Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:924:923
Extra
PDB:
ATOM 1 O3' U A 23 62.053 1.803 100.249 1.00123.18 O
ATOM 2 P G A 24 62.170 3.202 99.465 1.00118.22 P
ATOM 3 OP1 G A 24 62.908 2.945 98.197 1.00118.07 O
ATOM 4 OP2 G A 24 62.688 4.215 100.423 1.00118.82 O
ATOM 5 O5' G A 24 60.659 3.580 99.125 1.00112.86 O
ATOM 6 C5' G A 24 60.078 3.291 97.835 1.00104.56 C
ATOM 7 C4' G A 24 58.970 4.276 97.537 1.00 98.62 C
ATOM 8 O4' G A 24 57.967 4.179 98.582 1.00 97.99 O
ATOM 9 C3' G A 24 59.389 5.739 97.556 1.00 94.64 C
ATOM 10 O3' G A 24 59.928 6.149 96.307 1.00 88.97 O
ATOM 11 C2' G A 24 58.089 6.450 97.901 1.00 94.47 C
ATOM 12 O2' G A 24 57.215 6.588 96.797 1.00 92.92 O
ATOM 13 C1' G A 24 57.488 5.474 98.915 1.00 95.38 C
ATOM 14 N9 G A 24 57.881 5.764 100.294 1.00 94.81 N
ATOM 15 C8 G A 24 58.631 4.974 101.137 1.00 94.09 C
ATOM 16 N7 G A 24 58.808 5.505 102.317 1.00 93.44 N
ATOM 17 C5 G A 24 58.133 6.717 102.251 1.00 93.73 C
ATOM 18 C6 G A 24 57.962 7.733 103.230 1.00 93.04 C
ATOM 19 O6 G A 24 58.366 7.758 104.397 1.00 91.95 O
ATOM 20 N1 G A 24 57.224 8.800 102.732 1.00 93.07 N
ATOM 21 C2 G A 24 56.707 8.880 101.464 1.00 93.59 C
ATOM 22 N2 G A 24 56.035 9.994 101.169 1.00 93.71 N
ATOM 23 N3 G A 24 56.843 7.938 100.549 1.00 94.06 N
ATOM 24 C4 G A 24 57.563 6.894 101.006 1.00 94.27 C
ATOM 25 P C A 25 61.126 7.215 96.266 1.00 83.65 P
ATOM 26 OP1 C A 25 61.406 7.444 94.830 1.00 84.10 O
ATOM 27 OP2 C A 25 62.221 6.777 97.167 1.00 83.89 O
ATOM 28 O5' C A 25 60.489 8.539 96.878 1.00 82.08 O
TER
ATOM 1 O3' U B 22 60.103 1.423 103.795 1.00131.81 O
ATOM 2 P U B 23 58.820 0.897 102.975 1.00133.53 P
ATOM 3 OP1 U B 23 57.722 1.871 103.227 1.00133.09 O
ATOM 4 OP2 U B 23 58.609 -0.546 103.291 1.00133.18 O
ATOM 5 O5' U B 23 59.260 1.035 101.445 1.00132.53 O
ATOM 6 C5' U B 23 59.459 -0.129 100.612 1.00131.32 C
ATOM 7 C4' U B 23 60.937 -0.379 100.403 1.00130.66 C
ATOM 8 O4' U B 23 61.121 -1.638 99.699 1.00132.26 O
ATOM 9 C3' U B 23 61.680 0.630 99.539 1.00128.97 C
ATOM 10 O3' U B 23 62.053 1.803 100.249 1.00123.18 O
ATOM 11 C2' U B 23 62.893 -0.173 99.085 1.00130.68 C
ATOM 12 O2' U B 23 63.901 -0.271 100.075 1.00129.96 O
ATOM 13 C1' U B 23 62.264 -1.549 98.855 1.00133.09 C
ATOM 14 N1 U B 23 61.841 -1.763 97.459 1.00135.93 N
ATOM 15 C2 U B 23 62.636 -2.578 96.660 1.00136.86 C
ATOM 16 O2 U B 23 63.654 -3.126 97.066 1.00137.02 O
ATOM 17 N3 U B 23 62.195 -2.727 95.364 1.00137.52 N
ATOM 18 C4 U B 23 61.069 -2.162 94.793 1.00137.63 C
ATOM 19 O4 U B 23 60.813 -2.386 93.607 1.00137.51 O
ATOM 20 C5 U B 23 60.298 -1.340 95.679 1.00137.38 C
ATOM 21 C6 U B 23 60.697 -1.172 96.947 1.00136.77 C
ATOM 22 P G B 24 62.170 3.202 99.465 1.00118.22 P
ATOM 23 OP1 G B 24 62.908 2.945 98.197 1.00118.07 O
ATOM 24 OP2 G B 24 62.688 4.215 100.423 1.00118.82 O
ATOM 25 O5' G B 24 60.659 3.580 99.125 1.00112.86 O
TER
ATOM 2 P G A 24 62.170 3.202 99.465 1.00118.22 P
ATOM 3 OP1 G A 24 62.908 2.945 98.197 1.00118.07 O
ATOM 4 OP2 G A 24 62.688 4.215 100.423 1.00118.82 O
ATOM 5 O5' G A 24 60.659 3.580 99.125 1.00112.86 O
ATOM 6 C5' G A 24 60.078 3.291 97.835 1.00104.56 C
ATOM 7 C4' G A 24 58.970 4.276 97.537 1.00 98.62 C
ATOM 8 O4' G A 24 57.967 4.179 98.582 1.00 97.99 O
ATOM 9 C3' G A 24 59.389 5.739 97.556 1.00 94.64 C
ATOM 10 O3' G A 24 59.928 6.149 96.307 1.00 88.97 O
ATOM 11 C2' G A 24 58.089 6.450 97.901 1.00 94.47 C
ATOM 12 O2' G A 24 57.215 6.588 96.797 1.00 92.92 O
ATOM 13 C1' G A 24 57.488 5.474 98.915 1.00 95.38 C
ATOM 14 N9 G A 24 57.881 5.764 100.294 1.00 94.81 N
ATOM 15 C8 G A 24 58.631 4.974 101.137 1.00 94.09 C
ATOM 16 N7 G A 24 58.808 5.505 102.317 1.00 93.44 N
ATOM 17 C5 G A 24 58.133 6.717 102.251 1.00 93.73 C
ATOM 18 C6 G A 24 57.962 7.733 103.230 1.00 93.04 C
ATOM 19 O6 G A 24 58.366 7.758 104.397 1.00 91.95 O
ATOM 20 N1 G A 24 57.224 8.800 102.732 1.00 93.07 N
ATOM 21 C2 G A 24 56.707 8.880 101.464 1.00 93.59 C
ATOM 22 N2 G A 24 56.035 9.994 101.169 1.00 93.71 N
ATOM 23 N3 G A 24 56.843 7.938 100.549 1.00 94.06 N
ATOM 24 C4 G A 24 57.563 6.894 101.006 1.00 94.27 C
ATOM 25 P C A 25 61.126 7.215 96.266 1.00 83.65 P
ATOM 26 OP1 C A 25 61.406 7.444 94.830 1.00 84.10 O
ATOM 27 OP2 C A 25 62.221 6.777 97.167 1.00 83.89 O
ATOM 28 O5' C A 25 60.489 8.539 96.878 1.00 82.08 O
TER
ATOM 1 O3' U B 22 60.103 1.423 103.795 1.00131.81 O
ATOM 2 P U B 23 58.820 0.897 102.975 1.00133.53 P
ATOM 3 OP1 U B 23 57.722 1.871 103.227 1.00133.09 O
ATOM 4 OP2 U B 23 58.609 -0.546 103.291 1.00133.18 O
ATOM 5 O5' U B 23 59.260 1.035 101.445 1.00132.53 O
ATOM 6 C5' U B 23 59.459 -0.129 100.612 1.00131.32 C
ATOM 7 C4' U B 23 60.937 -0.379 100.403 1.00130.66 C
ATOM 8 O4' U B 23 61.121 -1.638 99.699 1.00132.26 O
ATOM 9 C3' U B 23 61.680 0.630 99.539 1.00128.97 C
ATOM 10 O3' U B 23 62.053 1.803 100.249 1.00123.18 O
ATOM 11 C2' U B 23 62.893 -0.173 99.085 1.00130.68 C
ATOM 12 O2' U B 23 63.901 -0.271 100.075 1.00129.96 O
ATOM 13 C1' U B 23 62.264 -1.549 98.855 1.00133.09 C
ATOM 14 N1 U B 23 61.841 -1.763 97.459 1.00135.93 N
ATOM 15 C2 U B 23 62.636 -2.578 96.660 1.00136.86 C
ATOM 16 O2 U B 23 63.654 -3.126 97.066 1.00137.02 O
ATOM 17 N3 U B 23 62.195 -2.727 95.364 1.00137.52 N
ATOM 18 C4 U B 23 61.069 -2.162 94.793 1.00137.63 C
ATOM 19 O4 U B 23 60.813 -2.386 93.607 1.00137.51 O
ATOM 20 C5 U B 23 60.298 -1.340 95.679 1.00137.38 C
ATOM 21 C6 U B 23 60.697 -1.172 96.947 1.00136.77 C
ATOM 22 P G B 24 62.170 3.202 99.465 1.00118.22 P
ATOM 23 OP1 G B 24 62.908 2.945 98.197 1.00118.07 O
ATOM 24 OP2 G B 24 62.688 4.215 100.423 1.00118.82 O
ATOM 25 O5' G B 24 60.659 3.580 99.125 1.00112.86 O
TER
Atoms:
OP1: (62.908,2.945,98.197)
OP2: (62.688,4.215,100.423)
C3': (59.389,5.739,97.556)
C1': (57.488,5.474,98.915)
C5': (60.078,3.291,97.835)
O6: (58.366,7.758,104.397)
O4': (57.967,4.179,98.582)
C8: (58.631,4.974,101.137)
C2: (56.707,8.880,101.464)
C6: (57.962,7.733,103.230)
C5: (58.133,6.717,102.251)
C4: (57.563,6.894,101.006)
P: (62.170,3.202,99.465)
C4': (58.970,4.276,97.537)
C2': (58.089,6.450,97.901)
O2': (57.215,6.588,96.797)
N1: (57.224,8.800,102.732)
N2: (56.035,9.994,101.169)
N3: (56.843,7.938,100.549)
N7: (58.808,5.505,102.317)
N9: (57.881,5.764,100.294)
O5': (60.659,3.580,99.125)
O3': (59.928,6.149,96.307)
OP2: (62.688,4.215,100.423)
C3': (59.389,5.739,97.556)
C1': (57.488,5.474,98.915)
C5': (60.078,3.291,97.835)
O6: (58.366,7.758,104.397)
O4': (57.967,4.179,98.582)
C8: (58.631,4.974,101.137)
C2: (56.707,8.880,101.464)
C6: (57.962,7.733,103.230)
C5: (58.133,6.717,102.251)
C4: (57.563,6.894,101.006)
P: (62.170,3.202,99.465)
C4': (58.970,4.276,97.537)
C2': (58.089,6.450,97.901)
O2': (57.215,6.588,96.797)
N1: (57.224,8.800,102.732)
N2: (56.035,9.994,101.169)
N3: (56.843,7.938,100.549)
N7: (58.808,5.505,102.317)
N9: (57.881,5.764,100.294)
O5': (60.659,3.580,99.125)
O3': (59.928,6.149,96.307)
C4: (61.069,-2.162,94.793)
N3: (62.195,-2.727,95.364)
OP1: (57.722,1.871,103.227)
OP2: (58.609,-0.546,103.291)
C2: (62.636,-2.578,96.660)
C1': (62.264,-1.549,98.855)
C3': (61.680,0.630,99.539)
O5': (59.260,1.035,101.445)
O4': (61.121,-1.638,99.699)
C5': (59.459,-0.129,100.612)
P: (58.820,0.897,102.975)
C4': (60.937,-0.379,100.403)
C2': (62.893,-0.173,99.085)
O2': (63.901,-0.271,100.075)
N1: (61.841,-1.763,97.459)
O4: (60.813,-2.386,93.607)
O2: (63.654,-3.126,97.066)
C6: (60.697,-1.172,96.947)
C5: (60.298,-1.340,95.679)
O3': (62.053,1.803,100.249)
N3: (62.195,-2.727,95.364)
OP1: (57.722,1.871,103.227)
OP2: (58.609,-0.546,103.291)
C2: (62.636,-2.578,96.660)
C1': (62.264,-1.549,98.855)
C3': (61.680,0.630,99.539)
O5': (59.260,1.035,101.445)
O4': (61.121,-1.638,99.699)
C5': (59.459,-0.129,100.612)
P: (58.820,0.897,102.975)
C4': (60.937,-0.379,100.403)
C2': (62.893,-0.173,99.085)
O2': (63.901,-0.271,100.075)
N1: (61.841,-1.763,97.459)
O4: (60.813,-2.386,93.607)
O2: (63.654,-3.126,97.066)
C6: (60.697,-1.172,96.947)
C5: (60.298,-1.340,95.679)
O3': (62.053,1.803,100.249)
Image (generated by PyMOL):