Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0117:0118
Extra
PDB:
ATOM 1 P A A 117 84.505 156.359 20.725 1.00 84.68 P
ATOM 2 OP1 A A 117 84.521 155.682 19.396 1.00 82.22 O
ATOM 3 OP2 A A 117 83.272 157.067 21.179 1.00 83.86 O
ATOM 4 O5' A A 117 84.849 155.287 21.847 1.00 80.59 O
ATOM 5 C5' A A 117 86.066 154.518 21.785 1.00 72.66 C
ATOM 6 C4' A A 117 86.115 153.544 22.934 1.00 66.72 C
ATOM 7 O4' A A 117 86.499 154.229 24.161 1.00 62.86 O
ATOM 8 C3' A A 117 84.775 152.909 23.273 1.00 64.38 C
ATOM 9 O3' A A 117 84.273 151.972 22.297 1.00 62.12 O
ATOM 10 C2' A A 117 84.957 152.505 24.733 1.00 61.52 C
ATOM 11 O2' A A 117 85.678 151.314 24.945 1.00 60.25 O
ATOM 12 C1' A A 117 85.771 153.693 25.261 1.00 58.70 C
ATOM 13 N9 A A 117 84.947 154.761 25.842 1.00 52.79 N
ATOM 14 C8 A A 117 83.592 154.939 25.703 1.00 50.74 C
ATOM 15 N7 A A 117 83.119 155.962 26.369 1.00 49.49 N
ATOM 16 C5 A A 117 84.236 156.507 26.981 1.00 47.28 C
ATOM 17 C6 A A 117 84.394 157.609 27.836 1.00 46.67 C
ATOM 18 N6 A A 117 83.384 158.382 28.235 1.00 44.39 N
ATOM 19 N1 A A 117 85.639 157.890 28.277 1.00 47.24 N
ATOM 20 C2 A A 117 86.652 157.102 27.878 1.00 49.02 C
ATOM 21 N3 A A 117 86.628 156.033 27.078 1.00 49.36 N
ATOM 22 C4 A A 117 85.373 155.784 26.660 1.00 49.76 C
ATOM 23 P C A 118 85.101 150.648 21.905 1.00 62.05 P
ATOM 24 OP1 C A 118 86.353 150.573 22.705 1.00 63.44 O
ATOM 25 OP2 C A 118 85.189 150.611 20.426 1.00 62.06 O
ATOM 26 O5' C A 118 84.132 149.456 22.326 1.00 61.56 O
TER
ATOM 1 O3' A B 117 84.273 151.972 22.297 1.00 62.12 O
ATOM 2 P C B 118 85.101 150.648 21.905 1.00 62.05 P
ATOM 3 OP1 C B 118 86.353 150.573 22.705 1.00 63.44 O
ATOM 4 OP2 C B 118 85.189 150.611 20.426 1.00 62.06 O
ATOM 5 O5' C B 118 84.132 149.456 22.326 1.00 61.56 O
ATOM 6 C5' C B 118 83.398 149.486 23.566 1.00 57.35 C
ATOM 7 C4' C B 118 83.076 148.082 24.012 1.00 54.15 C
ATOM 8 O4' C B 118 82.192 147.444 23.053 1.00 55.05 O
ATOM 9 C3' C B 118 84.265 147.144 24.079 1.00 52.59 C
ATOM 10 O3' C B 118 84.991 147.333 25.284 1.00 50.03 O
ATOM 11 C2' C B 118 83.594 145.778 24.005 1.00 52.90 C
ATOM 12 O2' C B 118 82.981 145.392 25.215 1.00 53.89 O
ATOM 13 C1' C B 118 82.477 146.052 22.999 1.00 54.78 C
ATOM 14 N1 C B 118 82.838 145.670 21.617 1.00 56.64 N
ATOM 15 C2 C B 118 83.034 144.306 21.325 1.00 57.66 C
ATOM 16 O2 C B 118 82.886 143.468 22.229 1.00 57.53 O
ATOM 17 N3 C B 118 83.381 143.941 20.066 1.00 57.99 N
ATOM 18 C4 C B 118 83.529 144.869 19.117 1.00 57.07 C
ATOM 19 N4 C B 118 83.880 144.462 17.893 1.00 55.98 N
ATOM 20 C5 C B 118 83.326 146.257 19.383 1.00 56.88 C
ATOM 21 C6 C B 118 82.986 146.610 20.632 1.00 56.08 C
ATOM 22 P A B 119 86.560 147.653 25.226 1.00 47.28 P
ATOM 23 OP1 A B 119 86.686 149.106 25.029 1.00 47.43 O
ATOM 24 OP2 A B 119 87.211 146.727 24.269 1.00 47.72 O
ATOM 25 O5' A B 119 87.078 147.287 26.686 1.00 45.01 O
TER
ATOM 2 OP1 A A 117 84.521 155.682 19.396 1.00 82.22 O
ATOM 3 OP2 A A 117 83.272 157.067 21.179 1.00 83.86 O
ATOM 4 O5' A A 117 84.849 155.287 21.847 1.00 80.59 O
ATOM 5 C5' A A 117 86.066 154.518 21.785 1.00 72.66 C
ATOM 6 C4' A A 117 86.115 153.544 22.934 1.00 66.72 C
ATOM 7 O4' A A 117 86.499 154.229 24.161 1.00 62.86 O
ATOM 8 C3' A A 117 84.775 152.909 23.273 1.00 64.38 C
ATOM 9 O3' A A 117 84.273 151.972 22.297 1.00 62.12 O
ATOM 10 C2' A A 117 84.957 152.505 24.733 1.00 61.52 C
ATOM 11 O2' A A 117 85.678 151.314 24.945 1.00 60.25 O
ATOM 12 C1' A A 117 85.771 153.693 25.261 1.00 58.70 C
ATOM 13 N9 A A 117 84.947 154.761 25.842 1.00 52.79 N
ATOM 14 C8 A A 117 83.592 154.939 25.703 1.00 50.74 C
ATOM 15 N7 A A 117 83.119 155.962 26.369 1.00 49.49 N
ATOM 16 C5 A A 117 84.236 156.507 26.981 1.00 47.28 C
ATOM 17 C6 A A 117 84.394 157.609 27.836 1.00 46.67 C
ATOM 18 N6 A A 117 83.384 158.382 28.235 1.00 44.39 N
ATOM 19 N1 A A 117 85.639 157.890 28.277 1.00 47.24 N
ATOM 20 C2 A A 117 86.652 157.102 27.878 1.00 49.02 C
ATOM 21 N3 A A 117 86.628 156.033 27.078 1.00 49.36 N
ATOM 22 C4 A A 117 85.373 155.784 26.660 1.00 49.76 C
ATOM 23 P C A 118 85.101 150.648 21.905 1.00 62.05 P
ATOM 24 OP1 C A 118 86.353 150.573 22.705 1.00 63.44 O
ATOM 25 OP2 C A 118 85.189 150.611 20.426 1.00 62.06 O
ATOM 26 O5' C A 118 84.132 149.456 22.326 1.00 61.56 O
TER
ATOM 1 O3' A B 117 84.273 151.972 22.297 1.00 62.12 O
ATOM 2 P C B 118 85.101 150.648 21.905 1.00 62.05 P
ATOM 3 OP1 C B 118 86.353 150.573 22.705 1.00 63.44 O
ATOM 4 OP2 C B 118 85.189 150.611 20.426 1.00 62.06 O
ATOM 5 O5' C B 118 84.132 149.456 22.326 1.00 61.56 O
ATOM 6 C5' C B 118 83.398 149.486 23.566 1.00 57.35 C
ATOM 7 C4' C B 118 83.076 148.082 24.012 1.00 54.15 C
ATOM 8 O4' C B 118 82.192 147.444 23.053 1.00 55.05 O
ATOM 9 C3' C B 118 84.265 147.144 24.079 1.00 52.59 C
ATOM 10 O3' C B 118 84.991 147.333 25.284 1.00 50.03 O
ATOM 11 C2' C B 118 83.594 145.778 24.005 1.00 52.90 C
ATOM 12 O2' C B 118 82.981 145.392 25.215 1.00 53.89 O
ATOM 13 C1' C B 118 82.477 146.052 22.999 1.00 54.78 C
ATOM 14 N1 C B 118 82.838 145.670 21.617 1.00 56.64 N
ATOM 15 C2 C B 118 83.034 144.306 21.325 1.00 57.66 C
ATOM 16 O2 C B 118 82.886 143.468 22.229 1.00 57.53 O
ATOM 17 N3 C B 118 83.381 143.941 20.066 1.00 57.99 N
ATOM 18 C4 C B 118 83.529 144.869 19.117 1.00 57.07 C
ATOM 19 N4 C B 118 83.880 144.462 17.893 1.00 55.98 N
ATOM 20 C5 C B 118 83.326 146.257 19.383 1.00 56.88 C
ATOM 21 C6 C B 118 82.986 146.610 20.632 1.00 56.08 C
ATOM 22 P A B 119 86.560 147.653 25.226 1.00 47.28 P
ATOM 23 OP1 A B 119 86.686 149.106 25.029 1.00 47.43 O
ATOM 24 OP2 A B 119 87.211 146.727 24.269 1.00 47.72 O
ATOM 25 O5' A B 119 87.078 147.287 26.686 1.00 45.01 O
TER
Atoms:
OP1: (84.521,155.682,19.396)
OP2: (83.272,157.067,21.179)
C3': (84.775,152.909,23.273)
C1': (85.771,153.693,25.261)
C5': (86.066,154.518,21.785)
O4': (86.499,154.229,24.161)
C8: (83.592,154.939,25.703)
O2': (85.678,151.314,24.945)
C6: (84.394,157.609,27.836)
C5: (84.236,156.507,26.981)
C4: (85.373,155.784,26.660)
P: (84.505,156.359,20.725)
C4': (86.115,153.544,22.934)
C2': (84.957,152.505,24.733)
C2: (86.652,157.102,27.878)
N1: (85.639,157.890,28.277)
N3: (86.628,156.033,27.078)
N6: (83.384,158.382,28.235)
N7: (83.119,155.962,26.369)
N9: (84.947,154.761,25.842)
O5': (84.849,155.287,21.847)
O3': (84.273,151.972,22.297)
OP2: (83.272,157.067,21.179)
C3': (84.775,152.909,23.273)
C1': (85.771,153.693,25.261)
C5': (86.066,154.518,21.785)
O4': (86.499,154.229,24.161)
C8: (83.592,154.939,25.703)
O2': (85.678,151.314,24.945)
C6: (84.394,157.609,27.836)
C5: (84.236,156.507,26.981)
C4: (85.373,155.784,26.660)
P: (84.505,156.359,20.725)
C4': (86.115,153.544,22.934)
C2': (84.957,152.505,24.733)
C2: (86.652,157.102,27.878)
N1: (85.639,157.890,28.277)
N3: (86.628,156.033,27.078)
N6: (83.384,158.382,28.235)
N7: (83.119,155.962,26.369)
N9: (84.947,154.761,25.842)
O5': (84.849,155.287,21.847)
O3': (84.273,151.972,22.297)
C2: (83.034,144.306,21.325)
OP1: (86.353,150.573,22.705)
OP2: (85.189,150.611,20.426)
C4: (83.529,144.869,19.117)
O5': (84.132,149.456,22.326)
C3': (84.265,147.144,24.079)
C1': (82.477,146.052,22.999)
O4': (82.192,147.444,23.053)
C5': (83.398,149.486,23.566)
P: (85.101,150.648,21.905)
O2: (82.886,143.468,22.229)
C4': (83.076,148.082,24.012)
C2': (83.594,145.778,24.005)
O2': (82.981,145.392,25.215)
N1: (82.838,145.670,21.617)
N3: (83.381,143.941,20.066)
N4: (83.880,144.462,17.893)
C6: (82.986,146.610,20.632)
C5: (83.326,146.257,19.383)
O3': (84.991,147.333,25.284)
OP1: (86.353,150.573,22.705)
OP2: (85.189,150.611,20.426)
C4: (83.529,144.869,19.117)
O5': (84.132,149.456,22.326)
C3': (84.265,147.144,24.079)
C1': (82.477,146.052,22.999)
O4': (82.192,147.444,23.053)
C5': (83.398,149.486,23.566)
P: (85.101,150.648,21.905)
O2: (82.886,143.468,22.229)
C4': (83.076,148.082,24.012)
C2': (83.594,145.778,24.005)
O2': (82.981,145.392,25.215)
N1: (82.838,145.670,21.617)
N3: (83.381,143.941,20.066)
N4: (83.880,144.462,17.893)
C6: (82.986,146.610,20.632)
C5: (83.326,146.257,19.383)
O3': (84.991,147.333,25.284)
Image (generated by PyMOL):