Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:02678:02680
Extra
PDB:
ATOM 1 O3' A A2677 46.613 161.241 121.806 1.00 44.93 O
ATOM 2 P C A2678 47.962 160.780 121.080 1.00 46.26 P
ATOM 3 OP1 C A2678 48.141 159.335 121.407 1.00 45.37 O
ATOM 4 OP2 C A2678 49.037 161.750 121.423 1.00 45.17 O
ATOM 5 O5' C A2678 47.630 160.945 119.532 1.00 42.75 O
ATOM 6 C5' C A2678 46.602 160.163 118.922 1.00 42.93 C
ATOM 7 C4' C A2678 46.317 160.675 117.540 1.00 44.22 C
ATOM 8 O4' C A2678 45.973 162.082 117.624 1.00 43.89 O
ATOM 9 C3' C A2678 47.481 160.631 116.568 1.00 44.84 C
ATOM 10 O3' C A2678 47.587 159.332 115.974 1.00 44.29 O
ATOM 11 C2' C A2678 47.085 161.705 115.563 1.00 46.23 C
ATOM 12 O2' C A2678 46.096 161.255 114.664 1.00 50.15 O
ATOM 13 C1' C A2678 46.442 162.754 116.472 1.00 45.46 C
ATOM 14 N1 C A2678 47.377 163.805 116.897 1.00 47.47 N
ATOM 15 C2 C A2678 47.630 164.890 116.032 1.00 48.30 C
ATOM 16 O2 C A2678 47.052 164.943 114.932 1.00 48.90 O
ATOM 17 N3 C A2678 48.501 165.851 116.423 1.00 48.25 N
ATOM 18 C4 C A2678 49.108 165.760 117.611 1.00 47.44 C
ATOM 19 N4 C A2678 49.966 166.722 117.951 1.00 49.17 N
ATOM 20 C5 C A2678 48.865 164.678 118.504 1.00 47.91 C
ATOM 21 C6 C A2678 48.001 163.732 118.112 1.00 48.12 C
ATOM 22 P A A2679 48.925 158.912 115.175 1.00 44.66 P
ATOM 23 OP1 A A2679 49.006 157.433 115.185 1.00 43.65 O
ATOM 24 OP2 A A2679 50.055 159.701 115.713 1.00 45.20 O
ATOM 25 O5' A A2679 48.647 159.380 113.676 1.00 42.52 O
TER
ATOM 1 O3' A B2679 47.334 161.839 110.874 1.00 41.88 O
ATOM 2 P A B2680 45.768 162.067 111.145 1.00 44.39 P
ATOM 3 OP1 A B2680 45.585 163.545 111.105 1.00 43.44 O
ATOM 4 OP2 A B2680 45.370 161.315 112.355 1.00 41.36 O
ATOM 5 O5' A B2680 45.036 161.381 109.903 1.00 41.48 O
ATOM 6 C5' A B2680 45.051 161.984 108.595 1.00 39.53 C
ATOM 7 C4' A B2680 44.015 161.334 107.705 1.00 39.18 C
ATOM 8 O4' A B2680 44.302 159.919 107.588 1.00 38.87 O
ATOM 9 C3' A B2680 42.585 161.368 108.210 1.00 40.15 C
ATOM 10 O3' A B2680 41.967 162.608 107.908 1.00 41.66 O
ATOM 11 C2' A B2680 41.955 160.201 107.460 1.00 39.77 C
ATOM 12 O2' A B2680 41.659 160.468 106.107 1.00 39.57 O
ATOM 13 C1' A B2680 43.095 159.189 107.485 1.00 38.78 C
ATOM 14 N9 A B2680 43.019 158.263 108.613 1.00 39.14 N
ATOM 15 C8 A B2680 43.642 158.350 109.832 1.00 39.06 C
ATOM 16 N7 A B2680 43.404 157.332 110.620 1.00 39.45 N
ATOM 17 C5 A B2680 42.560 156.523 109.873 1.00 40.29 C
ATOM 18 C6 A B2680 41.957 155.285 110.137 1.00 40.70 C
ATOM 19 N6 A B2680 42.119 154.610 111.275 1.00 41.03 N
ATOM 20 N1 A B2680 41.171 154.754 109.179 1.00 40.44 N
ATOM 21 C2 A B2680 41.009 155.427 108.037 1.00 39.09 C
ATOM 22 N3 A B2680 41.524 156.591 107.669 1.00 39.42 N
ATOM 23 C4 A B2680 42.302 157.093 108.642 1.00 39.72 C
ATOM 24 P G B2681 41.296 163.475 109.079 1.00 43.57 P
ATOM 25 OP1 G B2681 40.521 164.505 108.348 1.00 45.05 O
ATOM 26 OP2 G B2681 42.334 163.900 110.048 1.00 41.36 O
ATOM 27 O5' G B2681 40.296 162.463 109.804 1.00 42.50 O
TER
ATOM 2 P C A2678 47.962 160.780 121.080 1.00 46.26 P
ATOM 3 OP1 C A2678 48.141 159.335 121.407 1.00 45.37 O
ATOM 4 OP2 C A2678 49.037 161.750 121.423 1.00 45.17 O
ATOM 5 O5' C A2678 47.630 160.945 119.532 1.00 42.75 O
ATOM 6 C5' C A2678 46.602 160.163 118.922 1.00 42.93 C
ATOM 7 C4' C A2678 46.317 160.675 117.540 1.00 44.22 C
ATOM 8 O4' C A2678 45.973 162.082 117.624 1.00 43.89 O
ATOM 9 C3' C A2678 47.481 160.631 116.568 1.00 44.84 C
ATOM 10 O3' C A2678 47.587 159.332 115.974 1.00 44.29 O
ATOM 11 C2' C A2678 47.085 161.705 115.563 1.00 46.23 C
ATOM 12 O2' C A2678 46.096 161.255 114.664 1.00 50.15 O
ATOM 13 C1' C A2678 46.442 162.754 116.472 1.00 45.46 C
ATOM 14 N1 C A2678 47.377 163.805 116.897 1.00 47.47 N
ATOM 15 C2 C A2678 47.630 164.890 116.032 1.00 48.30 C
ATOM 16 O2 C A2678 47.052 164.943 114.932 1.00 48.90 O
ATOM 17 N3 C A2678 48.501 165.851 116.423 1.00 48.25 N
ATOM 18 C4 C A2678 49.108 165.760 117.611 1.00 47.44 C
ATOM 19 N4 C A2678 49.966 166.722 117.951 1.00 49.17 N
ATOM 20 C5 C A2678 48.865 164.678 118.504 1.00 47.91 C
ATOM 21 C6 C A2678 48.001 163.732 118.112 1.00 48.12 C
ATOM 22 P A A2679 48.925 158.912 115.175 1.00 44.66 P
ATOM 23 OP1 A A2679 49.006 157.433 115.185 1.00 43.65 O
ATOM 24 OP2 A A2679 50.055 159.701 115.713 1.00 45.20 O
ATOM 25 O5' A A2679 48.647 159.380 113.676 1.00 42.52 O
TER
ATOM 1 O3' A B2679 47.334 161.839 110.874 1.00 41.88 O
ATOM 2 P A B2680 45.768 162.067 111.145 1.00 44.39 P
ATOM 3 OP1 A B2680 45.585 163.545 111.105 1.00 43.44 O
ATOM 4 OP2 A B2680 45.370 161.315 112.355 1.00 41.36 O
ATOM 5 O5' A B2680 45.036 161.381 109.903 1.00 41.48 O
ATOM 6 C5' A B2680 45.051 161.984 108.595 1.00 39.53 C
ATOM 7 C4' A B2680 44.015 161.334 107.705 1.00 39.18 C
ATOM 8 O4' A B2680 44.302 159.919 107.588 1.00 38.87 O
ATOM 9 C3' A B2680 42.585 161.368 108.210 1.00 40.15 C
ATOM 10 O3' A B2680 41.967 162.608 107.908 1.00 41.66 O
ATOM 11 C2' A B2680 41.955 160.201 107.460 1.00 39.77 C
ATOM 12 O2' A B2680 41.659 160.468 106.107 1.00 39.57 O
ATOM 13 C1' A B2680 43.095 159.189 107.485 1.00 38.78 C
ATOM 14 N9 A B2680 43.019 158.263 108.613 1.00 39.14 N
ATOM 15 C8 A B2680 43.642 158.350 109.832 1.00 39.06 C
ATOM 16 N7 A B2680 43.404 157.332 110.620 1.00 39.45 N
ATOM 17 C5 A B2680 42.560 156.523 109.873 1.00 40.29 C
ATOM 18 C6 A B2680 41.957 155.285 110.137 1.00 40.70 C
ATOM 19 N6 A B2680 42.119 154.610 111.275 1.00 41.03 N
ATOM 20 N1 A B2680 41.171 154.754 109.179 1.00 40.44 N
ATOM 21 C2 A B2680 41.009 155.427 108.037 1.00 39.09 C
ATOM 22 N3 A B2680 41.524 156.591 107.669 1.00 39.42 N
ATOM 23 C4 A B2680 42.302 157.093 108.642 1.00 39.72 C
ATOM 24 P G B2681 41.296 163.475 109.079 1.00 43.57 P
ATOM 25 OP1 G B2681 40.521 164.505 108.348 1.00 45.05 O
ATOM 26 OP2 G B2681 42.334 163.900 110.048 1.00 41.36 O
ATOM 27 O5' G B2681 40.296 162.463 109.804 1.00 42.50 O
TER
Atoms:
C2: (47.630,164.890,116.032)
OP1: (48.141,159.335,121.407)
OP2: (49.037,161.750,121.423)
C4: (49.108,165.760,117.611)
O5': (47.630,160.945,119.532)
C3': (47.481,160.631,116.568)
C1': (46.442,162.754,116.472)
O4': (45.973,162.082,117.624)
C5': (46.602,160.163,118.922)
P: (47.962,160.780,121.080)
O2: (47.052,164.943,114.932)
C4': (46.317,160.675,117.540)
C2': (47.085,161.705,115.563)
O2': (46.096,161.255,114.664)
N1: (47.377,163.805,116.897)
N3: (48.501,165.851,116.423)
N4: (49.966,166.722,117.951)
C6: (48.001,163.732,118.112)
C5: (48.865,164.678,118.504)
O3': (47.587,159.332,115.974)
OP1: (48.141,159.335,121.407)
OP2: (49.037,161.750,121.423)
C4: (49.108,165.760,117.611)
O5': (47.630,160.945,119.532)
C3': (47.481,160.631,116.568)
C1': (46.442,162.754,116.472)
O4': (45.973,162.082,117.624)
C5': (46.602,160.163,118.922)
P: (47.962,160.780,121.080)
O2: (47.052,164.943,114.932)
C4': (46.317,160.675,117.540)
C2': (47.085,161.705,115.563)
O2': (46.096,161.255,114.664)
N1: (47.377,163.805,116.897)
N3: (48.501,165.851,116.423)
N4: (49.966,166.722,117.951)
C6: (48.001,163.732,118.112)
C5: (48.865,164.678,118.504)
O3': (47.587,159.332,115.974)
OP1: (45.585,163.545,111.105)
OP2: (45.370,161.315,112.355)
C3': (42.585,161.368,108.210)
C1': (43.095,159.189,107.485)
C5': (45.051,161.984,108.595)
O4': (44.302,159.919,107.588)
C8: (43.642,158.350,109.832)
O2': (41.659,160.468,106.107)
C6: (41.957,155.285,110.137)
C5: (42.560,156.523,109.873)
C4: (42.302,157.093,108.642)
P: (45.768,162.067,111.145)
C4': (44.015,161.334,107.705)
C2': (41.955,160.201,107.460)
C2: (41.009,155.427,108.037)
N1: (41.171,154.754,109.179)
N3: (41.524,156.591,107.669)
N6: (42.119,154.610,111.275)
N7: (43.404,157.332,110.620)
N9: (43.019,158.263,108.613)
O5': (45.036,161.381,109.903)
O3': (41.967,162.608,107.908)
OP2: (45.370,161.315,112.355)
C3': (42.585,161.368,108.210)
C1': (43.095,159.189,107.485)
C5': (45.051,161.984,108.595)
O4': (44.302,159.919,107.588)
C8: (43.642,158.350,109.832)
O2': (41.659,160.468,106.107)
C6: (41.957,155.285,110.137)
C5: (42.560,156.523,109.873)
C4: (42.302,157.093,108.642)
P: (45.768,162.067,111.145)
C4': (44.015,161.334,107.705)
C2': (41.955,160.201,107.460)
C2: (41.009,155.427,108.037)
N1: (41.171,154.754,109.179)
N3: (41.524,156.591,107.669)
N6: (42.119,154.610,111.275)
N7: (43.404,157.332,110.620)
N9: (43.019,158.263,108.613)
O5': (45.036,161.381,109.903)
O3': (41.967,162.608,107.908)
Image (generated by PyMOL):