Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2OTJ:0613:01003
Extra
PDB:
ATOM 1 O3' U A 612 50.634 107.564 85.446 1.00 37.14 O
ATOM 2 P U A 613 50.245 106.010 85.480 1.00 38.24 P
ATOM 3 OP1 U A 613 51.430 105.239 85.036 1.00 38.12 O
ATOM 4 OP2 U A 613 48.962 105.880 84.749 1.00 39.00 O
ATOM 5 O5' U A 613 49.972 105.678 87.017 1.00 38.67 O
ATOM 6 C5' U A 613 51.003 105.850 87.991 1.00 38.15 C
ATOM 7 C4' U A 613 50.435 105.835 89.387 1.00 38.00 C
ATOM 8 O4' U A 613 49.366 106.800 89.499 1.00 38.91 O
ATOM 9 C3' U A 613 49.711 104.593 89.873 1.00 37.70 C
ATOM 10 O3' U A 613 50.601 103.523 90.172 1.00 36.54 O
ATOM 11 C2' U A 613 49.072 105.138 91.145 1.00 38.19 C
ATOM 12 O2' U A 613 50.011 105.322 92.179 1.00 38.02 O
ATOM 13 C1' U A 613 48.654 106.535 90.694 1.00 39.15 C
ATOM 14 N1 U A 613 47.213 106.614 90.437 1.00 41.08 N
ATOM 15 C2 U A 613 46.386 106.759 91.535 1.00 41.97 C
ATOM 16 O2 U A 613 46.808 106.854 92.675 1.00 42.01 O
ATOM 17 N3 U A 613 45.046 106.777 91.253 1.00 42.88 N
ATOM 18 C4 U A 613 44.458 106.661 90.016 1.00 43.64 C
ATOM 19 O4 U A 613 43.234 106.549 89.943 1.00 44.83 O
ATOM 20 C5 U A 613 45.381 106.541 88.927 1.00 43.30 C
ATOM 21 C6 U A 613 46.697 106.526 89.170 1.00 42.00 C
ATOM 22 P U A 614 50.168 102.016 89.839 1.00 35.89 P
ATOM 23 OP1 U A 614 51.305 101.111 90.110 1.00 35.67 O
ATOM 24 OP2 U A 614 49.538 102.010 88.507 1.00 35.66 O
ATOM 25 O5' U A 614 49.029 101.737 90.907 1.00 36.42 O
TER
ATOM 1 O3' C B1002 54.045 94.013 84.558 1.00 37.70 O
ATOM 2 P C B1003 55.064 95.251 84.658 1.00 38.90 P
ATOM 3 OP1 C B1003 55.701 95.419 83.329 1.00 39.59 O
ATOM 4 OP2 C B1003 55.907 95.014 85.848 1.00 38.95 O
ATOM 5 O5' C B1003 54.153 96.523 84.969 1.00 37.31 O
ATOM 6 C5' C B1003 53.342 96.585 86.153 1.00 37.56 C
ATOM 7 C4' C B1003 54.160 97.070 87.331 1.00 38.21 C
ATOM 8 O4' C B1003 54.560 98.458 87.124 1.00 38.26 O
ATOM 9 C3' C B1003 53.433 97.049 88.678 1.00 38.40 C
ATOM 10 O3' C B1003 54.355 96.660 89.685 1.00 38.51 O
ATOM 11 C2' C B1003 53.071 98.516 88.883 1.00 38.56 C
ATOM 12 O2' C B1003 52.913 98.875 90.238 1.00 39.39 O
ATOM 13 C1' C B1003 54.306 99.187 88.303 1.00 38.43 C
ATOM 14 N1 C B1003 54.149 100.618 87.986 1.00 38.60 N
ATOM 15 C2 C B1003 54.720 101.574 88.863 1.00 39.48 C
ATOM 16 O2 C B1003 55.365 101.183 89.856 1.00 41.21 O
ATOM 17 N3 C B1003 54.558 102.889 88.607 1.00 38.64 N
ATOM 18 C4 C B1003 53.878 103.273 87.533 1.00 39.06 C
ATOM 19 N4 C B1003 53.747 104.574 87.330 1.00 39.99 N
ATOM 20 C5 C B1003 53.302 102.333 86.619 1.00 38.52 C
ATOM 21 C6 C B1003 53.461 101.029 86.881 1.00 37.63 C
ATOM 22 P G B1004 54.678 95.105 89.910 1.00 39.12 P
ATOM 23 OP1 G B1004 56.034 95.010 90.465 1.00 41.81 O
ATOM 24 OP2 G B1004 54.350 94.369 88.675 1.00 39.32 O
ATOM 25 O5' G B1004 53.674 94.651 91.060 1.00 39.65 O
TER
ATOM 2 P U A 613 50.245 106.010 85.480 1.00 38.24 P
ATOM 3 OP1 U A 613 51.430 105.239 85.036 1.00 38.12 O
ATOM 4 OP2 U A 613 48.962 105.880 84.749 1.00 39.00 O
ATOM 5 O5' U A 613 49.972 105.678 87.017 1.00 38.67 O
ATOM 6 C5' U A 613 51.003 105.850 87.991 1.00 38.15 C
ATOM 7 C4' U A 613 50.435 105.835 89.387 1.00 38.00 C
ATOM 8 O4' U A 613 49.366 106.800 89.499 1.00 38.91 O
ATOM 9 C3' U A 613 49.711 104.593 89.873 1.00 37.70 C
ATOM 10 O3' U A 613 50.601 103.523 90.172 1.00 36.54 O
ATOM 11 C2' U A 613 49.072 105.138 91.145 1.00 38.19 C
ATOM 12 O2' U A 613 50.011 105.322 92.179 1.00 38.02 O
ATOM 13 C1' U A 613 48.654 106.535 90.694 1.00 39.15 C
ATOM 14 N1 U A 613 47.213 106.614 90.437 1.00 41.08 N
ATOM 15 C2 U A 613 46.386 106.759 91.535 1.00 41.97 C
ATOM 16 O2 U A 613 46.808 106.854 92.675 1.00 42.01 O
ATOM 17 N3 U A 613 45.046 106.777 91.253 1.00 42.88 N
ATOM 18 C4 U A 613 44.458 106.661 90.016 1.00 43.64 C
ATOM 19 O4 U A 613 43.234 106.549 89.943 1.00 44.83 O
ATOM 20 C5 U A 613 45.381 106.541 88.927 1.00 43.30 C
ATOM 21 C6 U A 613 46.697 106.526 89.170 1.00 42.00 C
ATOM 22 P U A 614 50.168 102.016 89.839 1.00 35.89 P
ATOM 23 OP1 U A 614 51.305 101.111 90.110 1.00 35.67 O
ATOM 24 OP2 U A 614 49.538 102.010 88.507 1.00 35.66 O
ATOM 25 O5' U A 614 49.029 101.737 90.907 1.00 36.42 O
TER
ATOM 1 O3' C B1002 54.045 94.013 84.558 1.00 37.70 O
ATOM 2 P C B1003 55.064 95.251 84.658 1.00 38.90 P
ATOM 3 OP1 C B1003 55.701 95.419 83.329 1.00 39.59 O
ATOM 4 OP2 C B1003 55.907 95.014 85.848 1.00 38.95 O
ATOM 5 O5' C B1003 54.153 96.523 84.969 1.00 37.31 O
ATOM 6 C5' C B1003 53.342 96.585 86.153 1.00 37.56 C
ATOM 7 C4' C B1003 54.160 97.070 87.331 1.00 38.21 C
ATOM 8 O4' C B1003 54.560 98.458 87.124 1.00 38.26 O
ATOM 9 C3' C B1003 53.433 97.049 88.678 1.00 38.40 C
ATOM 10 O3' C B1003 54.355 96.660 89.685 1.00 38.51 O
ATOM 11 C2' C B1003 53.071 98.516 88.883 1.00 38.56 C
ATOM 12 O2' C B1003 52.913 98.875 90.238 1.00 39.39 O
ATOM 13 C1' C B1003 54.306 99.187 88.303 1.00 38.43 C
ATOM 14 N1 C B1003 54.149 100.618 87.986 1.00 38.60 N
ATOM 15 C2 C B1003 54.720 101.574 88.863 1.00 39.48 C
ATOM 16 O2 C B1003 55.365 101.183 89.856 1.00 41.21 O
ATOM 17 N3 C B1003 54.558 102.889 88.607 1.00 38.64 N
ATOM 18 C4 C B1003 53.878 103.273 87.533 1.00 39.06 C
ATOM 19 N4 C B1003 53.747 104.574 87.330 1.00 39.99 N
ATOM 20 C5 C B1003 53.302 102.333 86.619 1.00 38.52 C
ATOM 21 C6 C B1003 53.461 101.029 86.881 1.00 37.63 C
ATOM 22 P G B1004 54.678 95.105 89.910 1.00 39.12 P
ATOM 23 OP1 G B1004 56.034 95.010 90.465 1.00 41.81 O
ATOM 24 OP2 G B1004 54.350 94.369 88.675 1.00 39.32 O
ATOM 25 O5' G B1004 53.674 94.651 91.060 1.00 39.65 O
TER
Atoms:
C4: (44.458,106.661,90.016)
N3: (45.046,106.777,91.253)
OP1: (51.430,105.239,85.036)
OP2: (48.962,105.880,84.749)
C2: (46.386,106.759,91.535)
C1': (48.654,106.535,90.694)
C3': (49.711,104.593,89.873)
O5': (49.972,105.678,87.017)
O4': (49.366,106.800,89.499)
C5': (51.003,105.850,87.991)
P: (50.245,106.010,85.480)
C4': (50.435,105.835,89.387)
C2': (49.072,105.138,91.145)
O2': (50.011,105.322,92.179)
N1: (47.213,106.614,90.437)
O4: (43.234,106.549,89.943)
O2: (46.808,106.854,92.675)
C6: (46.697,106.526,89.170)
C5: (45.381,106.541,88.927)
O3': (50.601,103.523,90.172)
N3: (45.046,106.777,91.253)
OP1: (51.430,105.239,85.036)
OP2: (48.962,105.880,84.749)
C2: (46.386,106.759,91.535)
C1': (48.654,106.535,90.694)
C3': (49.711,104.593,89.873)
O5': (49.972,105.678,87.017)
O4': (49.366,106.800,89.499)
C5': (51.003,105.850,87.991)
P: (50.245,106.010,85.480)
C4': (50.435,105.835,89.387)
C2': (49.072,105.138,91.145)
O2': (50.011,105.322,92.179)
N1: (47.213,106.614,90.437)
O4: (43.234,106.549,89.943)
O2: (46.808,106.854,92.675)
C6: (46.697,106.526,89.170)
C5: (45.381,106.541,88.927)
O3': (50.601,103.523,90.172)
C2: (54.720,101.574,88.863)
OP1: (55.701,95.419,83.329)
OP2: (55.907,95.014,85.848)
C4: (53.878,103.273,87.533)
O5': (54.153,96.523,84.969)
C3': (53.433,97.049,88.678)
C1': (54.306,99.187,88.303)
O4': (54.560,98.458,87.124)
C5': (53.342,96.585,86.153)
P: (55.064,95.251,84.658)
O2: (55.365,101.183,89.856)
C4': (54.160,97.070,87.331)
C2': (53.071,98.516,88.883)
O2': (52.913,98.875,90.238)
N1: (54.149,100.618,87.986)
N3: (54.558,102.889,88.607)
N4: (53.747,104.574,87.330)
C6: (53.461,101.029,86.881)
C5: (53.302,102.333,86.619)
O3': (54.355,96.660,89.685)
OP1: (55.701,95.419,83.329)
OP2: (55.907,95.014,85.848)
C4: (53.878,103.273,87.533)
O5': (54.153,96.523,84.969)
C3': (53.433,97.049,88.678)
C1': (54.306,99.187,88.303)
O4': (54.560,98.458,87.124)
C5': (53.342,96.585,86.153)
P: (55.064,95.251,84.658)
O2: (55.365,101.183,89.856)
C4': (54.160,97.070,87.331)
C2': (53.071,98.516,88.883)
O2': (52.913,98.875,90.238)
N1: (54.149,100.618,87.986)
N3: (54.558,102.889,88.607)
N4: (53.747,104.574,87.330)
C6: (53.461,101.029,86.881)
C5: (53.302,102.333,86.619)
O3': (54.355,96.660,89.685)
Image (generated by PyMOL):