Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01390:01649
Extra
PDB:
ATOM 1 O3' G A1389 57.549 164.110 78.651 1.00 40.10 O
ATOM 2 P C A1390 58.598 163.449 79.669 1.00 40.45 P
ATOM 3 OP1 C A1390 59.159 164.569 80.478 1.00 37.56 O
ATOM 4 OP2 C A1390 59.504 162.575 78.879 1.00 36.33 O
ATOM 5 O5' C A1390 57.700 162.549 80.627 1.00 37.42 O
ATOM 6 C5' C A1390 57.005 163.138 81.725 1.00 36.15 C
ATOM 7 C4' C A1390 55.914 162.225 82.206 1.00 35.93 C
ATOM 8 O4' C A1390 56.481 160.976 82.703 1.00 35.46 O
ATOM 9 C3' C A1390 55.087 162.798 83.350 1.00 36.07 C
ATOM 10 O3' C A1390 53.756 162.343 83.203 1.00 38.44 O
ATOM 11 C2' C A1390 55.707 162.140 84.573 1.00 35.27 C
ATOM 12 O2' C A1390 54.818 162.041 85.663 1.00 37.52 O
ATOM 13 C1' C A1390 56.031 160.755 84.025 1.00 35.34 C
ATOM 14 N1 C A1390 57.072 160.038 84.783 1.00 36.22 N
ATOM 15 C2 C A1390 56.768 158.779 85.330 1.00 35.28 C
ATOM 16 O2 C A1390 55.644 158.294 85.148 1.00 35.19 O
ATOM 17 N3 C A1390 57.710 158.126 86.042 1.00 34.72 N
ATOM 18 C4 C A1390 58.912 158.672 86.217 1.00 34.20 C
ATOM 19 N4 C A1390 59.807 157.989 86.926 1.00 34.88 N
ATOM 20 C5 C A1390 59.251 159.944 85.672 1.00 35.14 C
ATOM 21 C6 C A1390 58.313 160.585 84.967 1.00 35.38 C
ATOM 22 P U A1391 52.715 163.199 82.340 1.00 39.00 P
ATOM 23 OP1 U A1391 51.861 162.202 81.644 1.00 40.94 O
ATOM 24 OP2 U A1391 53.457 164.212 81.540 1.00 37.14 O
ATOM 25 O5' U A1391 51.842 163.946 83.442 1.00 34.01 O
TER
ATOM 1 O3' C B1648 61.095 157.603 74.564 1.00 37.63 O
ATOM 2 P A B1649 60.892 158.904 73.642 1.00 39.37 P
ATOM 3 OP1 A B1649 59.460 159.281 73.802 1.00 39.56 O
ATOM 4 OP2 A B1649 61.452 158.672 72.279 1.00 40.23 O
ATOM 5 O5' A B1649 61.732 160.045 74.367 1.00 38.50 O
ATOM 6 C5' A B1649 63.157 160.148 74.225 1.00 33.93 C
ATOM 7 C4' A B1649 63.697 161.108 75.259 1.00 34.71 C
ATOM 8 O4' A B1649 63.100 162.420 75.059 1.00 34.96 O
ATOM 9 C3' A B1649 63.394 160.747 76.707 1.00 33.46 C
ATOM 10 O3' A B1649 64.409 161.317 77.507 1.00 34.90 O
ATOM 11 C2' A B1649 62.109 161.510 76.974 1.00 32.58 C
ATOM 12 O2' A B1649 61.942 161.753 78.352 1.00 33.20 O
ATOM 13 C1' A B1649 62.388 162.806 76.216 1.00 33.04 C
ATOM 14 N9 A B1649 61.201 163.543 75.787 1.00 33.46 N
ATOM 15 C8 A B1649 60.374 163.251 74.740 1.00 33.79 C
ATOM 16 N7 A B1649 59.397 164.107 74.582 1.00 35.96 N
ATOM 17 C5 A B1649 59.590 165.024 75.599 1.00 35.36 C
ATOM 18 C6 A B1649 58.881 166.176 75.976 1.00 37.07 C
ATOM 19 N6 A B1649 57.802 166.629 75.330 1.00 34.08 N
ATOM 20 N1 A B1649 59.326 166.859 77.052 1.00 38.88 N
ATOM 21 C2 A B1649 60.421 166.413 77.686 1.00 39.30 C
ATOM 22 N3 A B1649 61.177 165.351 77.417 1.00 37.31 N
ATOM 23 C4 A B1649 60.698 164.688 76.352 1.00 35.28 C
ATOM 24 P C B1650 65.592 160.402 78.059 1.00 35.80 P
ATOM 25 OP1 C B1650 66.543 161.319 78.721 1.00 36.26 O
ATOM 26 OP2 C B1650 66.058 159.530 76.948 1.00 33.67 O
ATOM 27 O5' C B1650 64.896 159.568 79.225 1.00 35.86 O
TER
ATOM 2 P C A1390 58.598 163.449 79.669 1.00 40.45 P
ATOM 3 OP1 C A1390 59.159 164.569 80.478 1.00 37.56 O
ATOM 4 OP2 C A1390 59.504 162.575 78.879 1.00 36.33 O
ATOM 5 O5' C A1390 57.700 162.549 80.627 1.00 37.42 O
ATOM 6 C5' C A1390 57.005 163.138 81.725 1.00 36.15 C
ATOM 7 C4' C A1390 55.914 162.225 82.206 1.00 35.93 C
ATOM 8 O4' C A1390 56.481 160.976 82.703 1.00 35.46 O
ATOM 9 C3' C A1390 55.087 162.798 83.350 1.00 36.07 C
ATOM 10 O3' C A1390 53.756 162.343 83.203 1.00 38.44 O
ATOM 11 C2' C A1390 55.707 162.140 84.573 1.00 35.27 C
ATOM 12 O2' C A1390 54.818 162.041 85.663 1.00 37.52 O
ATOM 13 C1' C A1390 56.031 160.755 84.025 1.00 35.34 C
ATOM 14 N1 C A1390 57.072 160.038 84.783 1.00 36.22 N
ATOM 15 C2 C A1390 56.768 158.779 85.330 1.00 35.28 C
ATOM 16 O2 C A1390 55.644 158.294 85.148 1.00 35.19 O
ATOM 17 N3 C A1390 57.710 158.126 86.042 1.00 34.72 N
ATOM 18 C4 C A1390 58.912 158.672 86.217 1.00 34.20 C
ATOM 19 N4 C A1390 59.807 157.989 86.926 1.00 34.88 N
ATOM 20 C5 C A1390 59.251 159.944 85.672 1.00 35.14 C
ATOM 21 C6 C A1390 58.313 160.585 84.967 1.00 35.38 C
ATOM 22 P U A1391 52.715 163.199 82.340 1.00 39.00 P
ATOM 23 OP1 U A1391 51.861 162.202 81.644 1.00 40.94 O
ATOM 24 OP2 U A1391 53.457 164.212 81.540 1.00 37.14 O
ATOM 25 O5' U A1391 51.842 163.946 83.442 1.00 34.01 O
TER
ATOM 1 O3' C B1648 61.095 157.603 74.564 1.00 37.63 O
ATOM 2 P A B1649 60.892 158.904 73.642 1.00 39.37 P
ATOM 3 OP1 A B1649 59.460 159.281 73.802 1.00 39.56 O
ATOM 4 OP2 A B1649 61.452 158.672 72.279 1.00 40.23 O
ATOM 5 O5' A B1649 61.732 160.045 74.367 1.00 38.50 O
ATOM 6 C5' A B1649 63.157 160.148 74.225 1.00 33.93 C
ATOM 7 C4' A B1649 63.697 161.108 75.259 1.00 34.71 C
ATOM 8 O4' A B1649 63.100 162.420 75.059 1.00 34.96 O
ATOM 9 C3' A B1649 63.394 160.747 76.707 1.00 33.46 C
ATOM 10 O3' A B1649 64.409 161.317 77.507 1.00 34.90 O
ATOM 11 C2' A B1649 62.109 161.510 76.974 1.00 32.58 C
ATOM 12 O2' A B1649 61.942 161.753 78.352 1.00 33.20 O
ATOM 13 C1' A B1649 62.388 162.806 76.216 1.00 33.04 C
ATOM 14 N9 A B1649 61.201 163.543 75.787 1.00 33.46 N
ATOM 15 C8 A B1649 60.374 163.251 74.740 1.00 33.79 C
ATOM 16 N7 A B1649 59.397 164.107 74.582 1.00 35.96 N
ATOM 17 C5 A B1649 59.590 165.024 75.599 1.00 35.36 C
ATOM 18 C6 A B1649 58.881 166.176 75.976 1.00 37.07 C
ATOM 19 N6 A B1649 57.802 166.629 75.330 1.00 34.08 N
ATOM 20 N1 A B1649 59.326 166.859 77.052 1.00 38.88 N
ATOM 21 C2 A B1649 60.421 166.413 77.686 1.00 39.30 C
ATOM 22 N3 A B1649 61.177 165.351 77.417 1.00 37.31 N
ATOM 23 C4 A B1649 60.698 164.688 76.352 1.00 35.28 C
ATOM 24 P C B1650 65.592 160.402 78.059 1.00 35.80 P
ATOM 25 OP1 C B1650 66.543 161.319 78.721 1.00 36.26 O
ATOM 26 OP2 C B1650 66.058 159.530 76.948 1.00 33.67 O
ATOM 27 O5' C B1650 64.896 159.568 79.225 1.00 35.86 O
TER
Atoms:
C2: (56.768,158.779,85.330)
OP1: (59.159,164.569,80.478)
OP2: (59.504,162.575,78.879)
C4: (58.912,158.672,86.217)
O5': (57.700,162.549,80.627)
C3': (55.087,162.798,83.350)
C1': (56.031,160.755,84.025)
O4': (56.481,160.976,82.703)
C5': (57.005,163.138,81.725)
P: (58.598,163.449,79.669)
O2: (55.644,158.294,85.148)
C4': (55.914,162.225,82.206)
C2': (55.707,162.140,84.573)
O2': (54.818,162.041,85.663)
N1: (57.072,160.038,84.783)
N3: (57.710,158.126,86.042)
N4: (59.807,157.989,86.926)
C6: (58.313,160.585,84.967)
C5: (59.251,159.944,85.672)
O3': (53.756,162.343,83.203)
OP1: (59.159,164.569,80.478)
OP2: (59.504,162.575,78.879)
C4: (58.912,158.672,86.217)
O5': (57.700,162.549,80.627)
C3': (55.087,162.798,83.350)
C1': (56.031,160.755,84.025)
O4': (56.481,160.976,82.703)
C5': (57.005,163.138,81.725)
P: (58.598,163.449,79.669)
O2: (55.644,158.294,85.148)
C4': (55.914,162.225,82.206)
C2': (55.707,162.140,84.573)
O2': (54.818,162.041,85.663)
N1: (57.072,160.038,84.783)
N3: (57.710,158.126,86.042)
N4: (59.807,157.989,86.926)
C6: (58.313,160.585,84.967)
C5: (59.251,159.944,85.672)
O3': (53.756,162.343,83.203)
OP1: (59.460,159.281,73.802)
OP2: (61.452,158.672,72.279)
C3': (63.394,160.747,76.707)
C1': (62.388,162.806,76.216)
C5': (63.157,160.148,74.225)
O4': (63.100,162.420,75.059)
C8: (60.374,163.251,74.740)
O2': (61.942,161.753,78.352)
C6: (58.881,166.176,75.976)
C5: (59.590,165.024,75.599)
C4: (60.698,164.688,76.352)
P: (60.892,158.904,73.642)
C4': (63.697,161.108,75.259)
C2': (62.109,161.510,76.974)
C2: (60.421,166.413,77.686)
N1: (59.326,166.859,77.052)
N3: (61.177,165.351,77.417)
N6: (57.802,166.629,75.330)
N7: (59.397,164.107,74.582)
N9: (61.201,163.543,75.787)
O5': (61.732,160.045,74.367)
O3': (64.409,161.317,77.507)
OP2: (61.452,158.672,72.279)
C3': (63.394,160.747,76.707)
C1': (62.388,162.806,76.216)
C5': (63.157,160.148,74.225)
O4': (63.100,162.420,75.059)
C8: (60.374,163.251,74.740)
O2': (61.942,161.753,78.352)
C6: (58.881,166.176,75.976)
C5: (59.590,165.024,75.599)
C4: (60.698,164.688,76.352)
P: (60.892,158.904,73.642)
C4': (63.697,161.108,75.259)
C2': (62.109,161.510,76.974)
C2: (60.421,166.413,77.686)
N1: (59.326,166.859,77.052)
N3: (61.177,165.351,77.417)
N6: (57.802,166.629,75.330)
N7: (59.397,164.107,74.582)
N9: (61.201,163.543,75.787)
O5': (61.732,160.045,74.367)
O3': (64.409,161.317,77.507)
Image (generated by PyMOL):