Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQL:0613:01003
Extra
PDB:
ATOM 1 O3' U A 612 50.503 107.232 85.469 1.00 33.25 O
ATOM 2 P U A 613 50.250 105.660 85.573 1.00 35.78 P
ATOM 3 OP1 U A 613 51.529 105.043 85.158 1.00 29.93 O
ATOM 4 OP2 U A 613 49.007 105.350 84.837 1.00 33.20 O
ATOM 5 O5' U A 613 49.965 105.375 87.121 1.00 35.49 O
ATOM 6 C5' U A 613 51.001 105.486 88.100 1.00 34.12 C
ATOM 7 C4' U A 613 50.433 105.427 89.506 1.00 33.77 C
ATOM 8 O4' U A 613 49.393 106.425 89.678 1.00 34.92 O
ATOM 9 C3' U A 613 49.714 104.172 89.983 1.00 33.07 C
ATOM 10 O3' U A 613 50.625 103.120 90.292 1.00 34.83 O
ATOM 11 C2' U A 613 49.080 104.697 91.267 1.00 32.39 C
ATOM 12 O2' U A 613 50.044 104.859 92.288 1.00 32.42 O
ATOM 13 C1' U A 613 48.638 106.097 90.836 1.00 32.67 C
ATOM 14 N1 U A 613 47.203 106.144 90.518 1.00 34.31 N
ATOM 15 C2 U A 613 46.319 106.371 91.576 1.00 34.99 C
ATOM 16 O2 U A 613 46.683 106.568 92.728 1.00 34.74 O
ATOM 17 N3 U A 613 44.994 106.357 91.234 1.00 35.71 N
ATOM 18 C4 U A 613 44.461 106.151 89.981 1.00 34.63 C
ATOM 19 O4 U A 613 43.241 106.156 89.845 1.00 31.93 O
ATOM 20 C5 U A 613 45.431 105.945 88.938 1.00 33.97 C
ATOM 21 C6 U A 613 46.737 105.950 89.236 1.00 31.38 C
ATOM 22 P U A 614 50.223 101.594 89.984 1.00 35.65 P
ATOM 23 OP1 U A 614 51.431 100.747 90.134 1.00 33.12 O
ATOM 24 OP2 U A 614 49.472 101.550 88.713 1.00 34.58 O
ATOM 25 O5' U A 614 49.209 101.238 91.158 1.00 36.06 O
TER
ATOM 1 O3' C B1002 53.972 93.596 84.717 1.00 39.29 O
ATOM 2 P C B1003 55.058 94.770 84.814 1.00 39.97 P
ATOM 3 OP1 C B1003 55.588 95.027 83.446 1.00 40.98 O
ATOM 4 OP2 C B1003 55.992 94.370 85.896 1.00 42.52 O
ATOM 5 O5' C B1003 54.258 96.076 85.256 1.00 37.83 O
ATOM 6 C5' C B1003 53.454 96.102 86.429 1.00 37.26 C
ATOM 7 C4' C B1003 54.231 96.660 87.601 1.00 39.08 C
ATOM 8 O4' C B1003 54.600 98.061 87.372 1.00 38.79 O
ATOM 9 C3' C B1003 53.425 96.651 88.906 1.00 38.31 C
ATOM 10 O3' C B1003 54.272 96.304 89.995 1.00 41.05 O
ATOM 11 C2' C B1003 53.016 98.113 89.045 1.00 38.34 C
ATOM 12 O2' C B1003 52.741 98.523 90.361 1.00 39.61 O
ATOM 13 C1' C B1003 54.275 98.800 88.537 1.00 38.80 C
ATOM 14 N1 C B1003 54.111 100.240 88.232 1.00 38.33 N
ATOM 15 C2 C B1003 54.666 101.179 89.126 1.00 38.71 C
ATOM 16 O2 C B1003 55.296 100.776 90.112 1.00 45.25 O
ATOM 17 N3 C B1003 54.508 102.496 88.891 1.00 36.93 N
ATOM 18 C4 C B1003 53.847 102.901 87.810 1.00 36.79 C
ATOM 19 N4 C B1003 53.743 104.210 87.611 1.00 35.64 N
ATOM 20 C5 C B1003 53.272 101.976 86.881 1.00 35.62 C
ATOM 21 C6 C B1003 53.430 100.668 87.127 1.00 35.71 C
ATOM 22 P G B1004 54.715 94.776 90.210 1.00 43.45 P
ATOM 23 OP1 G B1004 55.988 94.755 90.968 1.00 47.89 O
ATOM 24 OP2 G B1004 54.638 94.084 88.907 1.00 47.81 O
ATOM 25 O5' G B1004 53.623 94.155 91.192 1.00 46.35 O
TER
ATOM 2 P U A 613 50.250 105.660 85.573 1.00 35.78 P
ATOM 3 OP1 U A 613 51.529 105.043 85.158 1.00 29.93 O
ATOM 4 OP2 U A 613 49.007 105.350 84.837 1.00 33.20 O
ATOM 5 O5' U A 613 49.965 105.375 87.121 1.00 35.49 O
ATOM 6 C5' U A 613 51.001 105.486 88.100 1.00 34.12 C
ATOM 7 C4' U A 613 50.433 105.427 89.506 1.00 33.77 C
ATOM 8 O4' U A 613 49.393 106.425 89.678 1.00 34.92 O
ATOM 9 C3' U A 613 49.714 104.172 89.983 1.00 33.07 C
ATOM 10 O3' U A 613 50.625 103.120 90.292 1.00 34.83 O
ATOM 11 C2' U A 613 49.080 104.697 91.267 1.00 32.39 C
ATOM 12 O2' U A 613 50.044 104.859 92.288 1.00 32.42 O
ATOM 13 C1' U A 613 48.638 106.097 90.836 1.00 32.67 C
ATOM 14 N1 U A 613 47.203 106.144 90.518 1.00 34.31 N
ATOM 15 C2 U A 613 46.319 106.371 91.576 1.00 34.99 C
ATOM 16 O2 U A 613 46.683 106.568 92.728 1.00 34.74 O
ATOM 17 N3 U A 613 44.994 106.357 91.234 1.00 35.71 N
ATOM 18 C4 U A 613 44.461 106.151 89.981 1.00 34.63 C
ATOM 19 O4 U A 613 43.241 106.156 89.845 1.00 31.93 O
ATOM 20 C5 U A 613 45.431 105.945 88.938 1.00 33.97 C
ATOM 21 C6 U A 613 46.737 105.950 89.236 1.00 31.38 C
ATOM 22 P U A 614 50.223 101.594 89.984 1.00 35.65 P
ATOM 23 OP1 U A 614 51.431 100.747 90.134 1.00 33.12 O
ATOM 24 OP2 U A 614 49.472 101.550 88.713 1.00 34.58 O
ATOM 25 O5' U A 614 49.209 101.238 91.158 1.00 36.06 O
TER
ATOM 1 O3' C B1002 53.972 93.596 84.717 1.00 39.29 O
ATOM 2 P C B1003 55.058 94.770 84.814 1.00 39.97 P
ATOM 3 OP1 C B1003 55.588 95.027 83.446 1.00 40.98 O
ATOM 4 OP2 C B1003 55.992 94.370 85.896 1.00 42.52 O
ATOM 5 O5' C B1003 54.258 96.076 85.256 1.00 37.83 O
ATOM 6 C5' C B1003 53.454 96.102 86.429 1.00 37.26 C
ATOM 7 C4' C B1003 54.231 96.660 87.601 1.00 39.08 C
ATOM 8 O4' C B1003 54.600 98.061 87.372 1.00 38.79 O
ATOM 9 C3' C B1003 53.425 96.651 88.906 1.00 38.31 C
ATOM 10 O3' C B1003 54.272 96.304 89.995 1.00 41.05 O
ATOM 11 C2' C B1003 53.016 98.113 89.045 1.00 38.34 C
ATOM 12 O2' C B1003 52.741 98.523 90.361 1.00 39.61 O
ATOM 13 C1' C B1003 54.275 98.800 88.537 1.00 38.80 C
ATOM 14 N1 C B1003 54.111 100.240 88.232 1.00 38.33 N
ATOM 15 C2 C B1003 54.666 101.179 89.126 1.00 38.71 C
ATOM 16 O2 C B1003 55.296 100.776 90.112 1.00 45.25 O
ATOM 17 N3 C B1003 54.508 102.496 88.891 1.00 36.93 N
ATOM 18 C4 C B1003 53.847 102.901 87.810 1.00 36.79 C
ATOM 19 N4 C B1003 53.743 104.210 87.611 1.00 35.64 N
ATOM 20 C5 C B1003 53.272 101.976 86.881 1.00 35.62 C
ATOM 21 C6 C B1003 53.430 100.668 87.127 1.00 35.71 C
ATOM 22 P G B1004 54.715 94.776 90.210 1.00 43.45 P
ATOM 23 OP1 G B1004 55.988 94.755 90.968 1.00 47.89 O
ATOM 24 OP2 G B1004 54.638 94.084 88.907 1.00 47.81 O
ATOM 25 O5' G B1004 53.623 94.155 91.192 1.00 46.35 O
TER
Atoms:
C4: (44.461,106.151,89.981)
N3: (44.994,106.357,91.234)
OP1: (51.529,105.043,85.158)
OP2: (49.007,105.350,84.837)
C2: (46.319,106.371,91.576)
C1': (48.638,106.097,90.836)
C3': (49.714,104.172,89.983)
O5': (49.965,105.375,87.121)
O4': (49.393,106.425,89.678)
C5': (51.001,105.486,88.100)
P: (50.250,105.660,85.573)
C4': (50.433,105.427,89.506)
C2': (49.080,104.697,91.267)
O2': (50.044,104.859,92.288)
N1: (47.203,106.144,90.518)
O4: (43.241,106.156,89.845)
O2: (46.683,106.568,92.728)
C6: (46.737,105.950,89.236)
C5: (45.431,105.945,88.938)
O3': (50.625,103.120,90.292)
N3: (44.994,106.357,91.234)
OP1: (51.529,105.043,85.158)
OP2: (49.007,105.350,84.837)
C2: (46.319,106.371,91.576)
C1': (48.638,106.097,90.836)
C3': (49.714,104.172,89.983)
O5': (49.965,105.375,87.121)
O4': (49.393,106.425,89.678)
C5': (51.001,105.486,88.100)
P: (50.250,105.660,85.573)
C4': (50.433,105.427,89.506)
C2': (49.080,104.697,91.267)
O2': (50.044,104.859,92.288)
N1: (47.203,106.144,90.518)
O4: (43.241,106.156,89.845)
O2: (46.683,106.568,92.728)
C6: (46.737,105.950,89.236)
C5: (45.431,105.945,88.938)
O3': (50.625,103.120,90.292)
C2: (54.666,101.179,89.126)
OP1: (55.588,95.027,83.446)
OP2: (55.992,94.370,85.896)
C4: (53.847,102.901,87.810)
O5': (54.258,96.076,85.256)
C3': (53.425,96.651,88.906)
C1': (54.275,98.800,88.537)
O4': (54.600,98.061,87.372)
C5': (53.454,96.102,86.429)
P: (55.058,94.770,84.814)
O2: (55.296,100.776,90.112)
C4': (54.231,96.660,87.601)
C2': (53.016,98.113,89.045)
O2': (52.741,98.523,90.361)
N1: (54.111,100.240,88.232)
N3: (54.508,102.496,88.891)
N4: (53.743,104.210,87.611)
C6: (53.430,100.668,87.127)
C5: (53.272,101.976,86.881)
O3': (54.272,96.304,89.995)
OP1: (55.588,95.027,83.446)
OP2: (55.992,94.370,85.896)
C4: (53.847,102.901,87.810)
O5': (54.258,96.076,85.256)
C3': (53.425,96.651,88.906)
C1': (54.275,98.800,88.537)
O4': (54.600,98.061,87.372)
C5': (53.454,96.102,86.429)
P: (55.058,94.770,84.814)
O2: (55.296,100.776,90.112)
C4': (54.231,96.660,87.601)
C2': (53.016,98.113,89.045)
O2': (52.741,98.523,90.361)
N1: (54.111,100.240,88.232)
N3: (54.508,102.496,88.891)
N4: (53.743,104.210,87.611)
C6: (53.430,100.668,87.127)
C5: (53.272,101.976,86.881)
O3': (54.272,96.304,89.995)
Image (generated by PyMOL):