Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:02678:02680
Extra
PDB:
ATOM 1 O3' A A2677 46.720 161.400 122.228 1.00 44.76 O
ATOM 2 P C A2678 48.045 160.902 121.476 1.00 44.25 P
ATOM 3 OP1 C A2678 48.224 159.463 121.782 1.00 43.62 O
ATOM 4 OP2 C A2678 49.133 161.857 121.770 1.00 45.97 O
ATOM 5 O5' C A2678 47.692 161.064 119.938 1.00 42.78 O
ATOM 6 C5' C A2678 46.657 160.285 119.347 1.00 43.09 C
ATOM 7 C4' C A2678 46.398 160.777 117.959 1.00 46.35 C
ATOM 8 O4' C A2678 46.059 162.189 118.028 1.00 46.50 O
ATOM 9 C3' C A2678 47.602 160.750 117.035 1.00 46.39 C
ATOM 10 O3' C A2678 47.807 159.464 116.469 1.00 46.30 O
ATOM 11 C2' C A2678 47.218 161.788 115.993 1.00 46.85 C
ATOM 12 O2' C A2678 46.284 161.292 115.061 1.00 47.76 O
ATOM 13 C1' C A2678 46.534 162.845 116.864 1.00 47.04 C
ATOM 14 N1 C A2678 47.456 163.916 117.264 1.00 47.89 N
ATOM 15 C2 C A2678 47.720 164.952 116.359 1.00 49.75 C
ATOM 16 O2 C A2678 47.152 164.951 115.253 1.00 52.22 O
ATOM 17 N3 C A2678 48.586 165.926 116.707 1.00 50.56 N
ATOM 18 C4 C A2678 49.176 165.897 117.901 1.00 49.73 C
ATOM 19 N4 C A2678 50.029 166.878 118.197 1.00 52.33 N
ATOM 20 C5 C A2678 48.918 164.864 118.845 1.00 49.38 C
ATOM 21 C6 C A2678 48.059 163.903 118.490 1.00 48.60 C
ATOM 22 P A A2679 49.158 159.162 115.652 1.00 50.09 P
ATOM 23 OP1 A A2679 49.363 157.694 115.607 1.00 50.49 O
ATOM 24 OP2 A A2679 50.219 160.028 116.221 1.00 49.56 O
ATOM 25 O5' A A2679 48.833 159.642 114.163 1.00 47.18 O
TER
ATOM 1 O3' A B2679 47.551 161.980 111.264 1.00 43.73 O
ATOM 2 P A B2680 45.976 162.183 111.526 1.00 45.55 P
ATOM 3 OP1 A B2680 45.730 163.650 111.530 1.00 45.41 O
ATOM 4 OP2 A B2680 45.598 161.379 112.714 1.00 43.45 O
ATOM 5 O5' A B2680 45.265 161.512 110.261 1.00 45.47 O
ATOM 6 C5' A B2680 45.317 162.113 108.948 1.00 43.94 C
ATOM 7 C4' A B2680 44.223 161.539 108.066 1.00 44.66 C
ATOM 8 O4' A B2680 44.429 160.114 107.888 1.00 45.17 O
ATOM 9 C3' A B2680 42.812 161.644 108.618 1.00 44.65 C
ATOM 10 O3' A B2680 42.256 162.906 108.295 1.00 45.78 O
ATOM 11 C2' A B2680 42.095 160.514 107.891 1.00 44.65 C
ATOM 12 O2' A B2680 41.792 160.831 106.550 1.00 45.15 O
ATOM 13 C1' A B2680 43.181 159.444 107.860 1.00 43.93 C
ATOM 14 N9 A B2680 43.145 158.513 108.986 1.00 43.73 N
ATOM 15 C8 A B2680 43.873 158.579 110.146 1.00 44.16 C
ATOM 16 N7 A B2680 43.686 157.559 110.944 1.00 44.87 N
ATOM 17 C5 A B2680 42.763 156.777 110.273 1.00 42.74 C
ATOM 18 C6 A B2680 42.173 155.552 110.585 1.00 43.77 C
ATOM 19 N6 A B2680 42.441 154.866 111.698 1.00 42.63 N
ATOM 20 N1 A B2680 41.288 155.042 109.704 1.00 44.42 N
ATOM 21 C2 A B2680 41.025 155.730 108.591 1.00 42.87 C
ATOM 22 N3 A B2680 41.521 156.889 108.185 1.00 43.00 N
ATOM 23 C4 A B2680 42.400 157.364 109.079 1.00 42.74 C
ATOM 24 P G B2681 41.468 163.748 109.408 1.00 47.87 P
ATOM 25 OP1 G B2681 40.672 164.695 108.601 1.00 50.05 O
ATOM 26 OP2 G B2681 42.425 164.273 110.420 1.00 46.28 O
ATOM 27 O5' G B2681 40.483 162.701 110.117 1.00 46.85 O
TER
ATOM 2 P C A2678 48.045 160.902 121.476 1.00 44.25 P
ATOM 3 OP1 C A2678 48.224 159.463 121.782 1.00 43.62 O
ATOM 4 OP2 C A2678 49.133 161.857 121.770 1.00 45.97 O
ATOM 5 O5' C A2678 47.692 161.064 119.938 1.00 42.78 O
ATOM 6 C5' C A2678 46.657 160.285 119.347 1.00 43.09 C
ATOM 7 C4' C A2678 46.398 160.777 117.959 1.00 46.35 C
ATOM 8 O4' C A2678 46.059 162.189 118.028 1.00 46.50 O
ATOM 9 C3' C A2678 47.602 160.750 117.035 1.00 46.39 C
ATOM 10 O3' C A2678 47.807 159.464 116.469 1.00 46.30 O
ATOM 11 C2' C A2678 47.218 161.788 115.993 1.00 46.85 C
ATOM 12 O2' C A2678 46.284 161.292 115.061 1.00 47.76 O
ATOM 13 C1' C A2678 46.534 162.845 116.864 1.00 47.04 C
ATOM 14 N1 C A2678 47.456 163.916 117.264 1.00 47.89 N
ATOM 15 C2 C A2678 47.720 164.952 116.359 1.00 49.75 C
ATOM 16 O2 C A2678 47.152 164.951 115.253 1.00 52.22 O
ATOM 17 N3 C A2678 48.586 165.926 116.707 1.00 50.56 N
ATOM 18 C4 C A2678 49.176 165.897 117.901 1.00 49.73 C
ATOM 19 N4 C A2678 50.029 166.878 118.197 1.00 52.33 N
ATOM 20 C5 C A2678 48.918 164.864 118.845 1.00 49.38 C
ATOM 21 C6 C A2678 48.059 163.903 118.490 1.00 48.60 C
ATOM 22 P A A2679 49.158 159.162 115.652 1.00 50.09 P
ATOM 23 OP1 A A2679 49.363 157.694 115.607 1.00 50.49 O
ATOM 24 OP2 A A2679 50.219 160.028 116.221 1.00 49.56 O
ATOM 25 O5' A A2679 48.833 159.642 114.163 1.00 47.18 O
TER
ATOM 1 O3' A B2679 47.551 161.980 111.264 1.00 43.73 O
ATOM 2 P A B2680 45.976 162.183 111.526 1.00 45.55 P
ATOM 3 OP1 A B2680 45.730 163.650 111.530 1.00 45.41 O
ATOM 4 OP2 A B2680 45.598 161.379 112.714 1.00 43.45 O
ATOM 5 O5' A B2680 45.265 161.512 110.261 1.00 45.47 O
ATOM 6 C5' A B2680 45.317 162.113 108.948 1.00 43.94 C
ATOM 7 C4' A B2680 44.223 161.539 108.066 1.00 44.66 C
ATOM 8 O4' A B2680 44.429 160.114 107.888 1.00 45.17 O
ATOM 9 C3' A B2680 42.812 161.644 108.618 1.00 44.65 C
ATOM 10 O3' A B2680 42.256 162.906 108.295 1.00 45.78 O
ATOM 11 C2' A B2680 42.095 160.514 107.891 1.00 44.65 C
ATOM 12 O2' A B2680 41.792 160.831 106.550 1.00 45.15 O
ATOM 13 C1' A B2680 43.181 159.444 107.860 1.00 43.93 C
ATOM 14 N9 A B2680 43.145 158.513 108.986 1.00 43.73 N
ATOM 15 C8 A B2680 43.873 158.579 110.146 1.00 44.16 C
ATOM 16 N7 A B2680 43.686 157.559 110.944 1.00 44.87 N
ATOM 17 C5 A B2680 42.763 156.777 110.273 1.00 42.74 C
ATOM 18 C6 A B2680 42.173 155.552 110.585 1.00 43.77 C
ATOM 19 N6 A B2680 42.441 154.866 111.698 1.00 42.63 N
ATOM 20 N1 A B2680 41.288 155.042 109.704 1.00 44.42 N
ATOM 21 C2 A B2680 41.025 155.730 108.591 1.00 42.87 C
ATOM 22 N3 A B2680 41.521 156.889 108.185 1.00 43.00 N
ATOM 23 C4 A B2680 42.400 157.364 109.079 1.00 42.74 C
ATOM 24 P G B2681 41.468 163.748 109.408 1.00 47.87 P
ATOM 25 OP1 G B2681 40.672 164.695 108.601 1.00 50.05 O
ATOM 26 OP2 G B2681 42.425 164.273 110.420 1.00 46.28 O
ATOM 27 O5' G B2681 40.483 162.701 110.117 1.00 46.85 O
TER
Atoms:
C2: (47.720,164.952,116.359)
OP1: (48.224,159.463,121.782)
OP2: (49.133,161.857,121.770)
C4: (49.176,165.897,117.901)
O5': (47.692,161.064,119.938)
C3': (47.602,160.750,117.035)
C1': (46.534,162.845,116.864)
O4': (46.059,162.189,118.028)
C5': (46.657,160.285,119.347)
P: (48.045,160.902,121.476)
O2: (47.152,164.951,115.253)
C4': (46.398,160.777,117.959)
C2': (47.218,161.788,115.993)
O2': (46.284,161.292,115.061)
N1: (47.456,163.916,117.264)
N3: (48.586,165.926,116.707)
N4: (50.029,166.878,118.197)
C6: (48.059,163.903,118.490)
C5: (48.918,164.864,118.845)
O3': (47.807,159.464,116.469)
OP1: (48.224,159.463,121.782)
OP2: (49.133,161.857,121.770)
C4: (49.176,165.897,117.901)
O5': (47.692,161.064,119.938)
C3': (47.602,160.750,117.035)
C1': (46.534,162.845,116.864)
O4': (46.059,162.189,118.028)
C5': (46.657,160.285,119.347)
P: (48.045,160.902,121.476)
O2: (47.152,164.951,115.253)
C4': (46.398,160.777,117.959)
C2': (47.218,161.788,115.993)
O2': (46.284,161.292,115.061)
N1: (47.456,163.916,117.264)
N3: (48.586,165.926,116.707)
N4: (50.029,166.878,118.197)
C6: (48.059,163.903,118.490)
C5: (48.918,164.864,118.845)
O3': (47.807,159.464,116.469)
OP1: (45.730,163.650,111.530)
OP2: (45.598,161.379,112.714)
C3': (42.812,161.644,108.618)
C1': (43.181,159.444,107.860)
C5': (45.317,162.113,108.948)
O4': (44.429,160.114,107.888)
C8: (43.873,158.579,110.146)
O2': (41.792,160.831,106.550)
C6: (42.173,155.552,110.585)
C5: (42.763,156.777,110.273)
C4: (42.400,157.364,109.079)
P: (45.976,162.183,111.526)
C4': (44.223,161.539,108.066)
C2': (42.095,160.514,107.891)
C2: (41.025,155.730,108.591)
N1: (41.288,155.042,109.704)
N3: (41.521,156.889,108.185)
N6: (42.441,154.866,111.698)
N7: (43.686,157.559,110.944)
N9: (43.145,158.513,108.986)
O5': (45.265,161.512,110.261)
O3': (42.256,162.906,108.295)
OP2: (45.598,161.379,112.714)
C3': (42.812,161.644,108.618)
C1': (43.181,159.444,107.860)
C5': (45.317,162.113,108.948)
O4': (44.429,160.114,107.888)
C8: (43.873,158.579,110.146)
O2': (41.792,160.831,106.550)
C6: (42.173,155.552,110.585)
C5: (42.763,156.777,110.273)
C4: (42.400,157.364,109.079)
P: (45.976,162.183,111.526)
C4': (44.223,161.539,108.066)
C2': (42.095,160.514,107.891)
C2: (41.025,155.730,108.591)
N1: (41.288,155.042,109.704)
N3: (41.521,156.889,108.185)
N6: (42.441,154.866,111.698)
N7: (43.686,157.559,110.944)
N9: (43.145,158.513,108.986)
O5': (45.265,161.512,110.261)
O3': (42.256,162.906,108.295)
Image (generated by PyMOL):