ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJ9:0891:01313

Extra

PDB:
ATOM 1 O3' U A 890 40.013 114.272 73.054 1.00 32.43 O
ATOM 2 P U A 891 38.867 113.485 73.863 1.00 32.71 P
ATOM 3 OP1 U A 891 39.236 113.407 75.289 1.00 35.09 O
ATOM 4 OP2 U A 891 38.549 112.250 73.140 1.00 35.60 O
ATOM 5 O5' U A 891 37.597 114.423 73.706 1.00 33.90 O
ATOM 6 C5' U A 891 37.366 115.546 74.568 1.00 32.88 C
ATOM 7 C4' U A 891 36.356 116.470 73.931 1.00 35.10 C
ATOM 8 O4' U A 891 36.989 117.209 72.855 1.00 36.23 O
ATOM 9 C3' U A 891 35.153 115.772 73.307 1.00 34.71 C
ATOM 10 O3' U A 891 34.018 116.595 73.393 1.00 35.50 O
ATOM 11 C2' U A 891 35.555 115.645 71.852 1.00 35.09 C
ATOM 12 O2' U A 891 34.429 115.547 71.013 1.00 34.72 O
ATOM 13 C1' U A 891 36.322 116.948 71.640 1.00 36.56 C
ATOM 14 N1 U A 891 37.342 116.866 70.586 1.00 38.83 N
ATOM 15 C2 U A 891 37.145 117.599 69.435 1.00 40.02 C
ATOM 16 O2 U A 891 36.188 118.321 69.263 1.00 41.30 O
ATOM 17 N3 U A 891 38.124 117.465 68.490 1.00 40.53 N
ATOM 18 C4 U A 891 39.262 116.704 68.582 1.00 41.07 C
ATOM 19 O4 U A 891 40.058 116.692 67.646 1.00 42.38 O
ATOM 20 C5 U A 891 39.401 115.986 69.808 1.00 42.08 C
ATOM 21 C6 U A 891 38.457 116.086 70.743 1.00 39.49 C
ATOM 22 P C A 892 32.887 116.256 74.468 1.00 38.53 P
ATOM 23 OP1 C A 892 31.760 117.187 74.240 1.00 37.42 O
ATOM 24 OP2 C A 892 33.537 116.210 75.790 1.00 39.46 O
ATOM 25 O5' C A 892 32.441 114.770 74.113 1.00 37.82 O
TER

ATOM 1 O3' C B1312 35.163 118.387 64.196 1.00 41.19 O
ATOM 2 P G B1313 35.760 117.643 65.481 1.00 38.77 P
ATOM 3 OP1 G B1313 37.061 118.291 65.759 1.00 39.52 O
ATOM 4 OP2 G B1313 35.699 116.168 65.293 1.00 35.25 O
ATOM 5 O5' G B1313 34.748 118.104 66.615 1.00 35.66 O
ATOM 6 C5' G B1313 34.263 119.463 66.623 1.00 37.99 C
ATOM 7 C4' G B1313 33.068 119.591 67.526 1.00 38.20 C
ATOM 8 O4' G B1313 32.069 118.650 67.059 1.00 40.34 O
ATOM 9 C3' G B1313 33.313 119.251 68.993 1.00 37.86 C
ATOM 10 O3' G B1313 32.372 119.954 69.791 1.00 38.21 O
ATOM 11 C2' G B1313 32.969 117.769 69.039 1.00 38.69 C
ATOM 12 O2' G B1313 32.542 117.352 70.316 1.00 40.04 O
ATOM 13 C1' G B1313 31.788 117.721 68.079 1.00 39.27 C
ATOM 14 N9 G B1313 31.550 116.418 67.474 1.00 39.01 N
ATOM 15 C8 G B1313 32.427 115.644 66.746 1.00 39.40 C
ATOM 16 N7 G B1313 31.901 114.514 66.347 1.00 39.81 N
ATOM 17 C5 G B1313 30.602 114.550 66.843 1.00 39.91 C
ATOM 18 C6 G B1313 29.549 113.612 66.734 1.00 39.53 C
ATOM 19 O6 G B1313 29.547 112.519 66.147 1.00 41.17 O
ATOM 20 N1 G B1313 28.402 114.055 67.387 1.00 36.60 N
ATOM 21 C2 G B1313 28.281 115.252 68.041 1.00 37.40 C
ATOM 22 N2 G B1313 27.092 115.518 68.591 1.00 39.29 N
ATOM 23 N3 G B1313 29.249 116.132 68.148 1.00 37.58 N
ATOM 24 C4 G B1313 30.373 115.721 67.534 1.00 39.11 C
ATOM 25 P A B1314 32.806 121.293 70.563 1.00 40.81 P
ATOM 26 OP1 A B1314 31.603 121.797 71.292 1.00 38.84 O
ATOM 27 OP2 A B1314 33.486 122.165 69.567 1.00 38.84 O
ATOM 28 O5' A B1314 33.870 120.797 71.638 1.00 38.38 O
TER

Atoms:
C4: (39.262,116.704,68.582)
N3: (38.124,117.465,68.490)
OP1: (39.236,113.407,75.289)
OP2: (38.549,112.250,73.140)
C2: (37.145,117.599,69.435)
C1': (36.322,116.948,71.640)
C3': (35.153,115.772,73.307)
O5': (37.597,114.423,73.706)
O4': (36.989,117.209,72.855)
C5': (37.366,115.546,74.568)
P: (38.867,113.485,73.863)
C4': (36.356,116.470,73.931)
C2': (35.555,115.645,71.852)
O2': (34.429,115.547,71.013)
N1: (37.342,116.866,70.586)
O4: (40.058,116.692,67.646)
O2: (36.188,118.321,69.263)
C6: (38.457,116.086,70.743)
C5: (39.401,115.986,69.808)
O3': (34.018,116.595,73.393)
OP1: (37.061,118.291,65.759)
OP2: (35.699,116.168,65.293)
C3': (33.313,119.251,68.993)
C1': (31.788,117.721,68.079)
C5': (34.263,119.463,66.623)
O6: (29.547,112.519,66.147)
O4': (32.069,118.650,67.059)
C8: (32.427,115.644,66.746)
C2: (28.281,115.252,68.041)
C6: (29.549,113.612,66.734)
C5: (30.602,114.550,66.843)
C4: (30.373,115.721,67.534)
P: (35.760,117.643,65.481)
C4': (33.068,119.591,67.526)
C2': (32.969,117.769,69.039)
O2': (32.542,117.352,70.316)
N1: (28.402,114.055,67.387)
N2: (27.092,115.518,68.591)
N3: (29.249,116.132,68.148)
N7: (31.901,114.514,66.347)
N9: (31.550,116.418,67.474)
O5': (34.748,118.104,66.615)
O3': (32.372,119.954,69.791)
Image (generated by PyMOL):
PyMOL image
show in jmol