Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01390:01649
Extra
PDB:
ATOM 1 O3' G A1389 57.550 164.186 78.735 1.00 41.80 O
ATOM 2 P C A1390 58.617 163.415 79.647 1.00 42.98 P
ATOM 3 OP1 C A1390 59.317 164.458 80.442 1.00 41.82 O
ATOM 4 OP2 C A1390 59.394 162.498 78.778 1.00 42.32 O
ATOM 5 O5' C A1390 57.740 162.524 80.627 1.00 40.98 O
ATOM 6 C5' C A1390 57.052 163.115 81.730 1.00 40.36 C
ATOM 7 C4' C A1390 55.963 162.200 82.209 1.00 39.26 C
ATOM 8 O4' C A1390 56.542 160.958 82.694 1.00 38.92 O
ATOM 9 C3' C A1390 55.125 162.754 83.352 1.00 40.24 C
ATOM 10 O3' C A1390 53.791 162.318 83.172 1.00 42.94 O
ATOM 11 C2' C A1390 55.744 162.093 84.575 1.00 40.05 C
ATOM 12 O2' C A1390 54.856 161.966 85.667 1.00 41.00 O
ATOM 13 C1' C A1390 56.111 160.723 84.016 1.00 39.89 C
ATOM 14 N1 C A1390 57.191 160.061 84.766 1.00 40.86 N
ATOM 15 C2 C A1390 56.946 158.811 85.340 1.00 41.21 C
ATOM 16 O2 C A1390 55.846 158.276 85.174 1.00 40.94 O
ATOM 17 N3 C A1390 57.912 158.217 86.062 1.00 42.15 N
ATOM 18 C4 C A1390 59.091 158.817 86.220 1.00 43.52 C
ATOM 19 N4 C A1390 60.021 158.194 86.958 1.00 45.33 N
ATOM 20 C5 C A1390 59.374 160.081 85.633 1.00 42.87 C
ATOM 21 C6 C A1390 58.407 160.659 84.919 1.00 41.01 C
ATOM 22 P U A1391 52.777 163.212 82.311 1.00 44.38 P
ATOM 23 OP1 U A1391 51.888 162.273 81.574 1.00 42.95 O
ATOM 24 OP2 U A1391 53.577 164.210 81.552 1.00 43.78 O
ATOM 25 O5' U A1391 51.913 163.969 83.412 1.00 41.93 O
TER
ATOM 1 O3' C B1648 61.272 157.685 74.536 1.00 41.42 O
ATOM 2 P A B1649 61.015 158.945 73.568 1.00 42.49 P
ATOM 3 OP1 A B1649 59.571 159.267 73.694 1.00 41.97 O
ATOM 4 OP2 A B1649 61.606 158.704 72.214 1.00 41.71 O
ATOM 5 O5' A B1649 61.819 160.129 74.259 1.00 41.69 O
ATOM 6 C5' A B1649 63.249 160.175 74.215 1.00 39.85 C
ATOM 7 C4' A B1649 63.757 161.134 75.257 1.00 38.70 C
ATOM 8 O4' A B1649 63.148 162.428 75.018 1.00 37.28 O
ATOM 9 C3' A B1649 63.430 160.781 76.703 1.00 37.23 C
ATOM 10 O3' A B1649 64.447 161.325 77.528 1.00 37.53 O
ATOM 11 C2' A B1649 62.150 161.565 76.947 1.00 38.18 C
ATOM 12 O2' A B1649 61.974 161.843 78.321 1.00 39.72 O
ATOM 13 C1' A B1649 62.440 162.840 76.160 1.00 37.91 C
ATOM 14 N9 A B1649 61.270 163.585 75.712 1.00 38.98 N
ATOM 15 C8 A B1649 60.464 163.314 74.640 1.00 41.01 C
ATOM 16 N7 A B1649 59.485 164.170 74.483 1.00 42.64 N
ATOM 17 C5 A B1649 59.658 165.067 75.525 1.00 42.14 C
ATOM 18 C6 A B1649 58.938 166.206 75.919 1.00 42.80 C
ATOM 19 N6 A B1649 57.859 166.659 75.277 1.00 43.23 N
ATOM 20 N1 A B1649 59.369 166.873 77.007 1.00 43.68 N
ATOM 21 C2 A B1649 60.459 166.422 77.645 1.00 44.28 C
ATOM 22 N3 A B1649 61.221 165.367 77.370 1.00 42.58 N
ATOM 23 C4 A B1649 60.757 164.721 76.288 1.00 41.37 C
ATOM 24 P C B1650 65.741 160.454 77.885 1.00 38.60 P
ATOM 25 OP1 C B1650 66.809 161.397 78.266 1.00 41.31 O
ATOM 26 OP2 C B1650 65.989 159.482 76.799 1.00 38.66 O
ATOM 27 O5' C B1650 65.310 159.702 79.213 1.00 38.17 O
TER
ATOM 2 P C A1390 58.617 163.415 79.647 1.00 42.98 P
ATOM 3 OP1 C A1390 59.317 164.458 80.442 1.00 41.82 O
ATOM 4 OP2 C A1390 59.394 162.498 78.778 1.00 42.32 O
ATOM 5 O5' C A1390 57.740 162.524 80.627 1.00 40.98 O
ATOM 6 C5' C A1390 57.052 163.115 81.730 1.00 40.36 C
ATOM 7 C4' C A1390 55.963 162.200 82.209 1.00 39.26 C
ATOM 8 O4' C A1390 56.542 160.958 82.694 1.00 38.92 O
ATOM 9 C3' C A1390 55.125 162.754 83.352 1.00 40.24 C
ATOM 10 O3' C A1390 53.791 162.318 83.172 1.00 42.94 O
ATOM 11 C2' C A1390 55.744 162.093 84.575 1.00 40.05 C
ATOM 12 O2' C A1390 54.856 161.966 85.667 1.00 41.00 O
ATOM 13 C1' C A1390 56.111 160.723 84.016 1.00 39.89 C
ATOM 14 N1 C A1390 57.191 160.061 84.766 1.00 40.86 N
ATOM 15 C2 C A1390 56.946 158.811 85.340 1.00 41.21 C
ATOM 16 O2 C A1390 55.846 158.276 85.174 1.00 40.94 O
ATOM 17 N3 C A1390 57.912 158.217 86.062 1.00 42.15 N
ATOM 18 C4 C A1390 59.091 158.817 86.220 1.00 43.52 C
ATOM 19 N4 C A1390 60.021 158.194 86.958 1.00 45.33 N
ATOM 20 C5 C A1390 59.374 160.081 85.633 1.00 42.87 C
ATOM 21 C6 C A1390 58.407 160.659 84.919 1.00 41.01 C
ATOM 22 P U A1391 52.777 163.212 82.311 1.00 44.38 P
ATOM 23 OP1 U A1391 51.888 162.273 81.574 1.00 42.95 O
ATOM 24 OP2 U A1391 53.577 164.210 81.552 1.00 43.78 O
ATOM 25 O5' U A1391 51.913 163.969 83.412 1.00 41.93 O
TER
ATOM 1 O3' C B1648 61.272 157.685 74.536 1.00 41.42 O
ATOM 2 P A B1649 61.015 158.945 73.568 1.00 42.49 P
ATOM 3 OP1 A B1649 59.571 159.267 73.694 1.00 41.97 O
ATOM 4 OP2 A B1649 61.606 158.704 72.214 1.00 41.71 O
ATOM 5 O5' A B1649 61.819 160.129 74.259 1.00 41.69 O
ATOM 6 C5' A B1649 63.249 160.175 74.215 1.00 39.85 C
ATOM 7 C4' A B1649 63.757 161.134 75.257 1.00 38.70 C
ATOM 8 O4' A B1649 63.148 162.428 75.018 1.00 37.28 O
ATOM 9 C3' A B1649 63.430 160.781 76.703 1.00 37.23 C
ATOM 10 O3' A B1649 64.447 161.325 77.528 1.00 37.53 O
ATOM 11 C2' A B1649 62.150 161.565 76.947 1.00 38.18 C
ATOM 12 O2' A B1649 61.974 161.843 78.321 1.00 39.72 O
ATOM 13 C1' A B1649 62.440 162.840 76.160 1.00 37.91 C
ATOM 14 N9 A B1649 61.270 163.585 75.712 1.00 38.98 N
ATOM 15 C8 A B1649 60.464 163.314 74.640 1.00 41.01 C
ATOM 16 N7 A B1649 59.485 164.170 74.483 1.00 42.64 N
ATOM 17 C5 A B1649 59.658 165.067 75.525 1.00 42.14 C
ATOM 18 C6 A B1649 58.938 166.206 75.919 1.00 42.80 C
ATOM 19 N6 A B1649 57.859 166.659 75.277 1.00 43.23 N
ATOM 20 N1 A B1649 59.369 166.873 77.007 1.00 43.68 N
ATOM 21 C2 A B1649 60.459 166.422 77.645 1.00 44.28 C
ATOM 22 N3 A B1649 61.221 165.367 77.370 1.00 42.58 N
ATOM 23 C4 A B1649 60.757 164.721 76.288 1.00 41.37 C
ATOM 24 P C B1650 65.741 160.454 77.885 1.00 38.60 P
ATOM 25 OP1 C B1650 66.809 161.397 78.266 1.00 41.31 O
ATOM 26 OP2 C B1650 65.989 159.482 76.799 1.00 38.66 O
ATOM 27 O5' C B1650 65.310 159.702 79.213 1.00 38.17 O
TER
Atoms:
C2: (56.946,158.811,85.340)
OP1: (59.317,164.458,80.442)
OP2: (59.394,162.498,78.778)
C4: (59.091,158.817,86.220)
O5': (57.740,162.524,80.627)
C3': (55.125,162.754,83.352)
C1': (56.111,160.723,84.016)
O4': (56.542,160.958,82.694)
C5': (57.052,163.115,81.730)
P: (58.617,163.415,79.647)
O2: (55.846,158.276,85.174)
C4': (55.963,162.200,82.209)
C2': (55.744,162.093,84.575)
O2': (54.856,161.966,85.667)
N1: (57.191,160.061,84.766)
N3: (57.912,158.217,86.062)
N4: (60.021,158.194,86.958)
C6: (58.407,160.659,84.919)
C5: (59.374,160.081,85.633)
O3': (53.791,162.318,83.172)
OP1: (59.317,164.458,80.442)
OP2: (59.394,162.498,78.778)
C4: (59.091,158.817,86.220)
O5': (57.740,162.524,80.627)
C3': (55.125,162.754,83.352)
C1': (56.111,160.723,84.016)
O4': (56.542,160.958,82.694)
C5': (57.052,163.115,81.730)
P: (58.617,163.415,79.647)
O2: (55.846,158.276,85.174)
C4': (55.963,162.200,82.209)
C2': (55.744,162.093,84.575)
O2': (54.856,161.966,85.667)
N1: (57.191,160.061,84.766)
N3: (57.912,158.217,86.062)
N4: (60.021,158.194,86.958)
C6: (58.407,160.659,84.919)
C5: (59.374,160.081,85.633)
O3': (53.791,162.318,83.172)
OP1: (59.571,159.267,73.694)
OP2: (61.606,158.704,72.214)
C3': (63.430,160.781,76.703)
C1': (62.440,162.840,76.160)
C5': (63.249,160.175,74.215)
O4': (63.148,162.428,75.018)
C8: (60.464,163.314,74.640)
O2': (61.974,161.843,78.321)
C6: (58.938,166.206,75.919)
C5: (59.658,165.067,75.525)
C4: (60.757,164.721,76.288)
P: (61.015,158.945,73.568)
C4': (63.757,161.134,75.257)
C2': (62.150,161.565,76.947)
C2: (60.459,166.422,77.645)
N1: (59.369,166.873,77.007)
N3: (61.221,165.367,77.370)
N6: (57.859,166.659,75.277)
N7: (59.485,164.170,74.483)
N9: (61.270,163.585,75.712)
O5': (61.819,160.129,74.259)
O3': (64.447,161.325,77.528)
OP2: (61.606,158.704,72.214)
C3': (63.430,160.781,76.703)
C1': (62.440,162.840,76.160)
C5': (63.249,160.175,74.215)
O4': (63.148,162.428,75.018)
C8: (60.464,163.314,74.640)
O2': (61.974,161.843,78.321)
C6: (58.938,166.206,75.919)
C5: (59.658,165.067,75.525)
C4: (60.757,164.721,76.288)
P: (61.015,158.945,73.568)
C4': (63.757,161.134,75.257)
C2': (62.150,161.565,76.947)
C2: (60.459,166.422,77.645)
N1: (59.369,166.873,77.007)
N3: (61.221,165.367,77.370)
N6: (57.859,166.659,75.277)
N7: (59.485,164.170,74.483)
N9: (61.270,163.585,75.712)
O5': (61.819,160.129,74.259)
O3': (64.447,161.325,77.528)
Image (generated by PyMOL):