Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11061:1898
Extra
PDB:
ATOM 1 O3' G A1060 41.689 -19.760 55.389 1.00 32.02 O
ATOM 2 P G A1061 41.163 -21.126 54.786 1.00 30.16 P
ATOM 3 OP1 G A1061 39.817 -21.194 55.140 1.00 30.16 O
ATOM 4 OP2 G A1061 42.065 -22.244 55.194 1.00 30.22 O
ATOM 5 O5' G A1061 41.274 -20.915 53.236 1.00 30.27 O
ATOM 6 C5' G A1061 42.531 -20.954 52.609 1.00 30.31 C
ATOM 7 C4' G A1061 43.004 -19.562 52.376 1.00 30.22 C
ATOM 8 O4' G A1061 44.424 -19.491 52.519 1.00 30.20 O
ATOM 9 C3' G A1061 42.712 -18.980 51.003 1.00 30.31 C
ATOM 10 O3' G A1061 41.395 -18.472 50.942 1.00 30.29 O
ATOM 11 C2' G A1061 43.745 -17.891 50.914 1.00 30.24 C
ATOM 12 O2' G A1061 43.328 -16.796 51.703 1.00 30.10 O
ATOM 13 C1' G A1061 44.933 -18.557 51.608 1.00 30.22 C
ATOM 14 N9 G A1061 45.775 -19.282 50.671 1.00 30.36 N
ATOM 15 C8 G A1061 45.891 -20.613 50.605 1.00 30.47 C
ATOM 16 N7 G A1061 46.735 -20.919 49.689 1.00 30.59 N
ATOM 17 C5 G A1061 47.172 -19.729 49.164 1.00 30.55 C
ATOM 18 C6 G A1061 48.083 -19.443 48.162 1.00 30.65 C
ATOM 19 O6 G A1061 48.726 -20.227 47.492 1.00 30.80 O
ATOM 20 N1 G A1061 48.235 -18.112 47.947 1.00 30.58 N
ATOM 21 C2 G A1061 47.603 -17.146 48.646 1.00 30.44 C
ATOM 22 N2 G A1061 47.888 -15.892 48.306 1.00 30.41 N
ATOM 23 N3 G A1061 46.747 -17.390 49.606 1.00 30.34 N
ATOM 24 C4 G A1061 46.597 -18.702 49.786 1.00 30.41 C
ATOM 25 P C A1062 40.495 -18.553 49.617 1.00 28.37 P
ATOM 26 OP1 C A1062 39.213 -17.944 50.000 1.00 28.32 O
ATOM 27 OP2 C A1062 40.515 -19.947 49.125 1.00 28.52 O
ATOM 28 O5' C A1062 41.269 -17.585 48.583 1.00 28.41 O
TER
ATOM 1 O3' G B 897 44.331 -24.545 53.248 1.00 33.74 O
ATOM 2 P U B 898 43.463 -24.939 51.909 1.00 36.32 P
ATOM 3 OP1 U B 898 43.913 -24.080 50.784 1.00 36.34 O
ATOM 4 OP2 U B 898 42.058 -24.896 52.327 1.00 36.28 O
ATOM 5 O5' U B 898 43.871 -26.441 51.618 1.00 36.52 O
ATOM 6 C5' U B 898 43.390 -27.494 52.394 1.00 36.57 C
ATOM 7 C4' U B 898 44.208 -28.721 52.143 1.00 36.75 C
ATOM 8 O4' U B 898 45.610 -28.444 52.394 1.00 36.70 O
ATOM 9 C3' U B 898 43.899 -29.927 53.013 1.00 36.84 C
ATOM 10 O3' U B 898 42.807 -30.657 52.528 1.00 36.98 O
ATOM 11 C2' U B 898 45.184 -30.713 52.954 1.00 36.96 C
ATOM 12 O2' U B 898 45.214 -31.467 51.750 1.00 37.18 O
ATOM 13 C1' U B 898 46.242 -29.598 52.883 1.00 36.82 C
ATOM 14 N1 U B 898 46.830 -29.282 54.225 1.00 36.68 N
ATOM 15 C2 U B 898 47.654 -30.188 54.832 1.00 36.78 C
ATOM 16 O2 U B 898 47.893 -31.216 54.259 1.00 36.98 O
ATOM 17 N3 U B 898 48.162 -29.894 56.078 1.00 36.67 N
ATOM 18 C4 U B 898 48.010 -28.723 56.782 1.00 36.47 C
ATOM 19 O4 U B 898 48.530 -28.543 57.889 1.00 36.40 O
ATOM 20 C5 U B 898 47.168 -27.798 56.095 1.00 36.37 C
ATOM 21 C6 U B 898 46.603 -28.103 54.902 1.00 36.48 C
ATOM 22 P U B 899 41.645 -31.137 53.506 1.00 34.46 P
ATOM 23 OP1 U B 899 40.448 -31.366 52.653 1.00 34.58 O
ATOM 24 OP2 U B 899 41.553 -30.163 54.613 1.00 34.23 O
ATOM 25 O5' U B 899 42.207 -32.528 54.049 1.00 34.62 O
TER
ATOM 2 P G A1061 41.163 -21.126 54.786 1.00 30.16 P
ATOM 3 OP1 G A1061 39.817 -21.194 55.140 1.00 30.16 O
ATOM 4 OP2 G A1061 42.065 -22.244 55.194 1.00 30.22 O
ATOM 5 O5' G A1061 41.274 -20.915 53.236 1.00 30.27 O
ATOM 6 C5' G A1061 42.531 -20.954 52.609 1.00 30.31 C
ATOM 7 C4' G A1061 43.004 -19.562 52.376 1.00 30.22 C
ATOM 8 O4' G A1061 44.424 -19.491 52.519 1.00 30.20 O
ATOM 9 C3' G A1061 42.712 -18.980 51.003 1.00 30.31 C
ATOM 10 O3' G A1061 41.395 -18.472 50.942 1.00 30.29 O
ATOM 11 C2' G A1061 43.745 -17.891 50.914 1.00 30.24 C
ATOM 12 O2' G A1061 43.328 -16.796 51.703 1.00 30.10 O
ATOM 13 C1' G A1061 44.933 -18.557 51.608 1.00 30.22 C
ATOM 14 N9 G A1061 45.775 -19.282 50.671 1.00 30.36 N
ATOM 15 C8 G A1061 45.891 -20.613 50.605 1.00 30.47 C
ATOM 16 N7 G A1061 46.735 -20.919 49.689 1.00 30.59 N
ATOM 17 C5 G A1061 47.172 -19.729 49.164 1.00 30.55 C
ATOM 18 C6 G A1061 48.083 -19.443 48.162 1.00 30.65 C
ATOM 19 O6 G A1061 48.726 -20.227 47.492 1.00 30.80 O
ATOM 20 N1 G A1061 48.235 -18.112 47.947 1.00 30.58 N
ATOM 21 C2 G A1061 47.603 -17.146 48.646 1.00 30.44 C
ATOM 22 N2 G A1061 47.888 -15.892 48.306 1.00 30.41 N
ATOM 23 N3 G A1061 46.747 -17.390 49.606 1.00 30.34 N
ATOM 24 C4 G A1061 46.597 -18.702 49.786 1.00 30.41 C
ATOM 25 P C A1062 40.495 -18.553 49.617 1.00 28.37 P
ATOM 26 OP1 C A1062 39.213 -17.944 50.000 1.00 28.32 O
ATOM 27 OP2 C A1062 40.515 -19.947 49.125 1.00 28.52 O
ATOM 28 O5' C A1062 41.269 -17.585 48.583 1.00 28.41 O
TER
ATOM 1 O3' G B 897 44.331 -24.545 53.248 1.00 33.74 O
ATOM 2 P U B 898 43.463 -24.939 51.909 1.00 36.32 P
ATOM 3 OP1 U B 898 43.913 -24.080 50.784 1.00 36.34 O
ATOM 4 OP2 U B 898 42.058 -24.896 52.327 1.00 36.28 O
ATOM 5 O5' U B 898 43.871 -26.441 51.618 1.00 36.52 O
ATOM 6 C5' U B 898 43.390 -27.494 52.394 1.00 36.57 C
ATOM 7 C4' U B 898 44.208 -28.721 52.143 1.00 36.75 C
ATOM 8 O4' U B 898 45.610 -28.444 52.394 1.00 36.70 O
ATOM 9 C3' U B 898 43.899 -29.927 53.013 1.00 36.84 C
ATOM 10 O3' U B 898 42.807 -30.657 52.528 1.00 36.98 O
ATOM 11 C2' U B 898 45.184 -30.713 52.954 1.00 36.96 C
ATOM 12 O2' U B 898 45.214 -31.467 51.750 1.00 37.18 O
ATOM 13 C1' U B 898 46.242 -29.598 52.883 1.00 36.82 C
ATOM 14 N1 U B 898 46.830 -29.282 54.225 1.00 36.68 N
ATOM 15 C2 U B 898 47.654 -30.188 54.832 1.00 36.78 C
ATOM 16 O2 U B 898 47.893 -31.216 54.259 1.00 36.98 O
ATOM 17 N3 U B 898 48.162 -29.894 56.078 1.00 36.67 N
ATOM 18 C4 U B 898 48.010 -28.723 56.782 1.00 36.47 C
ATOM 19 O4 U B 898 48.530 -28.543 57.889 1.00 36.40 O
ATOM 20 C5 U B 898 47.168 -27.798 56.095 1.00 36.37 C
ATOM 21 C6 U B 898 46.603 -28.103 54.902 1.00 36.48 C
ATOM 22 P U B 899 41.645 -31.137 53.506 1.00 34.46 P
ATOM 23 OP1 U B 899 40.448 -31.366 52.653 1.00 34.58 O
ATOM 24 OP2 U B 899 41.553 -30.163 54.613 1.00 34.23 O
ATOM 25 O5' U B 899 42.207 -32.528 54.049 1.00 34.62 O
TER
Atoms:
OP1: (39.817,-21.194,55.140)
OP2: (42.065,-22.244,55.194)
C3': (42.712,-18.980,51.003)
C1': (44.933,-18.557,51.608)
C5': (42.531,-20.954,52.609)
O6: (48.726,-20.227,47.492)
O4': (44.424,-19.491,52.519)
C8: (45.891,-20.613,50.605)
C2: (47.603,-17.146,48.646)
C6: (48.083,-19.443,48.162)
C5: (47.172,-19.729,49.164)
C4: (46.597,-18.702,49.786)
P: (41.163,-21.126,54.786)
C4': (43.004,-19.562,52.376)
C2': (43.745,-17.891,50.914)
O2': (43.328,-16.796,51.703)
N1: (48.235,-18.112,47.947)
N2: (47.888,-15.892,48.306)
N3: (46.747,-17.390,49.606)
N7: (46.735,-20.919,49.689)
N9: (45.775,-19.282,50.671)
O5': (41.274,-20.915,53.236)
O3': (41.395,-18.472,50.942)
OP2: (42.065,-22.244,55.194)
C3': (42.712,-18.980,51.003)
C1': (44.933,-18.557,51.608)
C5': (42.531,-20.954,52.609)
O6: (48.726,-20.227,47.492)
O4': (44.424,-19.491,52.519)
C8: (45.891,-20.613,50.605)
C2: (47.603,-17.146,48.646)
C6: (48.083,-19.443,48.162)
C5: (47.172,-19.729,49.164)
C4: (46.597,-18.702,49.786)
P: (41.163,-21.126,54.786)
C4': (43.004,-19.562,52.376)
C2': (43.745,-17.891,50.914)
O2': (43.328,-16.796,51.703)
N1: (48.235,-18.112,47.947)
N2: (47.888,-15.892,48.306)
N3: (46.747,-17.390,49.606)
N7: (46.735,-20.919,49.689)
N9: (45.775,-19.282,50.671)
O5': (41.274,-20.915,53.236)
O3': (41.395,-18.472,50.942)
C4: (48.010,-28.723,56.782)
N3: (48.162,-29.894,56.078)
OP1: (43.913,-24.080,50.784)
OP2: (42.058,-24.896,52.327)
C2: (47.654,-30.188,54.832)
C1': (46.242,-29.598,52.883)
C3': (43.899,-29.927,53.013)
O5': (43.871,-26.441,51.618)
O4': (45.610,-28.444,52.394)
C5': (43.390,-27.494,52.394)
P: (43.463,-24.939,51.909)
C4': (44.208,-28.721,52.143)
C2': (45.184,-30.713,52.954)
O2': (45.214,-31.467,51.750)
N1: (46.830,-29.282,54.225)
O4: (48.530,-28.543,57.889)
O2: (47.893,-31.216,54.259)
C6: (46.603,-28.103,54.902)
C5: (47.168,-27.798,56.095)
O3': (42.807,-30.657,52.528)
N3: (48.162,-29.894,56.078)
OP1: (43.913,-24.080,50.784)
OP2: (42.058,-24.896,52.327)
C2: (47.654,-30.188,54.832)
C1': (46.242,-29.598,52.883)
C3': (43.899,-29.927,53.013)
O5': (43.871,-26.441,51.618)
O4': (45.610,-28.444,52.394)
C5': (43.390,-27.494,52.394)
P: (43.463,-24.939,51.909)
C4': (44.208,-28.721,52.143)
C2': (45.184,-30.713,52.954)
O2': (45.214,-31.467,51.750)
N1: (46.830,-29.282,54.225)
O4: (48.530,-28.543,57.889)
O2: (47.893,-31.216,54.259)
C6: (46.603,-28.103,54.902)
C5: (47.168,-27.798,56.095)
O3': (42.807,-30.657,52.528)
Image (generated by PyMOL):