ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJN:938:942

Extra

PDB:
ATOM 1 O3' A A 37 85.661 25.041 87.179 1.00 74.65 O
ATOM 2 P U A 38 87.008 25.604 86.520 1.00 76.60 P
ATOM 3 OP1 U A 38 86.576 26.507 85.427 1.00 77.80 O
ATOM 4 OP2 U A 38 87.907 24.463 86.219 1.00 77.16 O
ATOM 5 O5' U A 38 87.680 26.468 87.674 1.00 76.79 O
ATOM 6 C5' U A 38 86.866 27.135 88.642 1.00 80.16 C
ATOM 7 C4' U A 38 87.060 26.510 90.002 1.00 81.78 C
ATOM 8 O4' U A 38 87.184 25.085 89.844 1.00 81.90 O
ATOM 9 C3' U A 38 88.343 26.861 90.742 1.00 81.97 C
ATOM 10 O3' U A 38 88.082 28.143 91.349 1.00 80.68 O
ATOM 11 C2' U A 38 88.489 25.695 91.738 1.00 82.29 C
ATOM 12 O2' U A 38 87.820 25.936 92.956 1.00 84.40 O
ATOM 13 C1' U A 38 87.717 24.566 91.036 1.00 82.53 C
ATOM 14 N1 U A 38 88.316 23.241 90.784 1.00 82.95 N
ATOM 15 C2 U A 38 88.805 22.520 91.868 1.00 83.32 C
ATOM 16 O2 U A 38 88.831 22.959 93.007 1.00 84.68 O
ATOM 17 N3 U A 38 89.268 21.261 91.567 1.00 82.05 N
ATOM 18 C4 U A 38 89.306 20.662 90.328 1.00 81.13 C
ATOM 19 O4 U A 38 89.725 19.511 90.229 1.00 80.66 O
ATOM 20 C5 U A 38 88.818 21.471 89.259 1.00 81.53 C
ATOM 21 C6 U A 38 88.358 22.703 89.513 1.00 82.67 C
ATOM 22 P C A 39 89.144 28.837 92.339 1.00 80.23 P
ATOM 23 OP1 C A 39 89.421 27.896 93.438 1.00 81.78 O
ATOM 24 OP2 C A 39 88.602 30.180 92.653 1.00 80.26 O
ATOM 25 O5' C A 39 90.483 29.027 91.492 1.00 82.46 O
TER

ATOM 1 O3' C B 41 90.004 18.591 95.436 1.00 86.21 O
ATOM 2 P G B 42 89.245 17.946 94.186 1.00 86.24 P
ATOM 3 OP1 G B 42 89.036 16.502 94.458 1.00 87.55 O
ATOM 4 OP2 G B 42 89.945 18.361 92.941 1.00 85.20 O
ATOM 5 O5' G B 42 87.828 18.662 94.248 1.00 85.63 O
ATOM 6 C5' G B 42 86.801 18.310 93.330 1.00 83.78 C
ATOM 7 C4' G B 42 85.497 18.138 94.057 1.00 82.62 C
ATOM 8 O4' G B 42 84.510 17.663 93.116 1.00 82.70 O
ATOM 9 C3' G B 42 85.487 17.105 95.173 1.00 82.21 C
ATOM 10 O3' G B 42 84.392 17.396 96.037 1.00 81.56 O
ATOM 11 C2' G B 42 85.256 15.811 94.405 1.00 82.39 C
ATOM 12 O2' G B 42 84.641 14.815 95.193 1.00 83.43 O
ATOM 13 C1' G B 42 84.316 16.274 93.289 1.00 82.64 C
ATOM 14 N9 G B 42 84.543 15.633 91.996 1.00 82.38 N
ATOM 15 C8 G B 42 85.190 14.445 91.747 1.00 82.99 C
ATOM 16 N7 G B 42 85.192 14.119 90.483 1.00 82.78 N
ATOM 17 C5 G B 42 84.513 15.155 89.860 1.00 81.69 C
ATOM 18 C6 G B 42 84.188 15.345 88.501 1.00 81.71 C
ATOM 19 O6 G B 42 84.434 14.603 87.540 1.00 82.30 O
ATOM 20 N1 G B 42 83.495 16.536 88.305 1.00 81.00 N
ATOM 21 C2 G B 42 83.154 17.423 89.294 1.00 80.27 C
ATOM 22 N2 G B 42 82.479 18.509 88.912 1.00 81.07 N
ATOM 23 N3 G B 42 83.449 17.254 90.565 1.00 80.29 N
ATOM 24 C4 G B 42 84.121 16.106 90.777 1.00 81.54 C
ATOM 25 P A B 43 84.499 17.101 97.615 1.00 80.13 P
ATOM 26 OP1 A B 43 85.925 17.114 98.048 1.00 80.79 O
ATOM 27 OP2 A B 43 83.658 15.908 97.878 1.00 78.96 O
ATOM 28 O5' A B 43 83.778 18.364 98.260 1.00 80.78 O
TER

Atoms:
C4: (89.306,20.662,90.328)
N3: (89.268,21.261,91.567)
OP1: (86.576,26.507,85.427)
OP2: (87.907,24.463,86.219)
C2: (88.805,22.520,91.868)
C1': (87.717,24.566,91.036)
C3': (88.343,26.861,90.742)
O5': (87.680,26.468,87.674)
O4': (87.184,25.085,89.844)
C5': (86.866,27.135,88.642)
P: (87.008,25.604,86.520)
C4': (87.060,26.510,90.002)
C2': (88.489,25.695,91.738)
O2': (87.820,25.936,92.956)
N1: (88.316,23.241,90.784)
O4: (89.725,19.511,90.229)
O2: (88.831,22.959,93.007)
C6: (88.358,22.703,89.513)
C5: (88.818,21.471,89.259)
O3': (88.082,28.143,91.349)
OP1: (89.036,16.502,94.458)
OP2: (89.945,18.361,92.941)
C3': (85.487,17.105,95.173)
C1': (84.316,16.274,93.289)
C5': (86.801,18.310,93.330)
O6: (84.434,14.603,87.540)
O4': (84.510,17.663,93.116)
C8: (85.190,14.445,91.747)
C2: (83.154,17.423,89.294)
C6: (84.188,15.345,88.501)
C5: (84.513,15.155,89.860)
C4: (84.121,16.106,90.777)
P: (89.245,17.946,94.186)
C4': (85.497,18.138,94.057)
C2': (85.256,15.811,94.405)
O2': (84.641,14.815,95.193)
N1: (83.495,16.536,88.305)
N2: (82.479,18.509,88.912)
N3: (83.449,17.254,90.565)
N7: (85.192,14.119,90.483)
N9: (84.543,15.633,91.996)
O5': (87.828,18.662,94.248)
O3': (84.392,17.396,96.037)
Image (generated by PyMOL):
PyMOL image
show in jmol