Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:A1089:A1092
Extra
PDB:
ATOM 1 O3' U A1088 -110.720 63.445 5.974 1.00 32.49 O
ATOM 2 P U A1089 -111.405 62.063 6.379 1.00 28.55 P
ATOM 3 OP1 U A1089 -112.138 62.292 7.654 1.00 28.55 O
ATOM 4 OP2 U A1089 -110.335 61.021 6.331 1.00 28.55 O
ATOM 5 O5' U A1089 -112.440 61.839 5.199 1.00 28.55 O
ATOM 6 C5' U A1089 -113.498 62.751 5.000 1.00 28.55 C
ATOM 7 C4' U A1089 -114.205 62.489 3.705 1.00 28.55 C
ATOM 8 O4' U A1089 -113.262 62.487 2.615 1.00 28.55 O
ATOM 9 C3' U A1089 -114.894 61.151 3.602 1.00 28.55 C
ATOM 10 O3' U A1089 -116.153 61.156 4.236 1.00 28.55 O
ATOM 11 C2' U A1089 -114.983 60.928 2.105 1.00 28.55 C
ATOM 12 O2' U A1089 -116.127 61.576 1.572 1.00 28.55 O
ATOM 13 C1' U A1089 -113.716 61.630 1.599 1.00 28.55 C
ATOM 14 N1 U A1089 -112.642 60.680 1.278 1.00 28.70 N
ATOM 15 C2 U A1089 -112.636 60.148 0.001 1.00 28.70 C
ATOM 16 O2 U A1089 -113.463 60.386 -0.865 1.00 28.70 O
ATOM 17 N3 U A1089 -111.619 59.284 -0.252 1.00 28.70 N
ATOM 18 C4 U A1089 -110.626 58.902 0.607 1.00 28.70 C
ATOM 19 O4 U A1089 -109.789 58.089 0.192 1.00 28.70 O
ATOM 20 C5 U A1089 -110.697 59.507 1.909 1.00 28.70 C
ATOM 21 C6 U A1089 -111.681 60.359 2.197 1.00 28.70 C
ATOM 22 P A A1090 -116.689 59.841 4.964 1.00 44.88 P
ATOM 23 OP1 A A1090 -118.116 60.099 5.311 1.00 44.88 O
ATOM 24 OP2 A A1090 -115.725 59.516 6.053 1.00 44.88 O
ATOM 25 O5' A A1090 -116.589 58.747 3.809 1.00 44.88 O
TER
ATOM 1 O3' A B1091 -112.721 56.708 -4.352 1.00 14.07 O
ATOM 2 P G B1092 -111.195 56.762 -3.803 1.00 26.03 P
ATOM 3 OP1 G B1092 -110.623 55.408 -3.973 1.00 26.03 O
ATOM 4 OP2 G B1092 -111.228 57.345 -2.438 1.00 26.03 O
ATOM 5 O5' G B1092 -110.497 57.777 -4.816 1.00 26.03 O
ATOM 6 C5' G B1092 -110.422 57.474 -6.197 1.00 26.03 C
ATOM 7 C4' G B1092 -110.828 58.637 -7.051 1.00 26.03 C
ATOM 8 O4' G B1092 -109.927 58.709 -8.178 1.00 26.03 O
ATOM 9 C3' G B1092 -112.230 58.543 -7.652 1.00 26.03 C
ATOM 10 O3' G B1092 -112.771 59.846 -7.852 1.00 26.03 O
ATOM 11 C2' G B1092 -111.960 57.942 -9.001 1.00 26.03 C
ATOM 12 O2' G B1092 -112.971 58.178 -9.952 1.00 26.03 O
ATOM 13 C1' G B1092 -110.671 58.649 -9.368 1.00 26.03 C
ATOM 14 N9 G B1092 -109.901 57.942 -10.366 1.00 26.57 N
ATOM 15 C8 G B1092 -109.663 56.594 -10.367 1.00 26.57 C
ATOM 16 N7 G B1092 -109.009 56.198 -11.409 1.00 26.57 N
ATOM 17 C5 G B1092 -108.822 57.359 -12.128 1.00 26.57 C
ATOM 18 C6 G B1092 -108.165 57.514 -13.357 1.00 26.57 C
ATOM 19 O6 G B1092 -107.619 56.612 -14.009 1.00 26.57 O
ATOM 20 N1 G B1092 -108.206 58.862 -13.765 1.00 26.57 N
ATOM 21 C2 G B1092 -108.793 59.923 -13.070 1.00 26.57 C
ATOM 22 N2 G B1092 -108.700 61.146 -13.658 1.00 26.57 N
ATOM 23 N3 G B1092 -109.422 59.771 -11.894 1.00 26.57 N
ATOM 24 C4 G B1092 -109.387 58.464 -11.509 1.00 26.57 C
ATOM 25 P U B1093 -114.369 60.057 -7.891 1.00 21.85 P
ATOM 26 OP1 U B1093 -114.993 58.786 -7.465 1.00 21.85 O
ATOM 27 OP2 U B1093 -114.724 60.599 -9.209 1.00 21.85 O
ATOM 28 O5' U B1093 -114.567 61.163 -6.761 1.00 21.85 O
TER
ATOM 2 P U A1089 -111.405 62.063 6.379 1.00 28.55 P
ATOM 3 OP1 U A1089 -112.138 62.292 7.654 1.00 28.55 O
ATOM 4 OP2 U A1089 -110.335 61.021 6.331 1.00 28.55 O
ATOM 5 O5' U A1089 -112.440 61.839 5.199 1.00 28.55 O
ATOM 6 C5' U A1089 -113.498 62.751 5.000 1.00 28.55 C
ATOM 7 C4' U A1089 -114.205 62.489 3.705 1.00 28.55 C
ATOM 8 O4' U A1089 -113.262 62.487 2.615 1.00 28.55 O
ATOM 9 C3' U A1089 -114.894 61.151 3.602 1.00 28.55 C
ATOM 10 O3' U A1089 -116.153 61.156 4.236 1.00 28.55 O
ATOM 11 C2' U A1089 -114.983 60.928 2.105 1.00 28.55 C
ATOM 12 O2' U A1089 -116.127 61.576 1.572 1.00 28.55 O
ATOM 13 C1' U A1089 -113.716 61.630 1.599 1.00 28.55 C
ATOM 14 N1 U A1089 -112.642 60.680 1.278 1.00 28.70 N
ATOM 15 C2 U A1089 -112.636 60.148 0.001 1.00 28.70 C
ATOM 16 O2 U A1089 -113.463 60.386 -0.865 1.00 28.70 O
ATOM 17 N3 U A1089 -111.619 59.284 -0.252 1.00 28.70 N
ATOM 18 C4 U A1089 -110.626 58.902 0.607 1.00 28.70 C
ATOM 19 O4 U A1089 -109.789 58.089 0.192 1.00 28.70 O
ATOM 20 C5 U A1089 -110.697 59.507 1.909 1.00 28.70 C
ATOM 21 C6 U A1089 -111.681 60.359 2.197 1.00 28.70 C
ATOM 22 P A A1090 -116.689 59.841 4.964 1.00 44.88 P
ATOM 23 OP1 A A1090 -118.116 60.099 5.311 1.00 44.88 O
ATOM 24 OP2 A A1090 -115.725 59.516 6.053 1.00 44.88 O
ATOM 25 O5' A A1090 -116.589 58.747 3.809 1.00 44.88 O
TER
ATOM 1 O3' A B1091 -112.721 56.708 -4.352 1.00 14.07 O
ATOM 2 P G B1092 -111.195 56.762 -3.803 1.00 26.03 P
ATOM 3 OP1 G B1092 -110.623 55.408 -3.973 1.00 26.03 O
ATOM 4 OP2 G B1092 -111.228 57.345 -2.438 1.00 26.03 O
ATOM 5 O5' G B1092 -110.497 57.777 -4.816 1.00 26.03 O
ATOM 6 C5' G B1092 -110.422 57.474 -6.197 1.00 26.03 C
ATOM 7 C4' G B1092 -110.828 58.637 -7.051 1.00 26.03 C
ATOM 8 O4' G B1092 -109.927 58.709 -8.178 1.00 26.03 O
ATOM 9 C3' G B1092 -112.230 58.543 -7.652 1.00 26.03 C
ATOM 10 O3' G B1092 -112.771 59.846 -7.852 1.00 26.03 O
ATOM 11 C2' G B1092 -111.960 57.942 -9.001 1.00 26.03 C
ATOM 12 O2' G B1092 -112.971 58.178 -9.952 1.00 26.03 O
ATOM 13 C1' G B1092 -110.671 58.649 -9.368 1.00 26.03 C
ATOM 14 N9 G B1092 -109.901 57.942 -10.366 1.00 26.57 N
ATOM 15 C8 G B1092 -109.663 56.594 -10.367 1.00 26.57 C
ATOM 16 N7 G B1092 -109.009 56.198 -11.409 1.00 26.57 N
ATOM 17 C5 G B1092 -108.822 57.359 -12.128 1.00 26.57 C
ATOM 18 C6 G B1092 -108.165 57.514 -13.357 1.00 26.57 C
ATOM 19 O6 G B1092 -107.619 56.612 -14.009 1.00 26.57 O
ATOM 20 N1 G B1092 -108.206 58.862 -13.765 1.00 26.57 N
ATOM 21 C2 G B1092 -108.793 59.923 -13.070 1.00 26.57 C
ATOM 22 N2 G B1092 -108.700 61.146 -13.658 1.00 26.57 N
ATOM 23 N3 G B1092 -109.422 59.771 -11.894 1.00 26.57 N
ATOM 24 C4 G B1092 -109.387 58.464 -11.509 1.00 26.57 C
ATOM 25 P U B1093 -114.369 60.057 -7.891 1.00 21.85 P
ATOM 26 OP1 U B1093 -114.993 58.786 -7.465 1.00 21.85 O
ATOM 27 OP2 U B1093 -114.724 60.599 -9.209 1.00 21.85 O
ATOM 28 O5' U B1093 -114.567 61.163 -6.761 1.00 21.85 O
TER
Atoms:
C4: (-110.626,58.902,0.607)
N3: (-111.619,59.284,-0.252)
OP1: (-112.138,62.292,7.654)
OP2: (-110.335,61.021,6.331)
C2: (-112.636,60.148,0.001)
C1': (-113.716,61.630,1.599)
C3': (-114.894,61.151,3.602)
O5': (-112.440,61.839,5.199)
O4': (-113.262,62.487,2.615)
C5': (-113.498,62.751,5.000)
P: (-111.405,62.063,6.379)
C4': (-114.205,62.489,3.705)
C2': (-114.983,60.928,2.105)
O2': (-116.127,61.576,1.572)
N1: (-112.642,60.680,1.278)
O4: (-109.789,58.089,0.192)
O2: (-113.463,60.386,-0.865)
C6: (-111.681,60.359,2.197)
C5: (-110.697,59.507,1.909)
O3': (-116.153,61.156,4.236)
N3: (-111.619,59.284,-0.252)
OP1: (-112.138,62.292,7.654)
OP2: (-110.335,61.021,6.331)
C2: (-112.636,60.148,0.001)
C1': (-113.716,61.630,1.599)
C3': (-114.894,61.151,3.602)
O5': (-112.440,61.839,5.199)
O4': (-113.262,62.487,2.615)
C5': (-113.498,62.751,5.000)
P: (-111.405,62.063,6.379)
C4': (-114.205,62.489,3.705)
C2': (-114.983,60.928,2.105)
O2': (-116.127,61.576,1.572)
N1: (-112.642,60.680,1.278)
O4: (-109.789,58.089,0.192)
O2: (-113.463,60.386,-0.865)
C6: (-111.681,60.359,2.197)
C5: (-110.697,59.507,1.909)
O3': (-116.153,61.156,4.236)
OP1: (-110.623,55.408,-3.973)
OP2: (-111.228,57.345,-2.438)
C3': (-112.230,58.543,-7.652)
C1': (-110.671,58.649,-9.368)
C5': (-110.422,57.474,-6.197)
O6: (-107.619,56.612,-14.009)
O4': (-109.927,58.709,-8.178)
C8: (-109.663,56.594,-10.367)
C2: (-108.793,59.923,-13.070)
C6: (-108.165,57.514,-13.357)
C5: (-108.822,57.359,-12.128)
C4: (-109.387,58.464,-11.509)
P: (-111.195,56.762,-3.803)
C4': (-110.828,58.637,-7.051)
C2': (-111.960,57.942,-9.001)
O2': (-112.971,58.178,-9.952)
N1: (-108.206,58.862,-13.765)
N2: (-108.700,61.146,-13.658)
N3: (-109.422,59.771,-11.894)
N7: (-109.009,56.198,-11.409)
N9: (-109.901,57.942,-10.366)
O5': (-110.497,57.777,-4.816)
O3': (-112.771,59.846,-7.852)
OP2: (-111.228,57.345,-2.438)
C3': (-112.230,58.543,-7.652)
C1': (-110.671,58.649,-9.368)
C5': (-110.422,57.474,-6.197)
O6: (-107.619,56.612,-14.009)
O4': (-109.927,58.709,-8.178)
C8: (-109.663,56.594,-10.367)
C2: (-108.793,59.923,-13.070)
C6: (-108.165,57.514,-13.357)
C5: (-108.822,57.359,-12.128)
C4: (-109.387,58.464,-11.509)
P: (-111.195,56.762,-3.803)
C4': (-110.828,58.637,-7.051)
C2': (-111.960,57.942,-9.001)
O2': (-112.971,58.178,-9.952)
N1: (-108.206,58.862,-13.765)
N2: (-108.700,61.146,-13.658)
N3: (-109.422,59.771,-11.894)
N7: (-109.009,56.198,-11.409)
N9: (-109.901,57.942,-10.366)
O5': (-110.497,57.777,-4.816)
O3': (-112.771,59.846,-7.852)
Image (generated by PyMOL):