Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:0117:0118
Extra
PDB:
ATOM 1 P A A 117 84.567 156.039 20.583 1.00 77.22 P
ATOM 2 OP1 A A 117 84.851 155.325 19.302 1.00 75.44 O
ATOM 3 OP2 A A 117 83.198 156.570 20.847 1.00 77.45 O
ATOM 4 O5' A A 117 84.922 155.076 21.796 1.00 72.67 O
ATOM 5 C5' A A 117 86.116 154.279 21.778 1.00 64.52 C
ATOM 6 C4' A A 117 86.125 153.342 22.957 1.00 58.39 C
ATOM 7 O4' A A 117 86.431 154.071 24.180 1.00 54.49 O
ATOM 8 C3' A A 117 84.787 152.690 23.256 1.00 56.34 C
ATOM 9 O3' A A 117 84.335 151.732 22.279 1.00 55.63 O
ATOM 10 C2' A A 117 84.926 152.310 24.726 1.00 53.90 C
ATOM 11 O2' A A 117 85.675 151.144 24.988 1.00 54.04 O
ATOM 12 C1' A A 117 85.686 153.527 25.262 1.00 51.35 C
ATOM 13 N9 A A 117 84.806 154.570 25.805 1.00 46.75 N
ATOM 14 C8 A A 117 83.444 154.693 25.650 1.00 45.22 C
ATOM 15 N7 A A 117 82.921 155.694 26.316 1.00 42.67 N
ATOM 16 C5 A A 117 84.009 156.283 26.938 1.00 41.48 C
ATOM 17 C6 A A 117 84.115 157.379 27.809 1.00 40.06 C
ATOM 18 N6 A A 117 83.073 158.096 28.228 1.00 37.83 N
ATOM 19 N1 A A 117 85.343 157.709 28.251 1.00 40.32 N
ATOM 20 C2 A A 117 86.391 156.974 27.844 1.00 42.27 C
ATOM 21 N3 A A 117 86.419 155.916 27.036 1.00 41.99 N
ATOM 22 C4 A A 117 85.181 155.615 26.615 1.00 43.50 C
ATOM 23 P C A 118 85.201 150.421 21.928 1.00 55.77 P
ATOM 24 OP1 C A 118 86.424 150.355 22.768 1.00 57.53 O
ATOM 25 OP2 C A 118 85.338 150.399 20.452 1.00 56.38 O
ATOM 26 O5' C A 118 84.238 149.205 22.309 1.00 56.63 O
TER
ATOM 1 O3' A B 117 84.335 151.732 22.279 1.00 55.63 O
ATOM 2 P C B 118 85.201 150.421 21.928 1.00 55.77 P
ATOM 3 OP1 C B 118 86.424 150.355 22.768 1.00 57.53 O
ATOM 4 OP2 C B 118 85.338 150.399 20.452 1.00 56.38 O
ATOM 5 O5' C B 118 84.238 149.205 22.309 1.00 56.63 O
ATOM 6 C5' C B 118 83.330 149.274 23.435 1.00 52.50 C
ATOM 7 C4' C B 118 82.964 147.881 23.900 1.00 49.93 C
ATOM 8 O4' C B 118 82.076 147.217 22.959 1.00 50.59 O
ATOM 9 C3' C B 118 84.135 146.932 24.001 1.00 47.67 C
ATOM 10 O3' C B 118 84.847 147.171 25.187 1.00 44.80 O
ATOM 11 C2' C B 118 83.451 145.575 23.983 1.00 48.20 C
ATOM 12 O2' C B 118 82.848 145.260 25.217 1.00 47.33 O
ATOM 13 C1' C B 118 82.345 145.818 22.957 1.00 50.81 C
ATOM 14 N1 C B 118 82.718 145.390 21.590 1.00 53.81 N
ATOM 15 C2 C B 118 82.861 144.008 21.319 1.00 54.71 C
ATOM 16 O2 C B 118 82.653 143.182 22.229 1.00 53.57 O
ATOM 17 N3 C B 118 83.217 143.614 20.070 1.00 55.62 N
ATOM 18 C4 C B 118 83.418 144.527 19.111 1.00 55.16 C
ATOM 19 N4 C B 118 83.763 144.092 17.893 1.00 54.03 N
ATOM 20 C5 C B 118 83.274 145.925 19.356 1.00 55.07 C
ATOM 21 C6 C B 118 82.928 146.308 20.596 1.00 54.37 C
ATOM 22 P A B 119 86.418 147.426 25.119 1.00 41.51 P
ATOM 23 OP1 A B 119 86.606 148.861 24.856 1.00 41.28 O
ATOM 24 OP2 A B 119 87.024 146.437 24.207 1.00 41.84 O
ATOM 25 O5' A B 119 86.896 147.078 26.595 1.00 39.08 O
TER
ATOM 2 OP1 A A 117 84.851 155.325 19.302 1.00 75.44 O
ATOM 3 OP2 A A 117 83.198 156.570 20.847 1.00 77.45 O
ATOM 4 O5' A A 117 84.922 155.076 21.796 1.00 72.67 O
ATOM 5 C5' A A 117 86.116 154.279 21.778 1.00 64.52 C
ATOM 6 C4' A A 117 86.125 153.342 22.957 1.00 58.39 C
ATOM 7 O4' A A 117 86.431 154.071 24.180 1.00 54.49 O
ATOM 8 C3' A A 117 84.787 152.690 23.256 1.00 56.34 C
ATOM 9 O3' A A 117 84.335 151.732 22.279 1.00 55.63 O
ATOM 10 C2' A A 117 84.926 152.310 24.726 1.00 53.90 C
ATOM 11 O2' A A 117 85.675 151.144 24.988 1.00 54.04 O
ATOM 12 C1' A A 117 85.686 153.527 25.262 1.00 51.35 C
ATOM 13 N9 A A 117 84.806 154.570 25.805 1.00 46.75 N
ATOM 14 C8 A A 117 83.444 154.693 25.650 1.00 45.22 C
ATOM 15 N7 A A 117 82.921 155.694 26.316 1.00 42.67 N
ATOM 16 C5 A A 117 84.009 156.283 26.938 1.00 41.48 C
ATOM 17 C6 A A 117 84.115 157.379 27.809 1.00 40.06 C
ATOM 18 N6 A A 117 83.073 158.096 28.228 1.00 37.83 N
ATOM 19 N1 A A 117 85.343 157.709 28.251 1.00 40.32 N
ATOM 20 C2 A A 117 86.391 156.974 27.844 1.00 42.27 C
ATOM 21 N3 A A 117 86.419 155.916 27.036 1.00 41.99 N
ATOM 22 C4 A A 117 85.181 155.615 26.615 1.00 43.50 C
ATOM 23 P C A 118 85.201 150.421 21.928 1.00 55.77 P
ATOM 24 OP1 C A 118 86.424 150.355 22.768 1.00 57.53 O
ATOM 25 OP2 C A 118 85.338 150.399 20.452 1.00 56.38 O
ATOM 26 O5' C A 118 84.238 149.205 22.309 1.00 56.63 O
TER
ATOM 1 O3' A B 117 84.335 151.732 22.279 1.00 55.63 O
ATOM 2 P C B 118 85.201 150.421 21.928 1.00 55.77 P
ATOM 3 OP1 C B 118 86.424 150.355 22.768 1.00 57.53 O
ATOM 4 OP2 C B 118 85.338 150.399 20.452 1.00 56.38 O
ATOM 5 O5' C B 118 84.238 149.205 22.309 1.00 56.63 O
ATOM 6 C5' C B 118 83.330 149.274 23.435 1.00 52.50 C
ATOM 7 C4' C B 118 82.964 147.881 23.900 1.00 49.93 C
ATOM 8 O4' C B 118 82.076 147.217 22.959 1.00 50.59 O
ATOM 9 C3' C B 118 84.135 146.932 24.001 1.00 47.67 C
ATOM 10 O3' C B 118 84.847 147.171 25.187 1.00 44.80 O
ATOM 11 C2' C B 118 83.451 145.575 23.983 1.00 48.20 C
ATOM 12 O2' C B 118 82.848 145.260 25.217 1.00 47.33 O
ATOM 13 C1' C B 118 82.345 145.818 22.957 1.00 50.81 C
ATOM 14 N1 C B 118 82.718 145.390 21.590 1.00 53.81 N
ATOM 15 C2 C B 118 82.861 144.008 21.319 1.00 54.71 C
ATOM 16 O2 C B 118 82.653 143.182 22.229 1.00 53.57 O
ATOM 17 N3 C B 118 83.217 143.614 20.070 1.00 55.62 N
ATOM 18 C4 C B 118 83.418 144.527 19.111 1.00 55.16 C
ATOM 19 N4 C B 118 83.763 144.092 17.893 1.00 54.03 N
ATOM 20 C5 C B 118 83.274 145.925 19.356 1.00 55.07 C
ATOM 21 C6 C B 118 82.928 146.308 20.596 1.00 54.37 C
ATOM 22 P A B 119 86.418 147.426 25.119 1.00 41.51 P
ATOM 23 OP1 A B 119 86.606 148.861 24.856 1.00 41.28 O
ATOM 24 OP2 A B 119 87.024 146.437 24.207 1.00 41.84 O
ATOM 25 O5' A B 119 86.896 147.078 26.595 1.00 39.08 O
TER
Atoms:
OP1: (84.851,155.325,19.302)
OP2: (83.198,156.570,20.847)
C3': (84.787,152.690,23.256)
C1': (85.686,153.527,25.262)
C5': (86.116,154.279,21.778)
O4': (86.431,154.071,24.180)
C8: (83.444,154.693,25.650)
O2': (85.675,151.144,24.988)
C6: (84.115,157.379,27.809)
C5: (84.009,156.283,26.938)
C4: (85.181,155.615,26.615)
P: (84.567,156.039,20.583)
C4': (86.125,153.342,22.957)
C2': (84.926,152.310,24.726)
C2: (86.391,156.974,27.844)
N1: (85.343,157.709,28.251)
N3: (86.419,155.916,27.036)
N6: (83.073,158.096,28.228)
N7: (82.921,155.694,26.316)
N9: (84.806,154.570,25.805)
O5': (84.922,155.076,21.796)
O3': (84.335,151.732,22.279)
OP2: (83.198,156.570,20.847)
C3': (84.787,152.690,23.256)
C1': (85.686,153.527,25.262)
C5': (86.116,154.279,21.778)
O4': (86.431,154.071,24.180)
C8: (83.444,154.693,25.650)
O2': (85.675,151.144,24.988)
C6: (84.115,157.379,27.809)
C5: (84.009,156.283,26.938)
C4: (85.181,155.615,26.615)
P: (84.567,156.039,20.583)
C4': (86.125,153.342,22.957)
C2': (84.926,152.310,24.726)
C2: (86.391,156.974,27.844)
N1: (85.343,157.709,28.251)
N3: (86.419,155.916,27.036)
N6: (83.073,158.096,28.228)
N7: (82.921,155.694,26.316)
N9: (84.806,154.570,25.805)
O5': (84.922,155.076,21.796)
O3': (84.335,151.732,22.279)
C2: (82.861,144.008,21.319)
OP1: (86.424,150.355,22.768)
OP2: (85.338,150.399,20.452)
C4: (83.418,144.527,19.111)
O5': (84.238,149.205,22.309)
C3': (84.135,146.932,24.001)
C1': (82.345,145.818,22.957)
O4': (82.076,147.217,22.959)
C5': (83.330,149.274,23.435)
P: (85.201,150.421,21.928)
O2: (82.653,143.182,22.229)
C4': (82.964,147.881,23.900)
C2': (83.451,145.575,23.983)
O2': (82.848,145.260,25.217)
N1: (82.718,145.390,21.590)
N3: (83.217,143.614,20.070)
N4: (83.763,144.092,17.893)
C6: (82.928,146.308,20.596)
C5: (83.274,145.925,19.356)
O3': (84.847,147.171,25.187)
OP1: (86.424,150.355,22.768)
OP2: (85.338,150.399,20.452)
C4: (83.418,144.527,19.111)
O5': (84.238,149.205,22.309)
C3': (84.135,146.932,24.001)
C1': (82.345,145.818,22.957)
O4': (82.076,147.217,22.959)
C5': (83.330,149.274,23.435)
P: (85.201,150.421,21.928)
O2: (82.653,143.182,22.229)
C4': (82.964,147.881,23.900)
C2': (83.451,145.575,23.983)
O2': (82.848,145.260,25.217)
N1: (82.718,145.390,21.590)
N3: (83.217,143.614,20.070)
N4: (83.763,144.092,17.893)
C6: (82.928,146.308,20.596)
C5: (83.274,145.925,19.356)
O3': (84.847,147.171,25.187)
Image (generated by PyMOL):