Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0117:0118
Extra
PDB:
ATOM 1 P A A 117 84.721 156.070 20.738 1.00 85.90 P
ATOM 2 OP1 A A 117 84.736 155.346 19.435 1.00 84.05 O
ATOM 3 OP2 A A 117 83.491 156.802 21.163 1.00 85.56 O
ATOM 4 O5' A A 117 85.065 155.040 21.899 1.00 81.65 O
ATOM 5 C5' A A 117 86.273 154.253 21.853 1.00 73.28 C
ATOM 6 C4' A A 117 86.289 153.269 22.995 1.00 66.98 C
ATOM 7 O4' A A 117 86.674 153.933 24.233 1.00 62.82 O
ATOM 8 C3' A A 117 84.934 152.657 23.315 1.00 64.17 C
ATOM 9 O3' A A 117 84.413 151.745 22.329 1.00 62.51 O
ATOM 10 C2' A A 117 85.093 152.235 24.769 1.00 60.88 C
ATOM 11 O2' A A 117 85.783 151.026 24.984 1.00 58.55 O
ATOM 12 C1' A A 117 85.914 153.408 25.315 1.00 59.21 C
ATOM 13 N9 A A 117 85.078 154.484 25.857 1.00 55.62 N
ATOM 14 C8 A A 117 83.719 154.651 25.706 1.00 54.72 C
ATOM 15 N7 A A 117 83.236 155.686 26.346 1.00 53.21 N
ATOM 16 C5 A A 117 84.348 156.252 26.948 1.00 51.76 C
ATOM 17 C6 A A 117 84.495 157.370 27.778 1.00 50.08 C
ATOM 18 N6 A A 117 83.482 158.146 28.157 1.00 47.90 N
ATOM 19 N1 A A 117 85.736 157.665 28.219 1.00 51.19 N
ATOM 20 C2 A A 117 86.756 156.876 27.842 1.00 53.06 C
ATOM 21 N3 A A 117 86.743 155.793 27.066 1.00 52.97 N
ATOM 22 C4 A A 117 85.493 155.529 26.648 1.00 53.53 C
ATOM 23 P C A 118 85.237 150.434 21.887 1.00 63.81 P
ATOM 24 OP1 C A 118 86.511 150.321 22.652 1.00 64.65 O
ATOM 25 OP2 C A 118 85.284 150.447 20.406 1.00 63.39 O
ATOM 26 O5' C A 118 84.273 149.229 22.290 1.00 63.84 O
TER
ATOM 1 O3' A B 117 84.413 151.745 22.329 1.00 62.51 O
ATOM 2 P C B 118 85.237 150.434 21.887 1.00 63.81 P
ATOM 3 OP1 C B 118 86.511 150.321 22.652 1.00 64.65 O
ATOM 4 OP2 C B 118 85.284 150.447 20.406 1.00 63.39 O
ATOM 5 O5' C B 118 84.273 149.229 22.290 1.00 63.84 O
ATOM 6 C5' C B 118 83.461 149.274 23.485 1.00 59.41 C
ATOM 7 C4' C B 118 83.155 147.873 23.956 1.00 55.89 C
ATOM 8 O4' C B 118 82.277 147.199 23.015 1.00 56.31 O
ATOM 9 C3' C B 118 84.365 146.964 24.032 1.00 53.56 C
ATOM 10 O3' C B 118 85.088 147.196 25.226 1.00 50.60 O
ATOM 11 C2' C B 118 83.731 145.580 23.973 1.00 54.32 C
ATOM 12 O2' C B 118 83.149 145.165 25.189 1.00 54.50 O
ATOM 13 C1' C B 118 82.598 145.814 22.977 1.00 56.64 C
ATOM 14 N1 C B 118 82.956 145.425 21.598 1.00 59.07 N
ATOM 15 C2 C B 118 82.994 144.056 21.275 1.00 60.71 C
ATOM 16 O2 C B 118 82.720 143.218 22.156 1.00 60.29 O
ATOM 17 N3 C B 118 83.327 143.683 20.012 1.00 61.79 N
ATOM 18 C4 C B 118 83.608 144.611 19.092 1.00 60.15 C
ATOM 19 N4 C B 118 83.924 144.196 17.860 1.00 58.68 N
ATOM 20 C5 C B 118 83.575 146.004 19.394 1.00 59.99 C
ATOM 21 C6 C B 118 83.249 146.363 20.646 1.00 58.94 C
ATOM 22 P A B 119 86.670 147.429 25.162 1.00 48.30 P
ATOM 23 OP1 A B 119 86.875 148.862 24.888 1.00 48.57 O
ATOM 24 OP2 A B 119 87.274 146.425 24.262 1.00 49.16 O
ATOM 25 O5' A B 119 87.160 147.094 26.637 1.00 46.03 O
TER
ATOM 2 OP1 A A 117 84.736 155.346 19.435 1.00 84.05 O
ATOM 3 OP2 A A 117 83.491 156.802 21.163 1.00 85.56 O
ATOM 4 O5' A A 117 85.065 155.040 21.899 1.00 81.65 O
ATOM 5 C5' A A 117 86.273 154.253 21.853 1.00 73.28 C
ATOM 6 C4' A A 117 86.289 153.269 22.995 1.00 66.98 C
ATOM 7 O4' A A 117 86.674 153.933 24.233 1.00 62.82 O
ATOM 8 C3' A A 117 84.934 152.657 23.315 1.00 64.17 C
ATOM 9 O3' A A 117 84.413 151.745 22.329 1.00 62.51 O
ATOM 10 C2' A A 117 85.093 152.235 24.769 1.00 60.88 C
ATOM 11 O2' A A 117 85.783 151.026 24.984 1.00 58.55 O
ATOM 12 C1' A A 117 85.914 153.408 25.315 1.00 59.21 C
ATOM 13 N9 A A 117 85.078 154.484 25.857 1.00 55.62 N
ATOM 14 C8 A A 117 83.719 154.651 25.706 1.00 54.72 C
ATOM 15 N7 A A 117 83.236 155.686 26.346 1.00 53.21 N
ATOM 16 C5 A A 117 84.348 156.252 26.948 1.00 51.76 C
ATOM 17 C6 A A 117 84.495 157.370 27.778 1.00 50.08 C
ATOM 18 N6 A A 117 83.482 158.146 28.157 1.00 47.90 N
ATOM 19 N1 A A 117 85.736 157.665 28.219 1.00 51.19 N
ATOM 20 C2 A A 117 86.756 156.876 27.842 1.00 53.06 C
ATOM 21 N3 A A 117 86.743 155.793 27.066 1.00 52.97 N
ATOM 22 C4 A A 117 85.493 155.529 26.648 1.00 53.53 C
ATOM 23 P C A 118 85.237 150.434 21.887 1.00 63.81 P
ATOM 24 OP1 C A 118 86.511 150.321 22.652 1.00 64.65 O
ATOM 25 OP2 C A 118 85.284 150.447 20.406 1.00 63.39 O
ATOM 26 O5' C A 118 84.273 149.229 22.290 1.00 63.84 O
TER
ATOM 1 O3' A B 117 84.413 151.745 22.329 1.00 62.51 O
ATOM 2 P C B 118 85.237 150.434 21.887 1.00 63.81 P
ATOM 3 OP1 C B 118 86.511 150.321 22.652 1.00 64.65 O
ATOM 4 OP2 C B 118 85.284 150.447 20.406 1.00 63.39 O
ATOM 5 O5' C B 118 84.273 149.229 22.290 1.00 63.84 O
ATOM 6 C5' C B 118 83.461 149.274 23.485 1.00 59.41 C
ATOM 7 C4' C B 118 83.155 147.873 23.956 1.00 55.89 C
ATOM 8 O4' C B 118 82.277 147.199 23.015 1.00 56.31 O
ATOM 9 C3' C B 118 84.365 146.964 24.032 1.00 53.56 C
ATOM 10 O3' C B 118 85.088 147.196 25.226 1.00 50.60 O
ATOM 11 C2' C B 118 83.731 145.580 23.973 1.00 54.32 C
ATOM 12 O2' C B 118 83.149 145.165 25.189 1.00 54.50 O
ATOM 13 C1' C B 118 82.598 145.814 22.977 1.00 56.64 C
ATOM 14 N1 C B 118 82.956 145.425 21.598 1.00 59.07 N
ATOM 15 C2 C B 118 82.994 144.056 21.275 1.00 60.71 C
ATOM 16 O2 C B 118 82.720 143.218 22.156 1.00 60.29 O
ATOM 17 N3 C B 118 83.327 143.683 20.012 1.00 61.79 N
ATOM 18 C4 C B 118 83.608 144.611 19.092 1.00 60.15 C
ATOM 19 N4 C B 118 83.924 144.196 17.860 1.00 58.68 N
ATOM 20 C5 C B 118 83.575 146.004 19.394 1.00 59.99 C
ATOM 21 C6 C B 118 83.249 146.363 20.646 1.00 58.94 C
ATOM 22 P A B 119 86.670 147.429 25.162 1.00 48.30 P
ATOM 23 OP1 A B 119 86.875 148.862 24.888 1.00 48.57 O
ATOM 24 OP2 A B 119 87.274 146.425 24.262 1.00 49.16 O
ATOM 25 O5' A B 119 87.160 147.094 26.637 1.00 46.03 O
TER
Atoms:
OP1: (84.736,155.346,19.435)
OP2: (83.491,156.802,21.163)
C3': (84.934,152.657,23.315)
C1': (85.914,153.408,25.315)
C5': (86.273,154.253,21.853)
O4': (86.674,153.933,24.233)
C8: (83.719,154.651,25.706)
O2': (85.783,151.026,24.984)
C6: (84.495,157.370,27.778)
C5: (84.348,156.252,26.948)
C4: (85.493,155.529,26.648)
P: (84.721,156.070,20.738)
C4': (86.289,153.269,22.995)
C2': (85.093,152.235,24.769)
C2: (86.756,156.876,27.842)
N1: (85.736,157.665,28.219)
N3: (86.743,155.793,27.066)
N6: (83.482,158.146,28.157)
N7: (83.236,155.686,26.346)
N9: (85.078,154.484,25.857)
O5': (85.065,155.040,21.899)
O3': (84.413,151.745,22.329)
OP2: (83.491,156.802,21.163)
C3': (84.934,152.657,23.315)
C1': (85.914,153.408,25.315)
C5': (86.273,154.253,21.853)
O4': (86.674,153.933,24.233)
C8: (83.719,154.651,25.706)
O2': (85.783,151.026,24.984)
C6: (84.495,157.370,27.778)
C5: (84.348,156.252,26.948)
C4: (85.493,155.529,26.648)
P: (84.721,156.070,20.738)
C4': (86.289,153.269,22.995)
C2': (85.093,152.235,24.769)
C2: (86.756,156.876,27.842)
N1: (85.736,157.665,28.219)
N3: (86.743,155.793,27.066)
N6: (83.482,158.146,28.157)
N7: (83.236,155.686,26.346)
N9: (85.078,154.484,25.857)
O5': (85.065,155.040,21.899)
O3': (84.413,151.745,22.329)
C2: (82.994,144.056,21.275)
OP1: (86.511,150.321,22.652)
OP2: (85.284,150.447,20.406)
C4: (83.608,144.611,19.092)
O5': (84.273,149.229,22.290)
C3': (84.365,146.964,24.032)
C1': (82.598,145.814,22.977)
O4': (82.277,147.199,23.015)
C5': (83.461,149.274,23.485)
P: (85.237,150.434,21.887)
O2: (82.720,143.218,22.156)
C4': (83.155,147.873,23.956)
C2': (83.731,145.580,23.973)
O2': (83.149,145.165,25.189)
N1: (82.956,145.425,21.598)
N3: (83.327,143.683,20.012)
N4: (83.924,144.196,17.860)
C6: (83.249,146.363,20.646)
C5: (83.575,146.004,19.394)
O3': (85.088,147.196,25.226)
OP1: (86.511,150.321,22.652)
OP2: (85.284,150.447,20.406)
C4: (83.608,144.611,19.092)
O5': (84.273,149.229,22.290)
C3': (84.365,146.964,24.032)
C1': (82.598,145.814,22.977)
O4': (82.277,147.199,23.015)
C5': (83.461,149.274,23.485)
P: (85.237,150.434,21.887)
O2: (82.720,143.218,22.156)
C4': (83.155,147.873,23.956)
C2': (83.731,145.580,23.973)
O2': (83.149,145.165,25.189)
N1: (82.956,145.425,21.598)
N3: (83.327,143.683,20.012)
N4: (83.924,144.196,17.860)
C6: (83.249,146.363,20.646)
C5: (83.575,146.004,19.394)
O3': (85.088,147.196,25.226)
Image (generated by PyMOL):