Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1840:1841
Extra
PDB:
ATOM 1 O3' A A 839 2.367 19.937 107.993 1.00 61.17 O
ATOM 2 P A A 840 2.294 18.583 108.879 1.00 43.53 P
ATOM 3 OP1 A A 840 0.885 18.171 108.912 1.00 43.69 O
ATOM 4 OP2 A A 840 2.998 18.827 110.159 1.00 43.80 O
ATOM 5 O5' A A 840 3.128 17.556 108.009 1.00 42.97 O
ATOM 6 C5' A A 840 3.707 16.416 108.621 1.00 42.82 C
ATOM 7 C4' A A 840 4.780 15.810 107.770 1.00 42.33 C
ATOM 8 O4' A A 840 4.181 14.854 106.868 1.00 42.03 O
ATOM 9 C3' A A 840 5.579 16.801 106.914 1.00 42.18 C
ATOM 10 O3' A A 840 6.990 16.696 107.207 1.00 42.03 O
ATOM 11 C2' A A 840 5.325 16.351 105.466 1.00 41.79 C
ATOM 12 O2' A A 840 6.504 16.387 104.633 1.00 41.43 O
ATOM 13 C1' A A 840 4.830 14.915 105.637 1.00 41.65 C
ATOM 14 N9 A A 840 3.936 14.446 104.564 1.00 41.46 N
ATOM 15 C8 A A 840 3.025 15.135 103.824 1.00 41.56 C
ATOM 16 N7 A A 840 2.460 14.441 102.859 1.00 41.32 N
ATOM 17 C5 A A 840 3.065 13.194 102.941 1.00 41.03 C
ATOM 18 C6 A A 840 2.933 11.997 102.217 1.00 40.70 C
ATOM 19 N6 A A 840 2.099 11.810 101.208 1.00 40.60 N
ATOM 20 N1 A A 840 3.699 10.960 102.538 1.00 40.49 N
ATOM 21 C2 A A 840 4.528 11.086 103.537 1.00 40.59 C
ATOM 22 N3 A A 840 4.764 12.138 104.295 1.00 40.89 N
ATOM 23 C4 A A 840 3.986 13.191 103.958 1.00 41.10 C
ATOM 24 P U A 841 7.705 17.751 108.195 1.00 42.13 P
ATOM 25 OP1 U A 841 8.676 16.984 108.997 1.00 42.06 O
ATOM 26 OP2 U A 841 6.639 18.500 108.912 1.00 42.61 O
ATOM 27 O5' U A 841 8.480 18.736 107.198 1.00 41.97 O
TER
ATOM 1 O3' A B 840 6.990 16.696 107.207 1.00 42.03 O
ATOM 2 P U B 841 7.705 17.751 108.195 1.00 42.13 P
ATOM 3 OP1 U B 841 8.676 16.984 108.997 1.00 42.06 O
ATOM 4 OP2 U B 841 6.639 18.500 108.912 1.00 42.61 O
ATOM 5 O5' U B 841 8.480 18.736 107.198 1.00 41.97 O
ATOM 6 C5' U B 841 7.812 19.377 106.114 1.00 41.92 C
ATOM 7 C4' U B 841 8.446 20.710 105.766 1.00 42.02 C
ATOM 8 O4' U B 841 7.954 21.744 106.668 1.00 42.53 O
ATOM 9 C3' U B 841 9.962 20.795 105.895 1.00 41.87 C
ATOM 10 O3' U B 841 10.642 20.299 104.769 1.00 41.41 O
ATOM 11 C2' U B 841 10.191 22.271 106.094 1.00 42.21 C
ATOM 12 O2' U B 841 10.095 22.922 104.850 1.00 42.07 O
ATOM 13 C1' U B 841 8.978 22.670 106.932 1.00 42.66 C
ATOM 14 N1 U B 841 9.253 22.671 108.396 1.00 43.00 N
ATOM 15 C2 U B 841 10.052 23.647 108.977 1.00 43.26 C
ATOM 16 O2 U B 841 10.627 24.516 108.356 1.00 43.23 O
ATOM 17 N3 U B 841 10.210 23.557 110.334 1.00 43.59 N
ATOM 18 C4 U B 841 9.639 22.605 111.161 1.00 43.67 C
ATOM 19 O4 U B 841 9.847 22.663 112.379 1.00 44.00 O
ATOM 20 C5 U B 841 8.842 21.609 110.504 1.00 43.37 C
ATOM 21 C6 U B 841 8.677 21.695 109.181 1.00 43.06 C
ATOM 22 P U B 842 12.106 19.657 104.944 1.00 44.55 P
ATOM 23 OP1 U B 842 12.521 19.132 103.622 1.00 44.08 O
ATOM 24 OP2 U B 842 12.027 18.717 106.087 1.00 44.64 O
ATOM 25 O5' U B 842 13.012 20.907 105.342 1.00 44.79 O
TER
ATOM 2 P A A 840 2.294 18.583 108.879 1.00 43.53 P
ATOM 3 OP1 A A 840 0.885 18.171 108.912 1.00 43.69 O
ATOM 4 OP2 A A 840 2.998 18.827 110.159 1.00 43.80 O
ATOM 5 O5' A A 840 3.128 17.556 108.009 1.00 42.97 O
ATOM 6 C5' A A 840 3.707 16.416 108.621 1.00 42.82 C
ATOM 7 C4' A A 840 4.780 15.810 107.770 1.00 42.33 C
ATOM 8 O4' A A 840 4.181 14.854 106.868 1.00 42.03 O
ATOM 9 C3' A A 840 5.579 16.801 106.914 1.00 42.18 C
ATOM 10 O3' A A 840 6.990 16.696 107.207 1.00 42.03 O
ATOM 11 C2' A A 840 5.325 16.351 105.466 1.00 41.79 C
ATOM 12 O2' A A 840 6.504 16.387 104.633 1.00 41.43 O
ATOM 13 C1' A A 840 4.830 14.915 105.637 1.00 41.65 C
ATOM 14 N9 A A 840 3.936 14.446 104.564 1.00 41.46 N
ATOM 15 C8 A A 840 3.025 15.135 103.824 1.00 41.56 C
ATOM 16 N7 A A 840 2.460 14.441 102.859 1.00 41.32 N
ATOM 17 C5 A A 840 3.065 13.194 102.941 1.00 41.03 C
ATOM 18 C6 A A 840 2.933 11.997 102.217 1.00 40.70 C
ATOM 19 N6 A A 840 2.099 11.810 101.208 1.00 40.60 N
ATOM 20 N1 A A 840 3.699 10.960 102.538 1.00 40.49 N
ATOM 21 C2 A A 840 4.528 11.086 103.537 1.00 40.59 C
ATOM 22 N3 A A 840 4.764 12.138 104.295 1.00 40.89 N
ATOM 23 C4 A A 840 3.986 13.191 103.958 1.00 41.10 C
ATOM 24 P U A 841 7.705 17.751 108.195 1.00 42.13 P
ATOM 25 OP1 U A 841 8.676 16.984 108.997 1.00 42.06 O
ATOM 26 OP2 U A 841 6.639 18.500 108.912 1.00 42.61 O
ATOM 27 O5' U A 841 8.480 18.736 107.198 1.00 41.97 O
TER
ATOM 1 O3' A B 840 6.990 16.696 107.207 1.00 42.03 O
ATOM 2 P U B 841 7.705 17.751 108.195 1.00 42.13 P
ATOM 3 OP1 U B 841 8.676 16.984 108.997 1.00 42.06 O
ATOM 4 OP2 U B 841 6.639 18.500 108.912 1.00 42.61 O
ATOM 5 O5' U B 841 8.480 18.736 107.198 1.00 41.97 O
ATOM 6 C5' U B 841 7.812 19.377 106.114 1.00 41.92 C
ATOM 7 C4' U B 841 8.446 20.710 105.766 1.00 42.02 C
ATOM 8 O4' U B 841 7.954 21.744 106.668 1.00 42.53 O
ATOM 9 C3' U B 841 9.962 20.795 105.895 1.00 41.87 C
ATOM 10 O3' U B 841 10.642 20.299 104.769 1.00 41.41 O
ATOM 11 C2' U B 841 10.191 22.271 106.094 1.00 42.21 C
ATOM 12 O2' U B 841 10.095 22.922 104.850 1.00 42.07 O
ATOM 13 C1' U B 841 8.978 22.670 106.932 1.00 42.66 C
ATOM 14 N1 U B 841 9.253 22.671 108.396 1.00 43.00 N
ATOM 15 C2 U B 841 10.052 23.647 108.977 1.00 43.26 C
ATOM 16 O2 U B 841 10.627 24.516 108.356 1.00 43.23 O
ATOM 17 N3 U B 841 10.210 23.557 110.334 1.00 43.59 N
ATOM 18 C4 U B 841 9.639 22.605 111.161 1.00 43.67 C
ATOM 19 O4 U B 841 9.847 22.663 112.379 1.00 44.00 O
ATOM 20 C5 U B 841 8.842 21.609 110.504 1.00 43.37 C
ATOM 21 C6 U B 841 8.677 21.695 109.181 1.00 43.06 C
ATOM 22 P U B 842 12.106 19.657 104.944 1.00 44.55 P
ATOM 23 OP1 U B 842 12.521 19.132 103.622 1.00 44.08 O
ATOM 24 OP2 U B 842 12.027 18.717 106.087 1.00 44.64 O
ATOM 25 O5' U B 842 13.012 20.907 105.342 1.00 44.79 O
TER
Atoms:
OP1: (0.885,18.171,108.912)
OP2: (2.998,18.827,110.159)
C3': (5.579,16.801,106.914)
C1': (4.830,14.915,105.637)
C5': (3.707,16.416,108.621)
O4': (4.181,14.854,106.868)
C8: (3.025,15.135,103.824)
O2': (6.504,16.387,104.633)
C6: (2.933,11.997,102.217)
C5: (3.065,13.194,102.941)
C4: (3.986,13.191,103.958)
P: (2.294,18.583,108.879)
C4': (4.780,15.810,107.770)
C2': (5.325,16.351,105.466)
C2: (4.528,11.086,103.537)
N1: (3.699,10.960,102.538)
N3: (4.764,12.138,104.295)
N6: (2.099,11.810,101.208)
N7: (2.460,14.441,102.859)
N9: (3.936,14.446,104.564)
O5': (3.128,17.556,108.009)
O3': (6.990,16.696,107.207)
OP2: (2.998,18.827,110.159)
C3': (5.579,16.801,106.914)
C1': (4.830,14.915,105.637)
C5': (3.707,16.416,108.621)
O4': (4.181,14.854,106.868)
C8: (3.025,15.135,103.824)
O2': (6.504,16.387,104.633)
C6: (2.933,11.997,102.217)
C5: (3.065,13.194,102.941)
C4: (3.986,13.191,103.958)
P: (2.294,18.583,108.879)
C4': (4.780,15.810,107.770)
C2': (5.325,16.351,105.466)
C2: (4.528,11.086,103.537)
N1: (3.699,10.960,102.538)
N3: (4.764,12.138,104.295)
N6: (2.099,11.810,101.208)
N7: (2.460,14.441,102.859)
N9: (3.936,14.446,104.564)
O5': (3.128,17.556,108.009)
O3': (6.990,16.696,107.207)
C4: (9.639,22.605,111.161)
N3: (10.210,23.557,110.334)
OP1: (8.676,16.984,108.997)
OP2: (6.639,18.500,108.912)
C2: (10.052,23.647,108.977)
C1': (8.978,22.670,106.932)
C3': (9.962,20.795,105.895)
O5': (8.480,18.736,107.198)
O4': (7.954,21.744,106.668)
C5': (7.812,19.377,106.114)
P: (7.705,17.751,108.195)
C4': (8.446,20.710,105.766)
C2': (10.191,22.271,106.094)
O2': (10.095,22.922,104.850)
N1: (9.253,22.671,108.396)
O4: (9.847,22.663,112.379)
O2: (10.627,24.516,108.356)
C6: (8.677,21.695,109.181)
C5: (8.842,21.609,110.504)
O3': (10.642,20.299,104.769)
N3: (10.210,23.557,110.334)
OP1: (8.676,16.984,108.997)
OP2: (6.639,18.500,108.912)
C2: (10.052,23.647,108.977)
C1': (8.978,22.670,106.932)
C3': (9.962,20.795,105.895)
O5': (8.480,18.736,107.198)
O4': (7.954,21.744,106.668)
C5': (7.812,19.377,106.114)
P: (7.705,17.751,108.195)
C4': (8.446,20.710,105.766)
C2': (10.191,22.271,106.094)
O2': (10.095,22.922,104.850)
N1: (9.253,22.671,108.396)
O4: (9.847,22.663,112.379)
O2: (10.627,24.516,108.356)
C6: (8.677,21.695,109.181)
C5: (8.842,21.609,110.504)
O3': (10.642,20.299,104.769)
Image (generated by PyMOL):