Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:02678:02680
Extra
PDB:
ATOM 1 O3' A A2677 46.773 160.926 121.754 1.00 39.88 O
ATOM 2 P C A2678 48.105 160.448 120.992 1.00 38.96 P
ATOM 3 OP1 C A2678 48.274 159.002 121.287 1.00 38.15 O
ATOM 4 OP2 C A2678 49.202 161.395 121.315 1.00 40.02 O
ATOM 5 O5' C A2678 47.742 160.629 119.454 1.00 37.83 O
ATOM 6 C5' C A2678 46.627 159.934 118.880 1.00 38.11 C
ATOM 7 C4' C A2678 46.357 160.444 117.488 1.00 40.12 C
ATOM 8 O4' C A2678 46.012 161.855 117.537 1.00 39.45 O
ATOM 9 C3' C A2678 47.527 160.376 116.523 1.00 39.05 C
ATOM 10 O3' C A2678 47.629 159.076 115.954 1.00 38.32 O
ATOM 11 C2' C A2678 47.144 161.427 115.492 1.00 39.21 C
ATOM 12 O2' C A2678 46.171 160.949 114.597 1.00 40.11 O
ATOM 13 C1' C A2678 46.499 162.499 116.374 1.00 39.96 C
ATOM 14 N1 C A2678 47.439 163.554 116.784 1.00 41.64 N
ATOM 15 C2 C A2678 47.695 164.626 115.906 1.00 43.34 C
ATOM 16 O2 C A2678 47.126 164.661 114.797 1.00 45.27 O
ATOM 17 N3 C A2678 48.559 165.592 116.287 1.00 43.05 N
ATOM 18 C4 C A2678 49.162 165.519 117.474 1.00 42.51 C
ATOM 19 N4 C A2678 50.013 166.492 117.803 1.00 44.80 N
ATOM 20 C5 C A2678 48.922 164.447 118.377 1.00 43.08 C
ATOM 21 C6 C A2678 48.062 163.497 117.998 1.00 41.89 C
ATOM 22 P A A2679 48.962 158.643 115.163 1.00 42.53 P
ATOM 23 OP1 A A2679 49.001 157.156 115.175 1.00 41.68 O
ATOM 24 OP2 A A2679 50.111 159.406 115.709 1.00 42.11 O
ATOM 25 O5' A A2679 48.712 159.132 113.664 1.00 39.43 O
TER
ATOM 1 O3' A B2679 47.519 161.580 110.834 1.00 37.62 O
ATOM 2 P A B2680 45.951 161.834 111.085 1.00 39.58 P
ATOM 3 OP1 A B2680 45.770 163.310 111.035 1.00 40.19 O
ATOM 4 OP2 A B2680 45.505 161.079 112.281 1.00 36.15 O
ATOM 5 O5' A B2680 45.222 161.168 109.832 1.00 38.09 O
ATOM 6 C5' A B2680 45.243 161.780 108.536 1.00 33.81 C
ATOM 7 C4' A B2680 44.192 161.152 107.658 1.00 33.51 C
ATOM 8 O4' A B2680 44.473 159.739 107.524 1.00 35.12 O
ATOM 9 C3' A B2680 42.777 161.193 108.198 1.00 34.12 C
ATOM 10 O3' A B2680 42.171 162.432 107.872 1.00 36.51 O
ATOM 11 C2' A B2680 42.121 160.026 107.467 1.00 33.90 C
ATOM 12 O2' A B2680 41.782 160.300 106.123 1.00 33.22 O
ATOM 13 C1' A B2680 43.262 159.012 107.447 1.00 33.00 C
ATOM 14 N9 A B2680 43.229 158.074 108.563 1.00 32.72 N
ATOM 15 C8 A B2680 43.946 158.128 109.729 1.00 31.99 C
ATOM 16 N7 A B2680 43.725 157.118 110.530 1.00 35.00 N
ATOM 17 C5 A B2680 42.793 156.348 109.849 1.00 34.70 C
ATOM 18 C6 A B2680 42.163 155.135 110.158 1.00 34.87 C
ATOM 19 N6 A B2680 42.379 154.453 111.284 1.00 34.85 N
ATOM 20 N1 A B2680 41.289 154.636 109.259 1.00 34.94 N
ATOM 21 C2 A B2680 41.068 155.320 108.133 1.00 33.13 C
ATOM 22 N3 A B2680 41.598 156.465 107.729 1.00 34.30 N
ATOM 23 C4 A B2680 42.468 156.932 108.642 1.00 34.31 C
ATOM 24 P G B2681 41.426 163.289 109.004 1.00 39.51 P
ATOM 25 OP1 G B2681 40.653 164.293 108.233 1.00 39.28 O
ATOM 26 OP2 G B2681 42.416 163.747 110.013 1.00 38.16 O
ATOM 27 O5' G B2681 40.418 162.257 109.696 1.00 37.68 O
TER
ATOM 2 P C A2678 48.105 160.448 120.992 1.00 38.96 P
ATOM 3 OP1 C A2678 48.274 159.002 121.287 1.00 38.15 O
ATOM 4 OP2 C A2678 49.202 161.395 121.315 1.00 40.02 O
ATOM 5 O5' C A2678 47.742 160.629 119.454 1.00 37.83 O
ATOM 6 C5' C A2678 46.627 159.934 118.880 1.00 38.11 C
ATOM 7 C4' C A2678 46.357 160.444 117.488 1.00 40.12 C
ATOM 8 O4' C A2678 46.012 161.855 117.537 1.00 39.45 O
ATOM 9 C3' C A2678 47.527 160.376 116.523 1.00 39.05 C
ATOM 10 O3' C A2678 47.629 159.076 115.954 1.00 38.32 O
ATOM 11 C2' C A2678 47.144 161.427 115.492 1.00 39.21 C
ATOM 12 O2' C A2678 46.171 160.949 114.597 1.00 40.11 O
ATOM 13 C1' C A2678 46.499 162.499 116.374 1.00 39.96 C
ATOM 14 N1 C A2678 47.439 163.554 116.784 1.00 41.64 N
ATOM 15 C2 C A2678 47.695 164.626 115.906 1.00 43.34 C
ATOM 16 O2 C A2678 47.126 164.661 114.797 1.00 45.27 O
ATOM 17 N3 C A2678 48.559 165.592 116.287 1.00 43.05 N
ATOM 18 C4 C A2678 49.162 165.519 117.474 1.00 42.51 C
ATOM 19 N4 C A2678 50.013 166.492 117.803 1.00 44.80 N
ATOM 20 C5 C A2678 48.922 164.447 118.377 1.00 43.08 C
ATOM 21 C6 C A2678 48.062 163.497 117.998 1.00 41.89 C
ATOM 22 P A A2679 48.962 158.643 115.163 1.00 42.53 P
ATOM 23 OP1 A A2679 49.001 157.156 115.175 1.00 41.68 O
ATOM 24 OP2 A A2679 50.111 159.406 115.709 1.00 42.11 O
ATOM 25 O5' A A2679 48.712 159.132 113.664 1.00 39.43 O
TER
ATOM 1 O3' A B2679 47.519 161.580 110.834 1.00 37.62 O
ATOM 2 P A B2680 45.951 161.834 111.085 1.00 39.58 P
ATOM 3 OP1 A B2680 45.770 163.310 111.035 1.00 40.19 O
ATOM 4 OP2 A B2680 45.505 161.079 112.281 1.00 36.15 O
ATOM 5 O5' A B2680 45.222 161.168 109.832 1.00 38.09 O
ATOM 6 C5' A B2680 45.243 161.780 108.536 1.00 33.81 C
ATOM 7 C4' A B2680 44.192 161.152 107.658 1.00 33.51 C
ATOM 8 O4' A B2680 44.473 159.739 107.524 1.00 35.12 O
ATOM 9 C3' A B2680 42.777 161.193 108.198 1.00 34.12 C
ATOM 10 O3' A B2680 42.171 162.432 107.872 1.00 36.51 O
ATOM 11 C2' A B2680 42.121 160.026 107.467 1.00 33.90 C
ATOM 12 O2' A B2680 41.782 160.300 106.123 1.00 33.22 O
ATOM 13 C1' A B2680 43.262 159.012 107.447 1.00 33.00 C
ATOM 14 N9 A B2680 43.229 158.074 108.563 1.00 32.72 N
ATOM 15 C8 A B2680 43.946 158.128 109.729 1.00 31.99 C
ATOM 16 N7 A B2680 43.725 157.118 110.530 1.00 35.00 N
ATOM 17 C5 A B2680 42.793 156.348 109.849 1.00 34.70 C
ATOM 18 C6 A B2680 42.163 155.135 110.158 1.00 34.87 C
ATOM 19 N6 A B2680 42.379 154.453 111.284 1.00 34.85 N
ATOM 20 N1 A B2680 41.289 154.636 109.259 1.00 34.94 N
ATOM 21 C2 A B2680 41.068 155.320 108.133 1.00 33.13 C
ATOM 22 N3 A B2680 41.598 156.465 107.729 1.00 34.30 N
ATOM 23 C4 A B2680 42.468 156.932 108.642 1.00 34.31 C
ATOM 24 P G B2681 41.426 163.289 109.004 1.00 39.51 P
ATOM 25 OP1 G B2681 40.653 164.293 108.233 1.00 39.28 O
ATOM 26 OP2 G B2681 42.416 163.747 110.013 1.00 38.16 O
ATOM 27 O5' G B2681 40.418 162.257 109.696 1.00 37.68 O
TER
Atoms:
C2: (47.695,164.626,115.906)
OP1: (48.274,159.002,121.287)
OP2: (49.202,161.395,121.315)
C4: (49.162,165.519,117.474)
O5': (47.742,160.629,119.454)
C3': (47.527,160.376,116.523)
C1': (46.499,162.499,116.374)
O4': (46.012,161.855,117.537)
C5': (46.627,159.934,118.880)
P: (48.105,160.448,120.992)
O2: (47.126,164.661,114.797)
C4': (46.357,160.444,117.488)
C2': (47.144,161.427,115.492)
O2': (46.171,160.949,114.597)
N1: (47.439,163.554,116.784)
N3: (48.559,165.592,116.287)
N4: (50.013,166.492,117.803)
C6: (48.062,163.497,117.998)
C5: (48.922,164.447,118.377)
O3': (47.629,159.076,115.954)
OP1: (48.274,159.002,121.287)
OP2: (49.202,161.395,121.315)
C4: (49.162,165.519,117.474)
O5': (47.742,160.629,119.454)
C3': (47.527,160.376,116.523)
C1': (46.499,162.499,116.374)
O4': (46.012,161.855,117.537)
C5': (46.627,159.934,118.880)
P: (48.105,160.448,120.992)
O2: (47.126,164.661,114.797)
C4': (46.357,160.444,117.488)
C2': (47.144,161.427,115.492)
O2': (46.171,160.949,114.597)
N1: (47.439,163.554,116.784)
N3: (48.559,165.592,116.287)
N4: (50.013,166.492,117.803)
C6: (48.062,163.497,117.998)
C5: (48.922,164.447,118.377)
O3': (47.629,159.076,115.954)
OP1: (45.770,163.310,111.035)
OP2: (45.505,161.079,112.281)
C3': (42.777,161.193,108.198)
C1': (43.262,159.012,107.447)
C5': (45.243,161.780,108.536)
O4': (44.473,159.739,107.524)
C8: (43.946,158.128,109.729)
O2': (41.782,160.300,106.123)
C6: (42.163,155.135,110.158)
C5: (42.793,156.348,109.849)
C4: (42.468,156.932,108.642)
P: (45.951,161.834,111.085)
C4': (44.192,161.152,107.658)
C2': (42.121,160.026,107.467)
C2: (41.068,155.320,108.133)
N1: (41.289,154.636,109.259)
N3: (41.598,156.465,107.729)
N6: (42.379,154.453,111.284)
N7: (43.725,157.118,110.530)
N9: (43.229,158.074,108.563)
O5': (45.222,161.168,109.832)
O3': (42.171,162.432,107.872)
OP2: (45.505,161.079,112.281)
C3': (42.777,161.193,108.198)
C1': (43.262,159.012,107.447)
C5': (45.243,161.780,108.536)
O4': (44.473,159.739,107.524)
C8: (43.946,158.128,109.729)
O2': (41.782,160.300,106.123)
C6: (42.163,155.135,110.158)
C5: (42.793,156.348,109.849)
C4: (42.468,156.932,108.642)
P: (45.951,161.834,111.085)
C4': (44.192,161.152,107.658)
C2': (42.121,160.026,107.467)
C2: (41.068,155.320,108.133)
N1: (41.289,154.636,109.259)
N3: (41.598,156.465,107.729)
N6: (42.379,154.453,111.284)
N7: (43.725,157.118,110.530)
N9: (43.229,158.074,108.563)
O5': (45.222,161.168,109.832)
O3': (42.171,162.432,107.872)
Image (generated by PyMOL):