Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2H0W:B116:B56
Extra
PDB:
ATOM 1 O3' G A 115 11.588 11.659 -4.180 1.00 54.12 O
ATOM 2 P G A 116 10.454 11.458 -5.306 1.00 55.31 P
ATOM 3 OP1 G A 116 11.003 12.033 -6.565 1.00 54.72 O
ATOM 4 OP2 G A 116 9.174 11.978 -4.754 1.00 56.62 O
ATOM 5 O5' G A 116 10.266 9.881 -5.513 1.00 54.12 O
ATOM 6 C5' G A 116 11.316 8.948 -5.277 1.00 52.21 C
ATOM 7 C4' G A 116 11.856 8.390 -6.587 1.00 50.91 C
ATOM 8 O4' G A 116 12.994 7.549 -6.265 1.00 49.08 O
ATOM 9 C3' G A 116 10.966 7.483 -7.442 1.00 50.46 C
ATOM 10 O3' G A 116 10.173 8.222 -8.368 1.00 51.85 O
ATOM 11 C2' G A 116 11.994 6.699 -8.247 1.00 49.37 C
ATOM 12 O2' G A 116 12.487 7.448 -9.343 1.00 49.09 O
ATOM 13 C1' G A 116 13.115 6.522 -7.227 1.00 47.67 C
ATOM 14 N9 G A 116 13.100 5.236 -6.544 1.00 43.77 N
ATOM 15 C8 G A 116 12.523 4.929 -5.336 1.00 43.53 C
ATOM 16 N7 G A 116 12.728 3.690 -4.971 1.00 41.42 N
ATOM 17 C5 G A 116 13.474 3.148 -6.008 1.00 40.39 C
ATOM 18 C6 G A 116 14.000 1.845 -6.178 1.00 38.21 C
ATOM 19 O6 G A 116 13.910 0.873 -5.417 1.00 35.80 O
ATOM 20 N1 G A 116 14.696 1.729 -7.378 1.00 37.48 N
ATOM 21 C2 G A 116 14.863 2.741 -8.298 1.00 38.80 C
ATOM 22 N2 G A 116 15.569 2.446 -9.399 1.00 37.54 N
ATOM 23 N3 G A 116 14.375 3.955 -8.150 1.00 39.28 N
ATOM 24 C4 G A 116 13.700 4.089 -6.991 1.00 41.90 C
ATOM 25 P C A 117 9.062 7.465 -9.266 1.00 52.70 P
ATOM 26 OP1 C A 117 8.488 8.508 -10.157 1.00 52.43 O
ATOM 27 OP2 C A 117 8.170 6.687 -8.365 1.00 52.68 O
ATOM 28 O5' C A 117 9.862 6.425 -10.179 1.00 51.88 O
TER
ATOM 1 O3' C B 55 9.850 6.974 -1.282 1.00 38.15 O
ATOM 2 P U B 56 8.911 6.366 -2.447 1.00 39.36 P
ATOM 3 OP1 U B 56 9.747 5.599 -3.414 1.00 38.67 O
ATOM 4 OP2 U B 56 8.101 7.514 -2.934 1.00 38.89 O
ATOM 5 O5' U B 56 7.939 5.348 -1.694 1.00 39.32 O
ATOM 6 C5' U B 56 6.773 5.834 -1.042 1.00 41.63 C
ATOM 7 C4' U B 56 5.667 4.794 -1.031 1.00 43.18 C
ATOM 8 O4' U B 56 5.563 4.152 -2.332 1.00 44.09 O
ATOM 9 C3' U B 56 5.948 3.670 -0.038 1.00 43.66 C
ATOM 10 O3' U B 56 4.761 3.384 0.698 1.00 44.32 O
ATOM 11 C2' U B 56 6.528 2.518 -0.860 1.00 43.70 C
ATOM 12 O2' U B 56 6.096 1.244 -0.438 1.00 43.08 O
ATOM 13 C1' U B 56 5.900 2.791 -2.223 1.00 44.82 C
ATOM 14 N1 U B 56 6.549 2.317 -3.448 1.00 47.74 N
ATOM 15 C2 U B 56 5.925 1.265 -4.095 1.00 49.78 C
ATOM 16 O2 U B 56 4.892 0.764 -3.690 1.00 49.28 O
ATOM 17 N3 U B 56 6.551 0.824 -5.233 1.00 51.91 N
ATOM 18 C4 U B 56 7.713 1.317 -5.781 1.00 52.85 C
ATOM 19 O4 U B 56 8.155 0.804 -6.808 1.00 54.55 O
ATOM 20 C5 U B 56 8.303 2.413 -5.056 1.00 52.05 C
ATOM 21 C6 U B 56 7.710 2.865 -3.939 1.00 49.97 C
ATOM 22 P U B 57 4.830 2.954 2.239 1.00 45.67 P
ATOM 23 OP1 U B 57 4.855 4.204 3.042 1.00 47.27 O
ATOM 24 OP2 U B 57 5.888 1.932 2.426 1.00 45.93 O
ATOM 25 O5' U B 57 3.427 2.239 2.478 1.00 46.15 O
TER
ATOM 2 P G A 116 10.454 11.458 -5.306 1.00 55.31 P
ATOM 3 OP1 G A 116 11.003 12.033 -6.565 1.00 54.72 O
ATOM 4 OP2 G A 116 9.174 11.978 -4.754 1.00 56.62 O
ATOM 5 O5' G A 116 10.266 9.881 -5.513 1.00 54.12 O
ATOM 6 C5' G A 116 11.316 8.948 -5.277 1.00 52.21 C
ATOM 7 C4' G A 116 11.856 8.390 -6.587 1.00 50.91 C
ATOM 8 O4' G A 116 12.994 7.549 -6.265 1.00 49.08 O
ATOM 9 C3' G A 116 10.966 7.483 -7.442 1.00 50.46 C
ATOM 10 O3' G A 116 10.173 8.222 -8.368 1.00 51.85 O
ATOM 11 C2' G A 116 11.994 6.699 -8.247 1.00 49.37 C
ATOM 12 O2' G A 116 12.487 7.448 -9.343 1.00 49.09 O
ATOM 13 C1' G A 116 13.115 6.522 -7.227 1.00 47.67 C
ATOM 14 N9 G A 116 13.100 5.236 -6.544 1.00 43.77 N
ATOM 15 C8 G A 116 12.523 4.929 -5.336 1.00 43.53 C
ATOM 16 N7 G A 116 12.728 3.690 -4.971 1.00 41.42 N
ATOM 17 C5 G A 116 13.474 3.148 -6.008 1.00 40.39 C
ATOM 18 C6 G A 116 14.000 1.845 -6.178 1.00 38.21 C
ATOM 19 O6 G A 116 13.910 0.873 -5.417 1.00 35.80 O
ATOM 20 N1 G A 116 14.696 1.729 -7.378 1.00 37.48 N
ATOM 21 C2 G A 116 14.863 2.741 -8.298 1.00 38.80 C
ATOM 22 N2 G A 116 15.569 2.446 -9.399 1.00 37.54 N
ATOM 23 N3 G A 116 14.375 3.955 -8.150 1.00 39.28 N
ATOM 24 C4 G A 116 13.700 4.089 -6.991 1.00 41.90 C
ATOM 25 P C A 117 9.062 7.465 -9.266 1.00 52.70 P
ATOM 26 OP1 C A 117 8.488 8.508 -10.157 1.00 52.43 O
ATOM 27 OP2 C A 117 8.170 6.687 -8.365 1.00 52.68 O
ATOM 28 O5' C A 117 9.862 6.425 -10.179 1.00 51.88 O
TER
ATOM 1 O3' C B 55 9.850 6.974 -1.282 1.00 38.15 O
ATOM 2 P U B 56 8.911 6.366 -2.447 1.00 39.36 P
ATOM 3 OP1 U B 56 9.747 5.599 -3.414 1.00 38.67 O
ATOM 4 OP2 U B 56 8.101 7.514 -2.934 1.00 38.89 O
ATOM 5 O5' U B 56 7.939 5.348 -1.694 1.00 39.32 O
ATOM 6 C5' U B 56 6.773 5.834 -1.042 1.00 41.63 C
ATOM 7 C4' U B 56 5.667 4.794 -1.031 1.00 43.18 C
ATOM 8 O4' U B 56 5.563 4.152 -2.332 1.00 44.09 O
ATOM 9 C3' U B 56 5.948 3.670 -0.038 1.00 43.66 C
ATOM 10 O3' U B 56 4.761 3.384 0.698 1.00 44.32 O
ATOM 11 C2' U B 56 6.528 2.518 -0.860 1.00 43.70 C
ATOM 12 O2' U B 56 6.096 1.244 -0.438 1.00 43.08 O
ATOM 13 C1' U B 56 5.900 2.791 -2.223 1.00 44.82 C
ATOM 14 N1 U B 56 6.549 2.317 -3.448 1.00 47.74 N
ATOM 15 C2 U B 56 5.925 1.265 -4.095 1.00 49.78 C
ATOM 16 O2 U B 56 4.892 0.764 -3.690 1.00 49.28 O
ATOM 17 N3 U B 56 6.551 0.824 -5.233 1.00 51.91 N
ATOM 18 C4 U B 56 7.713 1.317 -5.781 1.00 52.85 C
ATOM 19 O4 U B 56 8.155 0.804 -6.808 1.00 54.55 O
ATOM 20 C5 U B 56 8.303 2.413 -5.056 1.00 52.05 C
ATOM 21 C6 U B 56 7.710 2.865 -3.939 1.00 49.97 C
ATOM 22 P U B 57 4.830 2.954 2.239 1.00 45.67 P
ATOM 23 OP1 U B 57 4.855 4.204 3.042 1.00 47.27 O
ATOM 24 OP2 U B 57 5.888 1.932 2.426 1.00 45.93 O
ATOM 25 O5' U B 57 3.427 2.239 2.478 1.00 46.15 O
TER
Atoms:
OP1: (11.003,12.033,-6.565)
OP2: (9.174,11.978,-4.754)
C3': (10.966,7.483,-7.442)
C1': (13.115,6.522,-7.227)
C5': (11.316,8.948,-5.277)
O6: (13.910,0.873,-5.417)
O4': (12.994,7.549,-6.265)
C8: (12.523,4.929,-5.336)
C2: (14.863,2.741,-8.298)
C6: (14.000,1.845,-6.178)
C5: (13.474,3.148,-6.008)
C4: (13.700,4.089,-6.991)
P: (10.454,11.458,-5.306)
C4': (11.856,8.390,-6.587)
C2': (11.994,6.699,-8.247)
O2': (12.487,7.448,-9.343)
N1: (14.696,1.729,-7.378)
N2: (15.569,2.446,-9.399)
N3: (14.375,3.955,-8.150)
N7: (12.728,3.690,-4.971)
N9: (13.100,5.236,-6.544)
O5': (10.266,9.881,-5.513)
O3': (10.173,8.222,-8.368)
OP2: (9.174,11.978,-4.754)
C3': (10.966,7.483,-7.442)
C1': (13.115,6.522,-7.227)
C5': (11.316,8.948,-5.277)
O6: (13.910,0.873,-5.417)
O4': (12.994,7.549,-6.265)
C8: (12.523,4.929,-5.336)
C2: (14.863,2.741,-8.298)
C6: (14.000,1.845,-6.178)
C5: (13.474,3.148,-6.008)
C4: (13.700,4.089,-6.991)
P: (10.454,11.458,-5.306)
C4': (11.856,8.390,-6.587)
C2': (11.994,6.699,-8.247)
O2': (12.487,7.448,-9.343)
N1: (14.696,1.729,-7.378)
N2: (15.569,2.446,-9.399)
N3: (14.375,3.955,-8.150)
N7: (12.728,3.690,-4.971)
N9: (13.100,5.236,-6.544)
O5': (10.266,9.881,-5.513)
O3': (10.173,8.222,-8.368)
C4: (7.713,1.317,-5.781)
N3: (6.551,0.824,-5.233)
OP1: (9.747,5.599,-3.414)
OP2: (8.101,7.514,-2.934)
C2: (5.925,1.265,-4.095)
C1': (5.900,2.791,-2.223)
C3': (5.948,3.670,-0.038)
O5': (7.939,5.348,-1.694)
O4': (5.563,4.152,-2.332)
C5': (6.773,5.834,-1.042)
P: (8.911,6.366,-2.447)
C4': (5.667,4.794,-1.031)
C2': (6.528,2.518,-0.860)
O2': (6.096,1.244,-0.438)
N1: (6.549,2.317,-3.448)
O4: (8.155,0.804,-6.808)
O2: (4.892,0.764,-3.690)
C6: (7.710,2.865,-3.939)
C5: (8.303,2.413,-5.056)
O3': (4.761,3.384,0.698)
N3: (6.551,0.824,-5.233)
OP1: (9.747,5.599,-3.414)
OP2: (8.101,7.514,-2.934)
C2: (5.925,1.265,-4.095)
C1': (5.900,2.791,-2.223)
C3': (5.948,3.670,-0.038)
O5': (7.939,5.348,-1.694)
O4': (5.563,4.152,-2.332)
C5': (6.773,5.834,-1.042)
P: (8.911,6.366,-2.447)
C4': (5.667,4.794,-1.031)
C2': (6.528,2.518,-0.860)
O2': (6.096,1.244,-0.438)
N1: (6.549,2.317,-3.448)
O4: (8.155,0.804,-6.808)
O2: (4.892,0.764,-3.690)
C6: (7.710,2.865,-3.939)
C5: (8.303,2.413,-5.056)
O3': (4.761,3.384,0.698)
Image (generated by PyMOL):