Doublet info:
Details
Nucleotide types:
AG
Description:
SH_tran: SH_tran
Program used:
JS
Has errors:
False
Source
PDB id:
SPEC:B5:A5
Extra
PDB:
ATOM 67 O3' A A 3 38.329 148.855 127.413 1.00 34.33 O
ATOM 68 P A A 4 36.801 149.294 127.256 1.00 32.93 P
ATOM 69 OP1 A A 4 36.592 149.962 125.951 1.00 35.86 O
ATOM 70 OP2 A A 4 36.409 150.197 128.360 1.00 29.41 O
ATOM 71 O5' A A 4 36.035 147.891 127.357 1.00 30.79 O
ATOM 72 C5' A A 4 35.840 147.039 126.207 1.00 32.10 C
ATOM 73 C4' A A 4 35.227 145.701 126.632 1.00 34.01 C
ATOM 74 O4' A A 4 36.108 144.988 127.530 1.00 33.77 O
ATOM 75 C3' A A 4 33.911 145.897 127.386 1.00 34.45 C
ATOM 76 O3' A A 4 32.790 146.024 126.476 1.00 35.26 O
ATOM 77 C2' A A 4 33.842 144.574 128.142 1.00 33.75 C
ATOM 78 O2' A A 4 33.392 143.511 127.305 1.00 37.11 O
ATOM 79 C1' A A 4 35.298 144.352 128.552 1.00 32.40 C
ATOM 80 N9 A A 4 35.626 144.898 129.891 1.00 28.60 N
ATOM 81 C8 A A 4 36.450 145.952 130.221 1.00 26.58 C
ATOM 82 N7 A A 4 36.578 146.150 131.479 1.00 28.49 N
ATOM 83 C5 A A 4 35.785 145.200 132.062 1.00 27.48 C
ATOM 84 C6 A A 4 35.472 144.852 133.401 1.00 28.31 C
ATOM 85 N6 A A 4 35.998 145.488 134.484 1.00 28.66 N
ATOM 86 N1 A A 4 34.638 143.872 133.638 1.00 27.09 N
ATOM 87 C2 A A 4 34.098 143.216 132.613 1.00 28.24 C
ATOM 88 N3 A A 4 34.305 143.421 131.315 1.00 29.39 N
ATOM 89 C4 A A 4 35.173 144.434 131.091 1.00 29.19 C
ATOM 90 H5'1 A A 4 36.802 146.860 125.761 1.00 0.00 H
ATOM 91 H5'2 A A 4 35.171 147.545 125.533 1.00 0.00 H
ATOM 92 H4' A A 4 35.075 145.075 125.770 1.00 0.00 H
ATOM 93 H3' A A 4 33.946 146.729 128.068 1.00 0.00 H
ATOM 94 H1' A A 4 35.498 143.301 128.623 1.00 0.00 H
ATOM 95 H2' A A 4 33.174 144.610 128.977 1.00 0.00 H
ATOM 96 HO'2 A A 4 32.504 143.709 126.999 1.00 0.00 H
ATOM 97 H8 A A 4 36.934 146.535 129.465 1.00 0.00 H
ATOM 98 H61 A A 4 36.638 146.240 134.354 1.00 0.00 H
ATOM 99 H62 A A 4 35.742 145.199 135.401 1.00 0.00 H
ATOM 100 H2 A A 4 33.414 142.427 132.865 1.00 0.00 H
ATOM 101 P G A 5 31.472 146.858 126.848 1.00 35.23 P
ATOM 102 OP1 G A 5 30.484 146.762 125.750 1.00 37.98 O
ATOM 103 OP2 G A 5 31.809 148.275 127.107 1.00 34.75 O
ATOM 104 O5' G A 5 30.943 146.168 128.193 1.00 34.41 O
TER
ATOM 1 O3' G B 6 30.873 139.280 137.233 1.00 43.59 O
ATOM 2 P G B 7 31.883 138.095 136.871 1.00 44.30 P
ATOM 3 OP1 G B 7 31.948 137.120 137.983 1.00 44.72 O
ATOM 4 OP2 G B 7 33.231 138.635 136.585 1.00 43.65 O
ATOM 5 O5' G B 7 31.218 137.477 135.553 1.00 39.95 O
ATOM 6 C5' G B 7 30.173 136.482 135.613 1.00 37.03 C
ATOM 7 C4' G B 7 29.625 136.199 134.211 1.00 37.70 C
ATOM 8 O4' G B 7 29.039 137.387 133.633 1.00 36.54 O
ATOM 9 C3' G B 7 30.731 135.761 133.251 1.00 37.21 C
ATOM 10 O3' G B 7 31.011 134.346 133.377 1.00 36.35 O
ATOM 11 C2' G B 7 30.063 136.077 131.915 1.00 34.97 C
ATOM 12 O2' G B 7 29.126 135.077 131.523 1.00 35.30 O
ATOM 13 C1' G B 7 29.346 137.395 132.215 1.00 34.71 C
ATOM 14 N9 G B 7 30.176 138.569 131.865 1.00 32.72 N
ATOM 15 C8 G B 7 30.837 139.450 132.692 1.00 30.97 C
ATOM 16 N7 G B 7 31.530 140.331 132.074 1.00 30.00 N
ATOM 17 C5 G B 7 31.327 140.065 130.749 1.00 29.55 C
ATOM 18 C6 G B 7 31.853 140.726 129.570 1.00 29.13 C
ATOM 19 O6 G B 7 32.614 141.683 129.493 1.00 28.71 O
ATOM 20 N1 G B 7 31.380 140.114 128.407 1.00 30.31 N
ATOM 21 C2 G B 7 30.526 139.048 128.367 1.00 29.96 C
ATOM 22 N2 G B 7 30.149 138.583 127.144 1.00 32.13 N
ATOM 23 N3 G B 7 30.055 138.455 129.431 1.00 30.48 N
ATOM 24 C4 G B 7 30.480 138.986 130.605 1.00 28.75 C
ATOM 25 H5'1 G B 7 29.381 136.871 136.230 1.00 0.00 H
ATOM 26 H5'2 G B 7 30.599 135.583 136.024 1.00 0.00 H
ATOM 27 H4' G B 7 28.853 135.451 134.261 1.00 0.00 H
ATOM 28 H3' G B 7 31.631 136.338 133.371 1.00 0.00 H
ATOM 29 H1' G B 7 28.463 137.479 131.615 1.00 0.00 H
ATOM 30 H2' G B 7 30.772 136.160 131.114 1.00 0.00 H
ATOM 31 HO'2 G B 7 28.501 134.933 132.237 1.00 0.00 H
ATOM 32 H8 G B 7 30.759 139.377 133.757 1.00 0.00 H
ATOM 33 H1 G B 7 31.709 140.506 127.551 1.00 0.00 H
ATOM 34 H21 G B 7 29.526 137.810 127.079 1.00 0.00 H
ATOM 35 H22 G B 7 30.497 139.017 126.318 1.00 0.00 H
ATOM 36 P U B 8 32.452 133.726 133.047 1.00 34.47 P
ATOM 37 OP1 U B 8 32.457 132.271 133.319 1.00 39.78 O
ATOM 38 OP2 U B 8 33.512 134.397 133.832 1.00 31.97 O
ATOM 39 O5' U B 8 32.648 134.041 131.490 1.00 31.99 O
TER
ATOM 68 P A A 4 36.801 149.294 127.256 1.00 32.93 P
ATOM 69 OP1 A A 4 36.592 149.962 125.951 1.00 35.86 O
ATOM 70 OP2 A A 4 36.409 150.197 128.360 1.00 29.41 O
ATOM 71 O5' A A 4 36.035 147.891 127.357 1.00 30.79 O
ATOM 72 C5' A A 4 35.840 147.039 126.207 1.00 32.10 C
ATOM 73 C4' A A 4 35.227 145.701 126.632 1.00 34.01 C
ATOM 74 O4' A A 4 36.108 144.988 127.530 1.00 33.77 O
ATOM 75 C3' A A 4 33.911 145.897 127.386 1.00 34.45 C
ATOM 76 O3' A A 4 32.790 146.024 126.476 1.00 35.26 O
ATOM 77 C2' A A 4 33.842 144.574 128.142 1.00 33.75 C
ATOM 78 O2' A A 4 33.392 143.511 127.305 1.00 37.11 O
ATOM 79 C1' A A 4 35.298 144.352 128.552 1.00 32.40 C
ATOM 80 N9 A A 4 35.626 144.898 129.891 1.00 28.60 N
ATOM 81 C8 A A 4 36.450 145.952 130.221 1.00 26.58 C
ATOM 82 N7 A A 4 36.578 146.150 131.479 1.00 28.49 N
ATOM 83 C5 A A 4 35.785 145.200 132.062 1.00 27.48 C
ATOM 84 C6 A A 4 35.472 144.852 133.401 1.00 28.31 C
ATOM 85 N6 A A 4 35.998 145.488 134.484 1.00 28.66 N
ATOM 86 N1 A A 4 34.638 143.872 133.638 1.00 27.09 N
ATOM 87 C2 A A 4 34.098 143.216 132.613 1.00 28.24 C
ATOM 88 N3 A A 4 34.305 143.421 131.315 1.00 29.39 N
ATOM 89 C4 A A 4 35.173 144.434 131.091 1.00 29.19 C
ATOM 90 H5'1 A A 4 36.802 146.860 125.761 1.00 0.00 H
ATOM 91 H5'2 A A 4 35.171 147.545 125.533 1.00 0.00 H
ATOM 92 H4' A A 4 35.075 145.075 125.770 1.00 0.00 H
ATOM 93 H3' A A 4 33.946 146.729 128.068 1.00 0.00 H
ATOM 94 H1' A A 4 35.498 143.301 128.623 1.00 0.00 H
ATOM 95 H2' A A 4 33.174 144.610 128.977 1.00 0.00 H
ATOM 96 HO'2 A A 4 32.504 143.709 126.999 1.00 0.00 H
ATOM 97 H8 A A 4 36.934 146.535 129.465 1.00 0.00 H
ATOM 98 H61 A A 4 36.638 146.240 134.354 1.00 0.00 H
ATOM 99 H62 A A 4 35.742 145.199 135.401 1.00 0.00 H
ATOM 100 H2 A A 4 33.414 142.427 132.865 1.00 0.00 H
ATOM 101 P G A 5 31.472 146.858 126.848 1.00 35.23 P
ATOM 102 OP1 G A 5 30.484 146.762 125.750 1.00 37.98 O
ATOM 103 OP2 G A 5 31.809 148.275 127.107 1.00 34.75 O
ATOM 104 O5' G A 5 30.943 146.168 128.193 1.00 34.41 O
TER
ATOM 1 O3' G B 6 30.873 139.280 137.233 1.00 43.59 O
ATOM 2 P G B 7 31.883 138.095 136.871 1.00 44.30 P
ATOM 3 OP1 G B 7 31.948 137.120 137.983 1.00 44.72 O
ATOM 4 OP2 G B 7 33.231 138.635 136.585 1.00 43.65 O
ATOM 5 O5' G B 7 31.218 137.477 135.553 1.00 39.95 O
ATOM 6 C5' G B 7 30.173 136.482 135.613 1.00 37.03 C
ATOM 7 C4' G B 7 29.625 136.199 134.211 1.00 37.70 C
ATOM 8 O4' G B 7 29.039 137.387 133.633 1.00 36.54 O
ATOM 9 C3' G B 7 30.731 135.761 133.251 1.00 37.21 C
ATOM 10 O3' G B 7 31.011 134.346 133.377 1.00 36.35 O
ATOM 11 C2' G B 7 30.063 136.077 131.915 1.00 34.97 C
ATOM 12 O2' G B 7 29.126 135.077 131.523 1.00 35.30 O
ATOM 13 C1' G B 7 29.346 137.395 132.215 1.00 34.71 C
ATOM 14 N9 G B 7 30.176 138.569 131.865 1.00 32.72 N
ATOM 15 C8 G B 7 30.837 139.450 132.692 1.00 30.97 C
ATOM 16 N7 G B 7 31.530 140.331 132.074 1.00 30.00 N
ATOM 17 C5 G B 7 31.327 140.065 130.749 1.00 29.55 C
ATOM 18 C6 G B 7 31.853 140.726 129.570 1.00 29.13 C
ATOM 19 O6 G B 7 32.614 141.683 129.493 1.00 28.71 O
ATOM 20 N1 G B 7 31.380 140.114 128.407 1.00 30.31 N
ATOM 21 C2 G B 7 30.526 139.048 128.367 1.00 29.96 C
ATOM 22 N2 G B 7 30.149 138.583 127.144 1.00 32.13 N
ATOM 23 N3 G B 7 30.055 138.455 129.431 1.00 30.48 N
ATOM 24 C4 G B 7 30.480 138.986 130.605 1.00 28.75 C
ATOM 25 H5'1 G B 7 29.381 136.871 136.230 1.00 0.00 H
ATOM 26 H5'2 G B 7 30.599 135.583 136.024 1.00 0.00 H
ATOM 27 H4' G B 7 28.853 135.451 134.261 1.00 0.00 H
ATOM 28 H3' G B 7 31.631 136.338 133.371 1.00 0.00 H
ATOM 29 H1' G B 7 28.463 137.479 131.615 1.00 0.00 H
ATOM 30 H2' G B 7 30.772 136.160 131.114 1.00 0.00 H
ATOM 31 HO'2 G B 7 28.501 134.933 132.237 1.00 0.00 H
ATOM 32 H8 G B 7 30.759 139.377 133.757 1.00 0.00 H
ATOM 33 H1 G B 7 31.709 140.506 127.551 1.00 0.00 H
ATOM 34 H21 G B 7 29.526 137.810 127.079 1.00 0.00 H
ATOM 35 H22 G B 7 30.497 139.017 126.318 1.00 0.00 H
ATOM 36 P U B 8 32.452 133.726 133.047 1.00 34.47 P
ATOM 37 OP1 U B 8 32.457 132.271 133.319 1.00 39.78 O
ATOM 38 OP2 U B 8 33.512 134.397 133.832 1.00 31.97 O
ATOM 39 O5' U B 8 32.648 134.041 131.490 1.00 31.99 O
TER
Atoms:
OP1: (36.592,149.962,125.951)
OP2: (36.409,150.197,128.360)
C3': (33.911,145.897,127.386)
C1': (35.298,144.352,128.552)
C5': (35.840,147.039,126.207)
H2': (33.174,144.610,128.977)
H3': (33.946,146.729,128.068)
O4': (36.108,144.988,127.530)
C8: (36.450,145.952,130.221)
O2': (33.392,143.511,127.305)
N7: (36.578,146.150,131.479)
C6: (35.472,144.852,133.401)
C5: (35.785,145.200,132.062)
C4: (35.173,144.434,131.091)
HO'2: (32.504,143.709,126.999)
N9: (35.626,144.898,129.891)
C4': (35.227,145.701,126.632)
C2': (33.842,144.574,128.142)
H5'2: (35.171,147.545,125.533)
C2: (34.098,143.216,132.613)
N1: (34.638,143.872,133.638)
N3: (34.305,143.421,131.315)
N6: (35.998,145.488,134.484)
H1': (35.498,143.301,128.623)
H4': (35.075,145.075,125.770)
H8: (36.934,146.535,129.465)
P: (36.801,149.294,127.256)
H2: (33.414,142.427,132.865)
O5': (36.035,147.891,127.357)
H61: (36.638,146.240,134.354)
H62: (35.742,145.199,135.401)
O3': (32.790,146.024,126.476)
H5'1: (36.802,146.860,125.761)
OP2: (36.409,150.197,128.360)
C3': (33.911,145.897,127.386)
C1': (35.298,144.352,128.552)
C5': (35.840,147.039,126.207)
H2': (33.174,144.610,128.977)
H3': (33.946,146.729,128.068)
O4': (36.108,144.988,127.530)
C8: (36.450,145.952,130.221)
O2': (33.392,143.511,127.305)
N7: (36.578,146.150,131.479)
C6: (35.472,144.852,133.401)
C5: (35.785,145.200,132.062)
C4: (35.173,144.434,131.091)
HO'2: (32.504,143.709,126.999)
N9: (35.626,144.898,129.891)
C4': (35.227,145.701,126.632)
C2': (33.842,144.574,128.142)
H5'2: (35.171,147.545,125.533)
C2: (34.098,143.216,132.613)
N1: (34.638,143.872,133.638)
N3: (34.305,143.421,131.315)
N6: (35.998,145.488,134.484)
H1': (35.498,143.301,128.623)
H4': (35.075,145.075,125.770)
H8: (36.934,146.535,129.465)
P: (36.801,149.294,127.256)
H2: (33.414,142.427,132.865)
O5': (36.035,147.891,127.357)
H61: (36.638,146.240,134.354)
H62: (35.742,145.199,135.401)
O3': (32.790,146.024,126.476)
H5'1: (36.802,146.860,125.761)
OP1: (31.948,137.120,137.983)
OP2: (33.231,138.635,136.585)
C3': (30.731,135.761,133.251)
H21: (29.526,137.810,127.079)
H22: (30.497,139.017,126.318)
C5': (30.173,136.482,135.613)
O6: (32.614,141.683,129.493)
H2': (30.772,136.160,131.114)
H3': (31.631,136.338,133.371)
O4': (29.039,137.387,133.633)
C8: (30.837,139.450,132.692)
C2: (30.526,139.048,128.367)
N7: (31.530,140.331,132.074)
C6: (31.853,140.726,129.570)
C5: (31.327,140.065,130.749)
C4: (30.480,138.986,130.605)
C1': (29.346,137.395,132.215)
HO'2: (28.501,134.933,132.237)
N9: (30.176,138.569,131.865)
C4': (29.625,136.199,134.211)
C2': (30.063,136.077,131.915)
H5'2: (30.599,135.583,136.024)
O2': (29.126,135.077,131.523)
N1: (31.380,140.114,128.407)
N2: (30.149,138.583,127.144)
N3: (30.055,138.455,129.431)
H1': (28.463,137.479,131.615)
H4': (28.853,135.451,134.261)
H8: (30.759,139.377,133.757)
P: (31.883,138.095,136.871)
H1: (31.709,140.506,127.551)
O5': (31.218,137.477,135.553)
O3': (31.011,134.346,133.377)
H5'1: (29.381,136.871,136.230)
OP2: (33.231,138.635,136.585)
C3': (30.731,135.761,133.251)
H21: (29.526,137.810,127.079)
H22: (30.497,139.017,126.318)
C5': (30.173,136.482,135.613)
O6: (32.614,141.683,129.493)
H2': (30.772,136.160,131.114)
H3': (31.631,136.338,133.371)
O4': (29.039,137.387,133.633)
C8: (30.837,139.450,132.692)
C2: (30.526,139.048,128.367)
N7: (31.530,140.331,132.074)
C6: (31.853,140.726,129.570)
C5: (31.327,140.065,130.749)
C4: (30.480,138.986,130.605)
C1': (29.346,137.395,132.215)
HO'2: (28.501,134.933,132.237)
N9: (30.176,138.569,131.865)
C4': (29.625,136.199,134.211)
C2': (30.063,136.077,131.915)
H5'2: (30.599,135.583,136.024)
O2': (29.126,135.077,131.523)
N1: (31.380,140.114,128.407)
N2: (30.149,138.583,127.144)
N3: (30.055,138.455,129.431)
H1': (28.463,137.479,131.615)
H4': (28.853,135.451,134.261)
H8: (30.759,139.377,133.757)
P: (31.883,138.095,136.871)
H1: (31.709,140.506,127.551)
O5': (31.218,137.477,135.553)
O3': (31.011,134.346,133.377)
H5'1: (29.381,136.871,136.230)
Image (generated by PyMOL):