Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A1318:A1609
Extra
PDB:
ATOM 1 O3' G A1317 -2.936 124.011 185.274 1.00 0.86 O
ATOM 2 P U A1318 -3.669 123.373 183.988 1.00 9.16 P
ATOM 3 OP1 U A1318 -3.171 121.977 183.845 1.00 9.16 O
ATOM 4 OP2 U A1318 -3.471 124.321 182.860 1.00 9.16 O
ATOM 5 O5' U A1318 -5.188 123.340 184.419 1.00 9.16 O
ATOM 6 C5' U A1318 -5.687 122.233 185.140 1.00 9.16 C
ATOM 7 C4' U A1318 -6.732 122.648 186.126 1.00 9.16 C
ATOM 8 O4' U A1318 -7.965 122.894 185.400 1.00 9.16 O
ATOM 9 C3' U A1318 -7.077 121.583 187.182 1.00 9.16 C
ATOM 10 O3' U A1318 -7.642 122.202 188.347 1.00 9.16 O
ATOM 11 C2' U A1318 -8.174 120.847 186.477 1.00 9.16 C
ATOM 12 O2' U A1318 -8.978 120.047 187.307 1.00 9.16 O
ATOM 13 C1' U A1318 -8.941 122.029 185.913 1.00 9.16 C
ATOM 14 N1 U A1318 -9.871 121.662 184.879 1.00 9.34 N
ATOM 15 C2 U A1318 -11.087 121.689 185.460 1.00 9.34 C
ATOM 16 O2 U A1318 -11.166 122.079 186.633 1.00 9.34 O
ATOM 17 N3 U A1318 -12.100 121.288 184.630 1.00 9.34 N
ATOM 18 C4 U A1318 -11.927 120.855 183.343 1.00 9.34 C
ATOM 19 O4 U A1318 -12.915 120.526 182.735 1.00 9.34 O
ATOM 20 C5 U A1318 -10.604 120.819 182.823 1.00 9.34 C
ATOM 21 C6 U A1318 -9.616 121.203 183.622 1.00 9.34 C
ATOM 22 P U A1319 -6.762 122.512 189.658 1.00 8.03 P
ATOM 23 OP1 U A1319 -7.543 123.459 190.493 1.00 8.03 O
ATOM 24 OP2 U A1319 -5.427 122.917 189.200 1.00 8.03 O
ATOM 25 O5' U A1319 -6.698 121.103 190.384 1.00 8.03 O
TER
ATOM 1 O3' C B1608 -5.304 129.238 179.800 1.00 1.02 O
ATOM 2 P A B1609 -3.773 129.200 180.272 1.00 4.61 P
ATOM 3 OP1 A B1609 -3.764 128.882 181.731 1.00 4.61 O
ATOM 4 OP2 A B1609 -3.146 130.461 179.804 1.00 4.61 O
ATOM 5 O5' A B1609 -3.204 127.972 179.464 1.00 4.61 O
ATOM 6 C5' A B1609 -2.232 128.139 178.457 1.00 4.61 C
ATOM 7 C4' A B1609 -1.538 126.850 178.238 1.00 4.61 C
ATOM 8 O4' A B1609 -0.568 126.676 179.307 1.00 4.61 O
ATOM 9 C3' A B1609 -2.460 125.647 178.319 1.00 4.61 C
ATOM 10 O3' A B1609 -1.948 124.596 177.500 1.00 4.61 O
ATOM 11 C2' A B1609 -2.348 125.267 179.798 1.00 4.61 C
ATOM 12 O2' A B1609 -2.720 123.938 180.109 1.00 4.61 O
ATOM 13 C1' A B1609 -0.869 125.513 180.040 1.00 4.61 C
ATOM 14 N9 A B1609 -0.501 125.734 181.441 1.00 4.43 N
ATOM 15 C8 A B1609 -0.220 126.894 182.108 1.00 4.43 C
ATOM 16 N7 A B1609 0.107 126.742 183.383 1.00 4.43 N
ATOM 17 C5 A B1609 0.063 125.374 183.559 1.00 4.43 C
ATOM 18 C6 A B1609 0.296 124.543 184.687 1.00 4.43 C
ATOM 19 N6 A B1609 0.650 124.950 185.911 1.00 4.43 N
ATOM 20 N1 A B1609 0.145 123.212 184.513 1.00 4.43 N
ATOM 21 C2 A B1609 -0.207 122.783 183.278 1.00 4.43 C
ATOM 22 N3 A B1609 -0.454 123.474 182.150 1.00 4.43 N
ATOM 23 C4 A B1609 -0.301 124.769 182.366 1.00 4.43 C
ATOM 24 P C B1610 -2.520 124.342 176.006 1.00 0.01 P
ATOM 25 OP1 C B1610 -2.384 122.877 175.751 1.00 0.01 O
ATOM 26 OP2 C B1610 -1.829 125.295 175.096 1.00 0.01 O
ATOM 27 O5' C B1610 -4.055 124.738 176.106 1.00 0.01 O
TER
ATOM 2 P U A1318 -3.669 123.373 183.988 1.00 9.16 P
ATOM 3 OP1 U A1318 -3.171 121.977 183.845 1.00 9.16 O
ATOM 4 OP2 U A1318 -3.471 124.321 182.860 1.00 9.16 O
ATOM 5 O5' U A1318 -5.188 123.340 184.419 1.00 9.16 O
ATOM 6 C5' U A1318 -5.687 122.233 185.140 1.00 9.16 C
ATOM 7 C4' U A1318 -6.732 122.648 186.126 1.00 9.16 C
ATOM 8 O4' U A1318 -7.965 122.894 185.400 1.00 9.16 O
ATOM 9 C3' U A1318 -7.077 121.583 187.182 1.00 9.16 C
ATOM 10 O3' U A1318 -7.642 122.202 188.347 1.00 9.16 O
ATOM 11 C2' U A1318 -8.174 120.847 186.477 1.00 9.16 C
ATOM 12 O2' U A1318 -8.978 120.047 187.307 1.00 9.16 O
ATOM 13 C1' U A1318 -8.941 122.029 185.913 1.00 9.16 C
ATOM 14 N1 U A1318 -9.871 121.662 184.879 1.00 9.34 N
ATOM 15 C2 U A1318 -11.087 121.689 185.460 1.00 9.34 C
ATOM 16 O2 U A1318 -11.166 122.079 186.633 1.00 9.34 O
ATOM 17 N3 U A1318 -12.100 121.288 184.630 1.00 9.34 N
ATOM 18 C4 U A1318 -11.927 120.855 183.343 1.00 9.34 C
ATOM 19 O4 U A1318 -12.915 120.526 182.735 1.00 9.34 O
ATOM 20 C5 U A1318 -10.604 120.819 182.823 1.00 9.34 C
ATOM 21 C6 U A1318 -9.616 121.203 183.622 1.00 9.34 C
ATOM 22 P U A1319 -6.762 122.512 189.658 1.00 8.03 P
ATOM 23 OP1 U A1319 -7.543 123.459 190.493 1.00 8.03 O
ATOM 24 OP2 U A1319 -5.427 122.917 189.200 1.00 8.03 O
ATOM 25 O5' U A1319 -6.698 121.103 190.384 1.00 8.03 O
TER
ATOM 1 O3' C B1608 -5.304 129.238 179.800 1.00 1.02 O
ATOM 2 P A B1609 -3.773 129.200 180.272 1.00 4.61 P
ATOM 3 OP1 A B1609 -3.764 128.882 181.731 1.00 4.61 O
ATOM 4 OP2 A B1609 -3.146 130.461 179.804 1.00 4.61 O
ATOM 5 O5' A B1609 -3.204 127.972 179.464 1.00 4.61 O
ATOM 6 C5' A B1609 -2.232 128.139 178.457 1.00 4.61 C
ATOM 7 C4' A B1609 -1.538 126.850 178.238 1.00 4.61 C
ATOM 8 O4' A B1609 -0.568 126.676 179.307 1.00 4.61 O
ATOM 9 C3' A B1609 -2.460 125.647 178.319 1.00 4.61 C
ATOM 10 O3' A B1609 -1.948 124.596 177.500 1.00 4.61 O
ATOM 11 C2' A B1609 -2.348 125.267 179.798 1.00 4.61 C
ATOM 12 O2' A B1609 -2.720 123.938 180.109 1.00 4.61 O
ATOM 13 C1' A B1609 -0.869 125.513 180.040 1.00 4.61 C
ATOM 14 N9 A B1609 -0.501 125.734 181.441 1.00 4.43 N
ATOM 15 C8 A B1609 -0.220 126.894 182.108 1.00 4.43 C
ATOM 16 N7 A B1609 0.107 126.742 183.383 1.00 4.43 N
ATOM 17 C5 A B1609 0.063 125.374 183.559 1.00 4.43 C
ATOM 18 C6 A B1609 0.296 124.543 184.687 1.00 4.43 C
ATOM 19 N6 A B1609 0.650 124.950 185.911 1.00 4.43 N
ATOM 20 N1 A B1609 0.145 123.212 184.513 1.00 4.43 N
ATOM 21 C2 A B1609 -0.207 122.783 183.278 1.00 4.43 C
ATOM 22 N3 A B1609 -0.454 123.474 182.150 1.00 4.43 N
ATOM 23 C4 A B1609 -0.301 124.769 182.366 1.00 4.43 C
ATOM 24 P C B1610 -2.520 124.342 176.006 1.00 0.01 P
ATOM 25 OP1 C B1610 -2.384 122.877 175.751 1.00 0.01 O
ATOM 26 OP2 C B1610 -1.829 125.295 175.096 1.00 0.01 O
ATOM 27 O5' C B1610 -4.055 124.738 176.106 1.00 0.01 O
TER
Atoms:
C4: (-11.927,120.855,183.343)
N3: (-12.100,121.288,184.630)
OP1: (-3.171,121.977,183.845)
OP2: (-3.471,124.321,182.860)
C2: (-11.087,121.689,185.460)
C1': (-8.941,122.029,185.913)
C3': (-7.077,121.583,187.182)
O5': (-5.188,123.340,184.419)
O4': (-7.965,122.894,185.400)
C5': (-5.687,122.233,185.140)
P: (-3.669,123.373,183.988)
C4': (-6.732,122.648,186.126)
C2': (-8.174,120.847,186.477)
O2': (-8.978,120.047,187.307)
N1: (-9.871,121.662,184.879)
O4: (-12.915,120.526,182.735)
O2: (-11.166,122.079,186.633)
C6: (-9.616,121.203,183.622)
C5: (-10.604,120.819,182.823)
O3': (-7.642,122.202,188.347)
N3: (-12.100,121.288,184.630)
OP1: (-3.171,121.977,183.845)
OP2: (-3.471,124.321,182.860)
C2: (-11.087,121.689,185.460)
C1': (-8.941,122.029,185.913)
C3': (-7.077,121.583,187.182)
O5': (-5.188,123.340,184.419)
O4': (-7.965,122.894,185.400)
C5': (-5.687,122.233,185.140)
P: (-3.669,123.373,183.988)
C4': (-6.732,122.648,186.126)
C2': (-8.174,120.847,186.477)
O2': (-8.978,120.047,187.307)
N1: (-9.871,121.662,184.879)
O4: (-12.915,120.526,182.735)
O2: (-11.166,122.079,186.633)
C6: (-9.616,121.203,183.622)
C5: (-10.604,120.819,182.823)
O3': (-7.642,122.202,188.347)
OP1: (-3.764,128.882,181.731)
OP2: (-3.146,130.461,179.804)
C3': (-2.460,125.647,178.319)
C1': (-0.869,125.513,180.040)
C5': (-2.232,128.139,178.457)
O4': (-0.568,126.676,179.307)
C8: (-0.220,126.894,182.108)
O2': (-2.720,123.938,180.109)
C6: (0.296,124.543,184.687)
C5: (0.063,125.374,183.559)
C4: (-0.301,124.769,182.366)
P: (-3.773,129.200,180.272)
C4': (-1.538,126.850,178.238)
C2': (-2.348,125.267,179.798)
C2: (-0.207,122.783,183.278)
N1: (0.145,123.212,184.513)
N3: (-0.454,123.474,182.150)
N6: (0.650,124.950,185.911)
N7: (0.107,126.742,183.383)
N9: (-0.501,125.734,181.441)
O5': (-3.204,127.972,179.464)
O3': (-1.948,124.596,177.500)
OP2: (-3.146,130.461,179.804)
C3': (-2.460,125.647,178.319)
C1': (-0.869,125.513,180.040)
C5': (-2.232,128.139,178.457)
O4': (-0.568,126.676,179.307)
C8: (-0.220,126.894,182.108)
O2': (-2.720,123.938,180.109)
C6: (0.296,124.543,184.687)
C5: (0.063,125.374,183.559)
C4: (-0.301,124.769,182.366)
P: (-3.773,129.200,180.272)
C4': (-1.538,126.850,178.238)
C2': (-2.348,125.267,179.798)
C2: (-0.207,122.783,183.278)
N1: (0.145,123.212,184.513)
N3: (-0.454,123.474,182.150)
N6: (0.650,124.950,185.911)
N7: (0.107,126.742,183.383)
N9: (-0.501,125.734,181.441)
O5': (-3.204,127.972,179.464)
O3': (-1.948,124.596,177.500)
Image (generated by PyMOL):