Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0117:0118
Extra
PDB:
ATOM 1 P A A 117 84.573 156.342 20.741 1.00 91.02 P
ATOM 2 OP1 A A 117 84.663 155.697 19.397 1.00 88.58 O
ATOM 3 OP2 A A 117 83.307 157.019 21.154 1.00 89.88 O
ATOM 4 O5' A A 117 84.893 155.242 21.844 1.00 86.97 O
ATOM 5 C5' A A 117 86.095 154.449 21.766 1.00 79.54 C
ATOM 6 C4' A A 117 86.157 153.487 22.927 1.00 73.82 C
ATOM 7 O4' A A 117 86.573 154.179 24.140 1.00 70.55 O
ATOM 8 C3' A A 117 84.830 152.853 23.309 1.00 70.81 C
ATOM 9 O3' A A 117 84.287 151.922 22.351 1.00 69.01 O
ATOM 10 C2' A A 117 85.063 152.450 24.762 1.00 68.40 C
ATOM 11 O2' A A 117 85.819 151.278 24.964 1.00 67.10 O
ATOM 12 C1' A A 117 85.875 153.648 25.260 1.00 66.75 C
ATOM 13 N9 A A 117 85.050 154.713 25.836 1.00 62.78 N
ATOM 14 C8 A A 117 83.691 154.887 25.720 1.00 61.73 C
ATOM 15 N7 A A 117 83.228 155.918 26.384 1.00 61.24 N
ATOM 16 C5 A A 117 84.356 156.470 26.970 1.00 59.55 C
ATOM 17 C6 A A 117 84.531 157.579 27.815 1.00 57.71 C
ATOM 18 N6 A A 117 83.535 158.357 28.233 1.00 55.27 N
ATOM 19 N1 A A 117 85.783 157.861 28.226 1.00 58.97 N
ATOM 20 C2 A A 117 86.789 157.071 27.810 1.00 61.40 C
ATOM 21 N3 A A 117 86.750 155.996 27.019 1.00 60.85 N
ATOM 22 C4 A A 117 85.488 155.745 26.632 1.00 61.13 C
ATOM 23 P C A 118 85.115 150.620 21.883 1.00 69.06 P
ATOM 24 OP1 C A 118 86.382 150.494 22.660 1.00 69.94 O
ATOM 25 OP2 C A 118 85.182 150.670 20.403 1.00 69.25 O
ATOM 26 O5' C A 118 84.145 149.404 22.238 1.00 67.84 O
TER
ATOM 1 O3' A B 117 84.287 151.922 22.351 1.00 69.01 O
ATOM 2 P C B 118 85.115 150.620 21.883 1.00 69.06 P
ATOM 3 OP1 C B 118 86.382 150.494 22.660 1.00 69.94 O
ATOM 4 OP2 C B 118 85.182 150.670 20.403 1.00 69.25 O
ATOM 5 O5' C B 118 84.145 149.404 22.238 1.00 67.84 O
ATOM 6 C5' C B 118 83.364 149.393 23.451 1.00 63.76 C
ATOM 7 C4' C B 118 83.099 147.974 23.886 1.00 60.14 C
ATOM 8 O4' C B 118 82.270 147.305 22.902 1.00 61.25 O
ATOM 9 C3' C B 118 84.325 147.087 23.965 1.00 58.40 C
ATOM 10 O3' C B 118 85.044 147.303 25.167 1.00 53.93 O
ATOM 11 C2' C B 118 83.716 145.694 23.885 1.00 60.20 C
ATOM 12 O2' C B 118 83.130 145.265 25.092 1.00 60.69 O
ATOM 13 C1' C B 118 82.590 145.920 22.879 1.00 62.29 C
ATOM 14 N1 C B 118 82.948 145.515 21.506 1.00 64.72 N
ATOM 15 C2 C B 118 82.991 144.140 21.203 1.00 66.70 C
ATOM 16 O2 C B 118 82.717 143.315 22.097 1.00 66.36 O
ATOM 17 N3 C B 118 83.328 143.748 19.945 1.00 67.55 N
ATOM 18 C4 C B 118 83.607 144.664 19.011 1.00 66.63 C
ATOM 19 N4 C B 118 83.932 144.234 17.785 1.00 64.38 N
ATOM 20 C5 C B 118 83.566 146.064 19.292 1.00 66.46 C
ATOM 21 C6 C B 118 83.237 146.441 20.540 1.00 65.24 C
ATOM 22 P A B 119 86.614 147.606 25.103 1.00 49.74 P
ATOM 23 OP1 A B 119 86.751 149.053 24.880 1.00 50.24 O
ATOM 24 OP2 A B 119 87.257 146.662 24.171 1.00 50.31 O
ATOM 25 O5' A B 119 87.132 147.249 26.561 1.00 48.57 O
TER
ATOM 2 OP1 A A 117 84.663 155.697 19.397 1.00 88.58 O
ATOM 3 OP2 A A 117 83.307 157.019 21.154 1.00 89.88 O
ATOM 4 O5' A A 117 84.893 155.242 21.844 1.00 86.97 O
ATOM 5 C5' A A 117 86.095 154.449 21.766 1.00 79.54 C
ATOM 6 C4' A A 117 86.157 153.487 22.927 1.00 73.82 C
ATOM 7 O4' A A 117 86.573 154.179 24.140 1.00 70.55 O
ATOM 8 C3' A A 117 84.830 152.853 23.309 1.00 70.81 C
ATOM 9 O3' A A 117 84.287 151.922 22.351 1.00 69.01 O
ATOM 10 C2' A A 117 85.063 152.450 24.762 1.00 68.40 C
ATOM 11 O2' A A 117 85.819 151.278 24.964 1.00 67.10 O
ATOM 12 C1' A A 117 85.875 153.648 25.260 1.00 66.75 C
ATOM 13 N9 A A 117 85.050 154.713 25.836 1.00 62.78 N
ATOM 14 C8 A A 117 83.691 154.887 25.720 1.00 61.73 C
ATOM 15 N7 A A 117 83.228 155.918 26.384 1.00 61.24 N
ATOM 16 C5 A A 117 84.356 156.470 26.970 1.00 59.55 C
ATOM 17 C6 A A 117 84.531 157.579 27.815 1.00 57.71 C
ATOM 18 N6 A A 117 83.535 158.357 28.233 1.00 55.27 N
ATOM 19 N1 A A 117 85.783 157.861 28.226 1.00 58.97 N
ATOM 20 C2 A A 117 86.789 157.071 27.810 1.00 61.40 C
ATOM 21 N3 A A 117 86.750 155.996 27.019 1.00 60.85 N
ATOM 22 C4 A A 117 85.488 155.745 26.632 1.00 61.13 C
ATOM 23 P C A 118 85.115 150.620 21.883 1.00 69.06 P
ATOM 24 OP1 C A 118 86.382 150.494 22.660 1.00 69.94 O
ATOM 25 OP2 C A 118 85.182 150.670 20.403 1.00 69.25 O
ATOM 26 O5' C A 118 84.145 149.404 22.238 1.00 67.84 O
TER
ATOM 1 O3' A B 117 84.287 151.922 22.351 1.00 69.01 O
ATOM 2 P C B 118 85.115 150.620 21.883 1.00 69.06 P
ATOM 3 OP1 C B 118 86.382 150.494 22.660 1.00 69.94 O
ATOM 4 OP2 C B 118 85.182 150.670 20.403 1.00 69.25 O
ATOM 5 O5' C B 118 84.145 149.404 22.238 1.00 67.84 O
ATOM 6 C5' C B 118 83.364 149.393 23.451 1.00 63.76 C
ATOM 7 C4' C B 118 83.099 147.974 23.886 1.00 60.14 C
ATOM 8 O4' C B 118 82.270 147.305 22.902 1.00 61.25 O
ATOM 9 C3' C B 118 84.325 147.087 23.965 1.00 58.40 C
ATOM 10 O3' C B 118 85.044 147.303 25.167 1.00 53.93 O
ATOM 11 C2' C B 118 83.716 145.694 23.885 1.00 60.20 C
ATOM 12 O2' C B 118 83.130 145.265 25.092 1.00 60.69 O
ATOM 13 C1' C B 118 82.590 145.920 22.879 1.00 62.29 C
ATOM 14 N1 C B 118 82.948 145.515 21.506 1.00 64.72 N
ATOM 15 C2 C B 118 82.991 144.140 21.203 1.00 66.70 C
ATOM 16 O2 C B 118 82.717 143.315 22.097 1.00 66.36 O
ATOM 17 N3 C B 118 83.328 143.748 19.945 1.00 67.55 N
ATOM 18 C4 C B 118 83.607 144.664 19.011 1.00 66.63 C
ATOM 19 N4 C B 118 83.932 144.234 17.785 1.00 64.38 N
ATOM 20 C5 C B 118 83.566 146.064 19.292 1.00 66.46 C
ATOM 21 C6 C B 118 83.237 146.441 20.540 1.00 65.24 C
ATOM 22 P A B 119 86.614 147.606 25.103 1.00 49.74 P
ATOM 23 OP1 A B 119 86.751 149.053 24.880 1.00 50.24 O
ATOM 24 OP2 A B 119 87.257 146.662 24.171 1.00 50.31 O
ATOM 25 O5' A B 119 87.132 147.249 26.561 1.00 48.57 O
TER
Atoms:
OP1: (84.663,155.697,19.397)
OP2: (83.307,157.019,21.154)
C3': (84.830,152.853,23.309)
C1': (85.875,153.648,25.260)
C5': (86.095,154.449,21.766)
O4': (86.573,154.179,24.140)
C8: (83.691,154.887,25.720)
O2': (85.819,151.278,24.964)
C6: (84.531,157.579,27.815)
C5: (84.356,156.470,26.970)
C4: (85.488,155.745,26.632)
P: (84.573,156.342,20.741)
C4': (86.157,153.487,22.927)
C2': (85.063,152.450,24.762)
C2: (86.789,157.071,27.810)
N1: (85.783,157.861,28.226)
N3: (86.750,155.996,27.019)
N6: (83.535,158.357,28.233)
N7: (83.228,155.918,26.384)
N9: (85.050,154.713,25.836)
O5': (84.893,155.242,21.844)
O3': (84.287,151.922,22.351)
OP2: (83.307,157.019,21.154)
C3': (84.830,152.853,23.309)
C1': (85.875,153.648,25.260)
C5': (86.095,154.449,21.766)
O4': (86.573,154.179,24.140)
C8: (83.691,154.887,25.720)
O2': (85.819,151.278,24.964)
C6: (84.531,157.579,27.815)
C5: (84.356,156.470,26.970)
C4: (85.488,155.745,26.632)
P: (84.573,156.342,20.741)
C4': (86.157,153.487,22.927)
C2': (85.063,152.450,24.762)
C2: (86.789,157.071,27.810)
N1: (85.783,157.861,28.226)
N3: (86.750,155.996,27.019)
N6: (83.535,158.357,28.233)
N7: (83.228,155.918,26.384)
N9: (85.050,154.713,25.836)
O5': (84.893,155.242,21.844)
O3': (84.287,151.922,22.351)
C2: (82.991,144.140,21.203)
OP1: (86.382,150.494,22.660)
OP2: (85.182,150.670,20.403)
C4: (83.607,144.664,19.011)
O5': (84.145,149.404,22.238)
C3': (84.325,147.087,23.965)
C1': (82.590,145.920,22.879)
O4': (82.270,147.305,22.902)
C5': (83.364,149.393,23.451)
P: (85.115,150.620,21.883)
O2: (82.717,143.315,22.097)
C4': (83.099,147.974,23.886)
C2': (83.716,145.694,23.885)
O2': (83.130,145.265,25.092)
N1: (82.948,145.515,21.506)
N3: (83.328,143.748,19.945)
N4: (83.932,144.234,17.785)
C6: (83.237,146.441,20.540)
C5: (83.566,146.064,19.292)
O3': (85.044,147.303,25.167)
OP1: (86.382,150.494,22.660)
OP2: (85.182,150.670,20.403)
C4: (83.607,144.664,19.011)
O5': (84.145,149.404,22.238)
C3': (84.325,147.087,23.965)
C1': (82.590,145.920,22.879)
O4': (82.270,147.305,22.902)
C5': (83.364,149.393,23.451)
P: (85.115,150.620,21.883)
O2: (82.717,143.315,22.097)
C4': (83.099,147.974,23.886)
C2': (83.716,145.694,23.885)
O2': (83.130,145.265,25.092)
N1: (82.948,145.515,21.506)
N3: (83.328,143.748,19.945)
N4: (83.932,144.234,17.785)
C6: (83.237,146.441,20.540)
C5: (83.566,146.064,19.292)
O3': (85.044,147.303,25.167)
Image (generated by PyMOL):