ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1U9S:A103:A106

Extra

PDB:
ATOM 1 O3' G A 102 66.007 -0.662 129.197 1.00 57.83 O
ATOM 2 P U A 103 67.279 -1.644 129.240 1.00 57.46 P
ATOM 3 OP1 U A 103 67.923 -1.369 130.549 1.00 47.10 O
ATOM 4 OP2 U A 103 68.061 -1.493 127.971 1.00 46.66 O
ATOM 5 O5' U A 103 66.619 -3.092 129.280 1.00 55.58 O
ATOM 6 C5' U A 103 65.878 -3.487 130.424 1.00 59.08 C
ATOM 7 C4' U A 103 65.255 -4.850 130.225 1.00 60.43 C
ATOM 8 O4' U A 103 64.235 -4.766 129.201 1.00 61.05 O
ATOM 9 C3' U A 103 66.181 -5.944 129.725 1.00 62.13 C
ATOM 10 O3' U A 103 66.926 -6.526 130.785 1.00 67.13 O
ATOM 11 C2' U A 103 65.200 -6.926 129.099 1.00 61.39 C
ATOM 12 O2' U A 103 64.490 -7.693 130.055 1.00 65.93 O
ATOM 13 C1' U A 103 64.201 -5.972 128.462 1.00 58.15 C
ATOM 14 N1 U A 103 64.497 -5.675 127.059 1.00 53.31 N
ATOM 15 C2 U A 103 63.961 -6.519 126.117 1.00 55.12 C
ATOM 16 O2 U A 103 63.305 -7.497 126.414 1.00 63.27 O
ATOM 17 N3 U A 103 64.220 -6.180 124.815 1.00 51.77 N
ATOM 18 C4 U A 103 64.951 -5.110 124.379 1.00 45.25 C
ATOM 19 O4 U A 103 65.082 -4.929 123.177 1.00 53.52 O
ATOM 20 C5 U A 103 65.489 -4.290 125.415 1.00 51.38 C
ATOM 21 C6 U A 103 65.253 -4.597 126.695 1.00 50.25 C
ATOM 22 P A A 104 68.410 -7.065 130.499 1.00 70.56 P
ATOM 23 OP1 A A 104 68.865 -7.781 131.718 1.00 70.79 O
ATOM 24 OP2 A A 104 69.219 -5.932 129.962 1.00 67.19 O
ATOM 25 O5' A A 104 68.213 -8.127 129.327 1.00 63.72 O
TER

ATOM 1 O3' A B 105 63.432 -10.511 122.378 1.00 53.12 O
ATOM 2 P G B 106 62.650 -9.195 121.932 1.00 56.86 P
ATOM 3 OP1 G B 106 62.579 -9.105 120.443 1.00 41.10 O
ATOM 4 OP2 G B 106 63.287 -8.097 122.731 1.00 47.89 O
ATOM 5 O5' G B 106 61.195 -9.407 122.549 1.00 52.39 O
ATOM 6 C5' G B 106 60.612 -8.377 123.341 1.00 53.31 C
ATOM 7 C4' G B 106 59.348 -8.860 123.987 1.00 48.34 C
ATOM 8 O4' G B 106 59.666 -9.398 125.290 1.00 53.90 O
ATOM 9 C3' G B 106 58.390 -7.744 124.325 1.00 49.02 C
ATOM 10 O3' G B 106 57.596 -7.408 123.213 1.00 42.43 O
ATOM 11 C2' G B 106 57.554 -8.353 125.427 1.00 47.79 C
ATOM 12 O2' G B 106 56.663 -9.292 124.861 1.00 54.18 O
ATOM 13 C1' G B 106 58.615 -9.118 126.197 1.00 44.79 C
ATOM 14 N9 G B 106 59.172 -8.407 127.336 1.00 42.22 N
ATOM 15 C8 G B 106 60.474 -8.007 127.504 1.00 39.56 C
ATOM 16 N7 G B 106 60.701 -7.496 128.687 1.00 47.42 N
ATOM 17 C5 G B 106 59.465 -7.535 129.324 1.00 40.86 C
ATOM 18 C6 G B 106 59.090 -7.133 130.636 1.00 40.75 C
ATOM 19 O6 G B 106 59.803 -6.654 131.529 1.00 51.97 O
ATOM 20 N1 G B 106 57.733 -7.341 130.872 1.00 34.15 N
ATOM 21 C2 G B 106 56.855 -7.878 129.968 1.00 42.77 C
ATOM 22 N2 G B 106 55.585 -8.012 130.381 1.00 42.45 N
ATOM 23 N3 G B 106 57.194 -8.263 128.742 1.00 47.88 N
ATOM 24 C4 G B 106 58.506 -8.067 128.494 1.00 44.36 C
ATOM 25 P A B 107 57.092 -5.909 123.077 1.00 43.55 P
ATOM 26 OP1 A B 107 56.562 -5.799 121.690 1.00 30.93 O
ATOM 27 OP2 A B 107 58.204 -5.019 123.525 1.00 34.61 O
ATOM 28 O5' A B 107 55.912 -5.809 124.155 1.00 37.04 O
TER

Atoms:
C4: (64.951,-5.110,124.379)
N3: (64.220,-6.180,124.815)
OP1: (67.923,-1.369,130.549)
OP2: (68.061,-1.493,127.971)
C2: (63.961,-6.519,126.117)
C1': (64.201,-5.972,128.462)
C3': (66.181,-5.944,129.725)
O5': (66.619,-3.092,129.280)
O4': (64.235,-4.766,129.201)
C5': (65.878,-3.487,130.424)
P: (67.279,-1.644,129.240)
C4': (65.255,-4.850,130.225)
C2': (65.200,-6.926,129.099)
O2': (64.490,-7.693,130.055)
N1: (64.497,-5.675,127.059)
O4: (65.082,-4.929,123.177)
O2: (63.305,-7.497,126.414)
C6: (65.253,-4.597,126.695)
C5: (65.489,-4.290,125.415)
O3': (66.926,-6.526,130.785)
OP1: (62.579,-9.105,120.443)
OP2: (63.287,-8.097,122.731)
C3': (58.390,-7.744,124.325)
C1': (58.615,-9.118,126.197)
C5': (60.612,-8.377,123.341)
O6: (59.803,-6.654,131.529)
O4': (59.666,-9.398,125.290)
C8: (60.474,-8.007,127.504)
C2: (56.855,-7.878,129.968)
C6: (59.090,-7.133,130.636)
C5: (59.465,-7.535,129.324)
C4: (58.506,-8.067,128.494)
P: (62.650,-9.195,121.932)
C4': (59.348,-8.860,123.987)
C2': (57.554,-8.353,125.427)
O2': (56.663,-9.292,124.861)
N1: (57.733,-7.341,130.872)
N2: (55.585,-8.012,130.381)
N3: (57.194,-8.263,128.742)
N7: (60.701,-7.496,128.687)
N9: (59.172,-8.407,127.336)
O5': (61.195,-9.407,122.549)
O3': (57.596,-7.408,123.213)
Image (generated by PyMOL):
PyMOL image
show in jmol