ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQP:01390:01649

Extra

PDB:
ATOM 1 O3' G A1389 57.003 162.797 78.797 1.00 44.00 O
ATOM 2 P C A1390 58.129 162.047 79.664 1.00 45.56 P
ATOM 3 OP1 C A1390 58.902 163.117 80.347 1.00 45.61 O
ATOM 4 OP2 C A1390 58.827 161.076 78.781 1.00 46.69 O
ATOM 5 O5' C A1390 57.315 161.231 80.760 1.00 43.57 O
ATOM 6 C5' C A1390 56.689 161.910 81.851 1.00 41.76 C
ATOM 7 C4' C A1390 55.556 161.085 82.405 1.00 39.50 C
ATOM 8 O4' C A1390 56.070 159.833 82.956 1.00 38.09 O
ATOM 9 C3' C A1390 54.811 161.763 83.547 1.00 39.50 C
ATOM 10 O3' C A1390 53.456 161.339 83.504 1.00 40.47 O
ATOM 11 C2' C A1390 55.504 161.175 84.771 1.00 38.44 C
ATOM 12 O2' C A1390 54.752 161.230 85.963 1.00 42.32 O
ATOM 13 C1' C A1390 55.699 159.735 84.315 1.00 37.88 C
ATOM 14 N1 C A1390 56.727 158.966 85.040 1.00 38.45 N
ATOM 15 C2 C A1390 56.386 157.705 85.557 1.00 35.52 C
ATOM 16 O2 C A1390 55.232 157.291 85.417 1.00 35.47 O
ATOM 17 N3 C A1390 57.323 156.978 86.202 1.00 37.41 N
ATOM 18 C4 C A1390 58.552 157.468 86.362 1.00 37.53 C
ATOM 19 N4 C A1390 59.433 156.722 87.016 1.00 37.57 N
ATOM 20 C5 C A1390 58.927 158.752 85.859 1.00 37.96 C
ATOM 21 C6 C A1390 57.993 159.459 85.210 1.00 36.90 C
ATOM 22 P U A1391 52.394 162.136 82.606 1.00 39.61 P
ATOM 23 OP1 U A1391 51.565 161.113 81.921 1.00 44.00 O
ATOM 24 OP2 U A1391 53.104 163.151 81.796 1.00 40.86 O
ATOM 25 O5' U A1391 51.477 162.857 83.689 1.00 39.43 O
TER

ATOM 1 O3' C B1648 61.026 156.542 74.285 1.00 39.45 O
ATOM 2 P A B1649 60.873 157.791 73.287 1.00 41.94 P
ATOM 3 OP1 A B1649 59.428 158.142 73.242 1.00 42.62 O
ATOM 4 OP2 A B1649 61.594 157.490 72.017 1.00 42.32 O
ATOM 5 O5' A B1649 61.607 158.989 74.046 1.00 41.18 O
ATOM 6 C5' A B1649 63.041 159.151 74.006 1.00 36.05 C
ATOM 7 C4' A B1649 63.484 160.046 75.143 1.00 37.76 C
ATOM 8 O4' A B1649 62.786 161.316 75.046 1.00 34.79 O
ATOM 9 C3' A B1649 63.173 159.533 76.546 1.00 38.17 C
ATOM 10 O3' A B1649 64.100 160.151 77.423 1.00 38.08 O
ATOM 11 C2' A B1649 61.795 160.122 76.805 1.00 37.53 C
ATOM 12 O2' A B1649 61.498 160.185 78.186 1.00 40.57 O
ATOM 13 C1' A B1649 61.976 161.510 76.186 1.00 37.36 C
ATOM 14 N9 A B1649 60.770 162.204 75.746 1.00 37.96 N
ATOM 15 C8 A B1649 60.008 161.922 74.643 1.00 38.48 C
ATOM 16 N7 A B1649 59.022 162.762 74.455 1.00 39.00 N
ATOM 17 C5 A B1649 59.132 163.646 75.515 1.00 37.81 C
ATOM 18 C6 A B1649 58.382 164.772 75.878 1.00 39.09 C
ATOM 19 N6 A B1649 57.337 165.225 75.173 1.00 37.75 N
ATOM 20 N1 A B1649 58.744 165.428 76.999 1.00 38.30 N
ATOM 21 C2 A B1649 59.797 164.981 77.690 1.00 40.98 C
ATOM 22 N3 A B1649 60.590 163.939 77.441 1.00 40.97 N
ATOM 23 C4 A B1649 60.195 163.305 76.327 1.00 37.60 C
ATOM 24 P C B1650 65.265 159.291 78.085 1.00 40.45 P
ATOM 25 OP1 C B1650 66.111 160.188 78.906 1.00 42.83 O
ATOM 26 OP2 C B1650 65.880 158.494 77.019 1.00 40.66 O
ATOM 27 O5' C B1650 64.483 158.408 79.155 1.00 42.33 O
TER

Atoms:
C2: (56.386,157.705,85.557)
OP1: (58.902,163.117,80.347)
OP2: (58.827,161.076,78.781)
C4: (58.552,157.468,86.362)
O5': (57.315,161.231,80.760)
C3': (54.811,161.763,83.547)
C1': (55.699,159.735,84.315)
O4': (56.070,159.833,82.956)
C5': (56.689,161.910,81.851)
P: (58.129,162.047,79.664)
O2: (55.232,157.291,85.417)
C4': (55.556,161.085,82.405)
C2': (55.504,161.175,84.771)
O2': (54.752,161.230,85.963)
N1: (56.727,158.966,85.040)
N3: (57.323,156.978,86.202)
N4: (59.433,156.722,87.016)
C6: (57.993,159.459,85.210)
C5: (58.927,158.752,85.859)
O3': (53.456,161.339,83.504)
OP1: (59.428,158.142,73.242)
OP2: (61.594,157.490,72.017)
C3': (63.173,159.533,76.546)
C1': (61.976,161.510,76.186)
C5': (63.041,159.151,74.006)
O4': (62.786,161.316,75.046)
C8: (60.008,161.922,74.643)
O2': (61.498,160.185,78.186)
C6: (58.382,164.772,75.878)
C5: (59.132,163.646,75.515)
C4: (60.195,163.305,76.327)
P: (60.873,157.791,73.287)
C4': (63.484,160.046,75.143)
C2': (61.795,160.122,76.805)
C2: (59.797,164.981,77.690)
N1: (58.744,165.428,76.999)
N3: (60.590,163.939,77.441)
N6: (57.337,165.225,75.173)
N7: (59.022,162.762,74.455)
N9: (60.770,162.204,75.746)
O5': (61.607,158.989,74.046)
O3': (64.100,160.151,77.423)
Image (generated by PyMOL):
PyMOL image
show in jmol