O2': (7.150,5.265,89.773)
C6: (6.071,11.674,90.871)
C5: (5.874,10.704,89.897)
C4: (6.470,9.506,90.135)
P: (1.368,7.850,88.349)
C4': (4.707,5.945,88.089)
C2': (6.236,6.351,89.890)
C2: (7.359,10.214,92.079)
N1: (6.807,11.405,91.963)
N3: (7.238,9.217,91.226)
N6: (5.559,12.872,90.783)
N7: (5.178,10.693,88.723)
N9: (6.112,8.704,89.062)
O5': (2.913,7.520,88.253)
O3': (4.502,4.602,90.075)
C2: (2.856,3.645,79.483)
OP1: (4.775,1.532,86.785)
OP2: (6.104,1.397,84.697)
C4: (4.940,2.740,79.172)
O5': (3.892,2.523,84.634)
C3': (1.293,2.599,83.280)
C1': (1.946,4.206,81.698)
O4': (2.503,4.558,82.955)
C5': (2.945,3.483,85.072)
P: (5.176,2.128,85.516)
O2: (1.772,4.047,79.062)
C4': (1.907,3.785,84.009)
C2': (0.841,3.199,81.942)
O2': (-0.427,3.893,82.038)
N1: (3.021,3.651,80.853)
N3: (3.821,3.189,78.648)
N4: (5.854,2.307,78.345)
C6: (4.205,3.213,81.361)
C5: (5.179,2.745,80.570)
O3': (0.260,1.952,83.997)
OP1: (4.775,1.532,86.785)
OP2: (6.104,1.397,84.697)
C4: (4.940,2.740,79.172)
O5': (3.892,2.523,84.634)
C3': (1.293,2.599,83.280)
C1': (1.946,4.206,81.698)
O4': (2.503,4.558,82.955)
C5': (2.945,3.483,85.072)
P: (5.176,2.128,85.516)
O2: (1.772,4.047,79.062)
C4': (1.907,3.785,84.009)
C2': (0.841,3.199,81.942)
O2': (-0.427,3.893,82.038)
N1: (3.021,3.651,80.853)
N3: (3.821,3.189,78.648)
N4: (5.854,2.307,78.345)
C6: (4.205,3.213,81.361)
C5: (5.179,2.745,80.570)
O3': (0.260,1.952,83.997)
Image (generated by PyMOL):