Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:924:923
Extra
PDB:
ATOM 1 O3' U A 23 61.564 1.860 99.963 1.00115.64 O
ATOM 2 P G A 24 61.524 3.193 99.068 1.00109.88 P
ATOM 3 OP1 G A 24 62.235 2.897 97.794 1.00109.42 O
ATOM 4 OP2 G A 24 61.968 4.333 99.907 1.00110.15 O
ATOM 5 O5' G A 24 59.975 3.388 98.761 1.00105.48 O
ATOM 6 C5' G A 24 59.453 3.263 97.424 1.00 97.99 C
ATOM 7 C4' G A 24 58.512 4.408 97.132 1.00 91.58 C
ATOM 8 O4' G A 24 57.461 4.410 98.136 1.00 89.91 O
ATOM 9 C3' G A 24 59.137 5.790 97.242 1.00 87.93 C
ATOM 10 O3' G A 24 59.798 6.178 96.043 1.00 83.10 O
ATOM 11 C2' G A 24 57.937 6.658 97.584 1.00 87.20 C
ATOM 12 O2' G A 24 57.110 6.922 96.470 1.00 86.29 O
ATOM 13 C1' G A 24 57.194 5.738 98.551 1.00 87.47 C
ATOM 14 N9 G A 24 57.650 5.883 99.933 1.00 86.46 N
ATOM 15 C8 G A 24 58.272 4.936 100.716 1.00 85.87 C
ATOM 16 N7 G A 24 58.539 5.361 101.922 1.00 85.23 N
ATOM 17 C5 G A 24 58.067 6.666 101.937 1.00 85.24 C
ATOM 18 C6 G A 24 58.062 7.632 102.976 1.00 84.46 C
ATOM 19 O6 G A 24 58.464 7.520 104.132 1.00 83.45 O
ATOM 20 N1 G A 24 57.505 8.833 102.554 1.00 85.19 N
ATOM 21 C2 G A 24 57.007 9.075 101.298 1.00 86.19 C
ATOM 22 N2 G A 24 56.533 10.302 101.079 1.00 86.27 N
ATOM 23 N3 G A 24 56.984 8.180 100.328 1.00 86.63 N
ATOM 24 C4 G A 24 57.527 7.007 100.713 1.00 86.28 C
ATOM 25 P C A 25 61.095 7.127 96.118 1.00 78.10 P
ATOM 26 OP1 C A 25 61.563 7.298 94.723 1.00 77.84 O
ATOM 27 OP2 C A 25 62.034 6.617 97.148 1.00 78.00 O
ATOM 28 O5' C A 25 60.518 8.513 96.640 1.00 74.44 O
TER
ATOM 1 O3' U B 22 60.054 1.330 103.554 1.00126.04 O
ATOM 2 P U B 23 58.616 0.921 102.952 1.00128.51 P
ATOM 3 OP1 U B 23 57.658 1.982 103.387 1.00127.95 O
ATOM 4 OP2 U B 23 58.340 -0.503 103.301 1.00128.42 O
ATOM 5 O5' U B 23 58.820 1.044 101.368 1.00127.54 O
ATOM 6 C5' U B 23 59.034 -0.127 100.537 1.00125.74 C
ATOM 7 C4' U B 23 60.516 -0.352 100.305 1.00124.64 C
ATOM 8 O4' U B 23 60.721 -1.644 99.664 1.00126.41 O
ATOM 9 C3' U B 23 61.230 0.613 99.370 1.00122.56 C
ATOM 10 O3' U B 23 61.564 1.860 99.963 1.00115.64 O
ATOM 11 C2' U B 23 62.472 -0.184 98.985 1.00124.78 C
ATOM 12 O2' U B 23 63.478 -0.193 99.983 1.00124.29 O
ATOM 13 C1' U B 23 61.881 -1.587 98.838 1.00127.24 C
ATOM 14 N1 U B 23 61.504 -1.888 97.443 1.00129.85 N
ATOM 15 C2 U B 23 62.336 -2.736 96.718 1.00130.91 C
ATOM 16 O2 U B 23 63.338 -3.256 97.194 1.00131.54 O
ATOM 17 N3 U B 23 61.952 -2.951 95.413 1.00131.47 N
ATOM 18 C4 U B 23 60.848 -2.425 94.768 1.00131.45 C
ATOM 19 O4 U B 23 60.653 -2.696 93.580 1.00131.13 O
ATOM 20 C5 U B 23 60.033 -1.572 95.582 1.00131.34 C
ATOM 21 C6 U B 23 60.376 -1.339 96.858 1.00130.68 C
ATOM 22 P G B 24 61.524 3.193 99.068 1.00109.88 P
ATOM 23 OP1 G B 24 62.235 2.897 97.794 1.00109.42 O
ATOM 24 OP2 G B 24 61.968 4.333 99.907 1.00110.15 O
ATOM 25 O5' G B 24 59.975 3.388 98.761 1.00105.48 O
TER
ATOM 2 P G A 24 61.524 3.193 99.068 1.00109.88 P
ATOM 3 OP1 G A 24 62.235 2.897 97.794 1.00109.42 O
ATOM 4 OP2 G A 24 61.968 4.333 99.907 1.00110.15 O
ATOM 5 O5' G A 24 59.975 3.388 98.761 1.00105.48 O
ATOM 6 C5' G A 24 59.453 3.263 97.424 1.00 97.99 C
ATOM 7 C4' G A 24 58.512 4.408 97.132 1.00 91.58 C
ATOM 8 O4' G A 24 57.461 4.410 98.136 1.00 89.91 O
ATOM 9 C3' G A 24 59.137 5.790 97.242 1.00 87.93 C
ATOM 10 O3' G A 24 59.798 6.178 96.043 1.00 83.10 O
ATOM 11 C2' G A 24 57.937 6.658 97.584 1.00 87.20 C
ATOM 12 O2' G A 24 57.110 6.922 96.470 1.00 86.29 O
ATOM 13 C1' G A 24 57.194 5.738 98.551 1.00 87.47 C
ATOM 14 N9 G A 24 57.650 5.883 99.933 1.00 86.46 N
ATOM 15 C8 G A 24 58.272 4.936 100.716 1.00 85.87 C
ATOM 16 N7 G A 24 58.539 5.361 101.922 1.00 85.23 N
ATOM 17 C5 G A 24 58.067 6.666 101.937 1.00 85.24 C
ATOM 18 C6 G A 24 58.062 7.632 102.976 1.00 84.46 C
ATOM 19 O6 G A 24 58.464 7.520 104.132 1.00 83.45 O
ATOM 20 N1 G A 24 57.505 8.833 102.554 1.00 85.19 N
ATOM 21 C2 G A 24 57.007 9.075 101.298 1.00 86.19 C
ATOM 22 N2 G A 24 56.533 10.302 101.079 1.00 86.27 N
ATOM 23 N3 G A 24 56.984 8.180 100.328 1.00 86.63 N
ATOM 24 C4 G A 24 57.527 7.007 100.713 1.00 86.28 C
ATOM 25 P C A 25 61.095 7.127 96.118 1.00 78.10 P
ATOM 26 OP1 C A 25 61.563 7.298 94.723 1.00 77.84 O
ATOM 27 OP2 C A 25 62.034 6.617 97.148 1.00 78.00 O
ATOM 28 O5' C A 25 60.518 8.513 96.640 1.00 74.44 O
TER
ATOM 1 O3' U B 22 60.054 1.330 103.554 1.00126.04 O
ATOM 2 P U B 23 58.616 0.921 102.952 1.00128.51 P
ATOM 3 OP1 U B 23 57.658 1.982 103.387 1.00127.95 O
ATOM 4 OP2 U B 23 58.340 -0.503 103.301 1.00128.42 O
ATOM 5 O5' U B 23 58.820 1.044 101.368 1.00127.54 O
ATOM 6 C5' U B 23 59.034 -0.127 100.537 1.00125.74 C
ATOM 7 C4' U B 23 60.516 -0.352 100.305 1.00124.64 C
ATOM 8 O4' U B 23 60.721 -1.644 99.664 1.00126.41 O
ATOM 9 C3' U B 23 61.230 0.613 99.370 1.00122.56 C
ATOM 10 O3' U B 23 61.564 1.860 99.963 1.00115.64 O
ATOM 11 C2' U B 23 62.472 -0.184 98.985 1.00124.78 C
ATOM 12 O2' U B 23 63.478 -0.193 99.983 1.00124.29 O
ATOM 13 C1' U B 23 61.881 -1.587 98.838 1.00127.24 C
ATOM 14 N1 U B 23 61.504 -1.888 97.443 1.00129.85 N
ATOM 15 C2 U B 23 62.336 -2.736 96.718 1.00130.91 C
ATOM 16 O2 U B 23 63.338 -3.256 97.194 1.00131.54 O
ATOM 17 N3 U B 23 61.952 -2.951 95.413 1.00131.47 N
ATOM 18 C4 U B 23 60.848 -2.425 94.768 1.00131.45 C
ATOM 19 O4 U B 23 60.653 -2.696 93.580 1.00131.13 O
ATOM 20 C5 U B 23 60.033 -1.572 95.582 1.00131.34 C
ATOM 21 C6 U B 23 60.376 -1.339 96.858 1.00130.68 C
ATOM 22 P G B 24 61.524 3.193 99.068 1.00109.88 P
ATOM 23 OP1 G B 24 62.235 2.897 97.794 1.00109.42 O
ATOM 24 OP2 G B 24 61.968 4.333 99.907 1.00110.15 O
ATOM 25 O5' G B 24 59.975 3.388 98.761 1.00105.48 O
TER
Atoms:
OP1: (62.235,2.897,97.794)
OP2: (61.968,4.333,99.907)
C3': (59.137,5.790,97.242)
C1': (57.194,5.738,98.551)
C5': (59.453,3.263,97.424)
O6: (58.464,7.520,104.132)
O4': (57.461,4.410,98.136)
C8: (58.272,4.936,100.716)
C2: (57.007,9.075,101.298)
C6: (58.062,7.632,102.976)
C5: (58.067,6.666,101.937)
C4: (57.527,7.007,100.713)
P: (61.524,3.193,99.068)
C4': (58.512,4.408,97.132)
C2': (57.937,6.658,97.584)
O2': (57.110,6.922,96.470)
N1: (57.505,8.833,102.554)
N2: (56.533,10.302,101.079)
N3: (56.984,8.180,100.328)
N7: (58.539,5.361,101.922)
N9: (57.650,5.883,99.933)
O5': (59.975,3.388,98.761)
O3': (59.798,6.178,96.043)
OP2: (61.968,4.333,99.907)
C3': (59.137,5.790,97.242)
C1': (57.194,5.738,98.551)
C5': (59.453,3.263,97.424)
O6: (58.464,7.520,104.132)
O4': (57.461,4.410,98.136)
C8: (58.272,4.936,100.716)
C2: (57.007,9.075,101.298)
C6: (58.062,7.632,102.976)
C5: (58.067,6.666,101.937)
C4: (57.527,7.007,100.713)
P: (61.524,3.193,99.068)
C4': (58.512,4.408,97.132)
C2': (57.937,6.658,97.584)
O2': (57.110,6.922,96.470)
N1: (57.505,8.833,102.554)
N2: (56.533,10.302,101.079)
N3: (56.984,8.180,100.328)
N7: (58.539,5.361,101.922)
N9: (57.650,5.883,99.933)
O5': (59.975,3.388,98.761)
O3': (59.798,6.178,96.043)
C4: (60.848,-2.425,94.768)
N3: (61.952,-2.951,95.413)
OP1: (57.658,1.982,103.387)
OP2: (58.340,-0.503,103.301)
C2: (62.336,-2.736,96.718)
C1': (61.881,-1.587,98.838)
C3': (61.230,0.613,99.370)
O5': (58.820,1.044,101.368)
O4': (60.721,-1.644,99.664)
C5': (59.034,-0.127,100.537)
P: (58.616,0.921,102.952)
C4': (60.516,-0.352,100.305)
C2': (62.472,-0.184,98.985)
O2': (63.478,-0.193,99.983)
N1: (61.504,-1.888,97.443)
O4: (60.653,-2.696,93.580)
O2: (63.338,-3.256,97.194)
C6: (60.376,-1.339,96.858)
C5: (60.033,-1.572,95.582)
O3': (61.564,1.860,99.963)
N3: (61.952,-2.951,95.413)
OP1: (57.658,1.982,103.387)
OP2: (58.340,-0.503,103.301)
C2: (62.336,-2.736,96.718)
C1': (61.881,-1.587,98.838)
C3': (61.230,0.613,99.370)
O5': (58.820,1.044,101.368)
O4': (60.721,-1.644,99.664)
C5': (59.034,-0.127,100.537)
P: (58.616,0.921,102.952)
C4': (60.516,-0.352,100.305)
C2': (62.472,-0.184,98.985)
O2': (63.478,-0.193,99.983)
N1: (61.504,-1.888,97.443)
O4: (60.653,-2.696,93.580)
O2: (63.338,-3.256,97.194)
C6: (60.376,-1.339,96.858)
C5: (60.033,-1.572,95.582)
O3': (61.564,1.860,99.963)
Image (generated by PyMOL):