ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YI2:01087:02016

Extra

PDB:
ATOM 1 O3' C A1086 49.723 101.350 115.027 1.00 42.51 O
ATOM 2 P U A1087 48.555 101.024 116.086 1.00 44.28 P
ATOM 3 OP1 U A1087 49.169 101.027 117.433 1.00 42.65 O
ATOM 4 OP2 U A1087 47.823 99.810 115.613 1.00 41.83 O
ATOM 5 O5' U A1087 47.587 102.282 116.000 1.00 41.41 O
ATOM 6 C5' U A1087 48.063 103.583 116.339 1.00 40.99 C
ATOM 7 C4' U A1087 46.985 104.606 116.111 1.00 42.74 C
ATOM 8 O4' U A1087 46.715 104.702 114.683 1.00 44.29 O
ATOM 9 C3' U A1087 45.643 104.306 116.776 1.00 43.36 C
ATOM 10 O3' U A1087 45.071 105.513 117.238 1.00 43.92 O
ATOM 11 C2' U A1087 44.804 103.781 115.618 1.00 44.43 C
ATOM 12 O2' U A1087 43.421 103.973 115.816 1.00 45.28 O
ATOM 13 C1' U A1087 45.320 104.657 114.482 1.00 43.72 C
ATOM 14 N1 U A1087 45.042 104.201 113.111 1.00 42.61 N
ATOM 15 C2 U A1087 44.492 105.126 112.241 1.00 42.33 C
ATOM 16 O2 U A1087 44.237 106.274 112.567 1.00 43.98 O
ATOM 17 N3 U A1087 44.249 104.663 110.974 1.00 41.53 N
ATOM 18 C4 U A1087 44.489 103.397 110.494 1.00 41.52 C
ATOM 19 O4 U A1087 44.228 103.142 109.318 1.00 40.84 O
ATOM 20 C5 U A1087 45.055 102.490 111.451 1.00 42.93 C
ATOM 21 C6 U A1087 45.308 102.914 112.697 1.00 43.04 C
ATOM 22 P C A1088 45.117 105.854 118.803 1.00 48.63 P
ATOM 23 OP1 C A1088 44.548 107.223 118.993 1.00 46.54 O
ATOM 24 OP2 C A1088 46.497 105.557 119.279 1.00 46.92 O
ATOM 25 O5' C A1088 44.139 104.774 119.455 1.00 47.98 O
TER

ATOM 1 O3' U B2015 42.398 108.563 109.878 1.00 34.26 O
ATOM 2 P G B2016 43.616 107.870 109.084 1.00 34.34 P
ATOM 3 OP1 G B2016 43.265 106.433 108.961 1.00 35.95 O
ATOM 4 OP2 G B2016 44.899 108.257 109.720 1.00 35.36 O
ATOM 5 O5' G B2016 43.588 108.540 107.638 1.00 33.04 O
ATOM 6 C5' G B2016 42.476 108.363 106.740 1.00 29.79 C
ATOM 7 C4' G B2016 42.577 109.353 105.604 1.00 31.97 C
ATOM 8 O4' G B2016 42.534 110.706 106.142 1.00 33.28 O
ATOM 9 C3' G B2016 43.891 109.303 104.843 1.00 31.14 C
ATOM 10 O3' G B2016 43.882 108.270 103.867 1.00 31.29 O
ATOM 11 C2' G B2016 43.997 110.707 104.261 1.00 31.33 C
ATOM 12 O2' G B2016 43.216 110.922 103.111 1.00 32.02 O
ATOM 13 C1' G B2016 43.398 111.546 105.390 1.00 33.34 C
ATOM 14 N9 G B2016 44.407 112.126 106.277 1.00 34.48 N
ATOM 15 C8 G B2016 44.983 111.550 107.385 1.00 34.84 C
ATOM 16 N7 G B2016 45.875 112.318 107.956 1.00 34.85 N
ATOM 17 C5 G B2016 45.889 113.469 107.180 1.00 34.35 C
ATOM 18 C6 G B2016 46.671 114.642 107.296 1.00 35.48 C
ATOM 19 O6 G B2016 47.555 114.902 108.125 1.00 38.05 O
ATOM 20 N1 G B2016 46.353 115.566 106.305 1.00 34.61 N
ATOM 21 C2 G B2016 45.414 115.380 105.322 1.00 32.95 C
ATOM 22 N2 G B2016 45.239 116.392 104.464 1.00 32.36 N
ATOM 23 N3 G B2016 44.698 114.285 105.191 1.00 32.40 N
ATOM 24 C4 G B2016 44.982 113.375 106.147 1.00 34.24 C
ATOM 25 P C B2017 45.154 107.290 103.722 1.00 33.52 P
ATOM 26 OP1 C B2017 44.744 106.210 102.804 1.00 31.36 O
ATOM 27 OP2 C B2017 45.680 106.935 105.077 1.00 33.15 O
ATOM 28 O5' C B2017 46.244 108.195 102.988 1.00 32.46 O
TER

Atoms:
C4: (44.489,103.397,110.494)
N3: (44.249,104.663,110.974)
OP1: (49.169,101.027,117.433)
OP2: (47.823,99.810,115.613)
C2: (44.492,105.126,112.241)
C1': (45.320,104.657,114.482)
C3': (45.643,104.306,116.776)
O5': (47.587,102.282,116.000)
O4': (46.715,104.702,114.683)
C5': (48.063,103.583,116.339)
P: (48.555,101.024,116.086)
C4': (46.985,104.606,116.111)
C2': (44.804,103.781,115.618)
O2': (43.421,103.973,115.816)
N1: (45.042,104.201,113.111)
O4: (44.228,103.142,109.318)
O2: (44.237,106.274,112.567)
C6: (45.308,102.914,112.697)
C5: (45.055,102.490,111.451)
O3': (45.071,105.513,117.238)
OP1: (43.265,106.433,108.961)
OP2: (44.899,108.257,109.720)
C3': (43.891,109.303,104.843)
C1': (43.398,111.546,105.390)
C5': (42.476,108.363,106.740)
O6: (47.555,114.902,108.125)
O4': (42.534,110.706,106.142)
C8: (44.983,111.550,107.385)
C2: (45.414,115.380,105.322)
C6: (46.671,114.642,107.296)
C5: (45.889,113.469,107.180)
C4: (44.982,113.375,106.147)
P: (43.616,107.870,109.084)
C4': (42.577,109.353,105.604)
C2': (43.997,110.707,104.261)
O2': (43.216,110.922,103.111)
N1: (46.353,115.566,106.305)
N2: (45.239,116.392,104.464)
N3: (44.698,114.285,105.191)
N7: (45.875,112.318,107.956)
N9: (44.407,112.126,106.277)
O5': (43.588,108.540,107.638)
O3': (43.882,108.270,103.867)
Image (generated by PyMOL):
PyMOL image
show in jmol