Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:484:485
Extra
PDB:
ATOM 1 O3' C A 83 103.078 13.532 137.885 1.00 88.31 O
ATOM 2 P G A 84 101.946 13.669 139.023 1.00 84.09 P
ATOM 3 OP1 G A 84 102.296 14.850 139.854 1.00 85.19 O
ATOM 4 OP2 G A 84 101.835 12.343 139.681 1.00 84.05 O
ATOM 5 O5' G A 84 100.627 13.975 138.180 1.00 82.93 O
ATOM 6 C5' G A 84 99.801 15.086 138.498 1.00 83.03 C
ATOM 7 C4' G A 84 98.356 14.707 138.419 1.00 82.10 C
ATOM 8 O4' G A 84 97.897 14.860 137.028 1.00 81.03 O
ATOM 9 C3' G A 84 98.073 13.248 138.721 1.00 81.69 C
ATOM 10 O3' G A 84 98.083 12.859 140.119 1.00 82.48 O
ATOM 11 C2' G A 84 96.821 12.965 137.877 1.00 80.44 C
ATOM 12 O2' G A 84 95.694 13.666 138.385 1.00 80.41 O
ATOM 13 C1' G A 84 97.242 13.677 136.596 1.00 80.07 C
ATOM 14 N9 G A 84 98.235 12.896 135.812 1.00 79.86 N
ATOM 15 C8 G A 84 99.074 11.910 136.289 1.00 80.31 C
ATOM 16 N7 G A 84 99.919 11.414 135.454 1.00 80.11 N
ATOM 17 C5 G A 84 99.656 12.134 134.315 1.00 79.50 C
ATOM 18 C6 G A 84 100.293 12.000 133.073 1.00 79.08 C
ATOM 19 O6 G A 84 101.192 11.198 132.818 1.00 79.20 O
ATOM 20 N1 G A 84 99.781 12.876 132.128 1.00 78.50 N
ATOM 21 C2 G A 84 98.776 13.772 132.376 1.00 78.37 C
ATOM 22 N2 G A 84 98.416 14.538 131.337 1.00 77.81 N
ATOM 23 N3 G A 84 98.177 13.910 133.556 1.00 78.78 N
ATOM 24 C4 G A 84 98.650 13.060 134.497 1.00 79.34 C
ATOM 25 P U A 85 96.931 13.251 141.171 1.00104.15 P
ATOM 26 OP1 U A 85 96.611 14.672 140.976 1.00104.31 O
ATOM 27 OP2 U A 85 97.398 12.821 142.489 1.00105.13 O
ATOM 28 O5' U A 85 95.714 12.333 140.710 1.00102.96 O
TER
ATOM 1 O3' G B 84 98.083 12.859 140.119 1.00 82.48 O
ATOM 2 P U B 85 96.931 13.251 141.171 1.00104.15 P
ATOM 3 OP1 U B 85 96.611 14.672 140.976 1.00104.31 O
ATOM 4 OP2 U B 85 97.398 12.821 142.489 1.00105.13 O
ATOM 5 O5' U B 85 95.714 12.333 140.710 1.00102.96 O
ATOM 6 C5' U B 85 94.374 12.592 141.131 1.00102.67 C
ATOM 7 C4' U B 85 93.402 11.590 140.531 1.00101.52 C
ATOM 8 O4' U B 85 93.290 10.423 141.395 1.00101.70 O
ATOM 9 C3' U B 85 91.967 12.063 140.360 1.00100.88 C
ATOM 10 O3' U B 85 91.780 12.850 139.205 1.00100.28 O
ATOM 11 C2' U B 85 91.166 10.756 140.361 1.00100.15 C
ATOM 12 O2' U B 85 91.188 10.124 139.077 1.00 99.16 O
ATOM 13 C1' U B 85 91.975 9.903 141.347 1.00100.91 C
ATOM 14 N1 U B 85 91.406 9.923 142.723 1.00101.57 N
ATOM 15 C2 U B 85 90.429 8.982 143.011 1.00101.07 C
ATOM 16 O2 U B 85 90.019 8.179 142.175 1.00100.13 O
ATOM 17 N3 U B 85 89.939 9.012 144.299 1.00101.74 N
ATOM 18 C4 U B 85 90.316 9.877 145.310 1.00102.84 C
ATOM 19 O4 U B 85 89.775 9.776 146.420 1.00103.35 O
ATOM 20 C5 U B 85 91.335 10.824 144.932 1.00103.30 C
ATOM 21 C6 U B 85 91.833 10.813 143.688 1.00102.67 C
ATOM 22 P G B 86 91.521 14.430 139.346 1.00 85.76 P
ATOM 23 OP1 G B 86 92.778 15.046 139.878 1.00 86.87 O
ATOM 24 OP2 G B 86 90.268 14.602 140.118 1.00 85.76 O
ATOM 25 O5' G B 86 91.285 14.872 137.829 1.00 84.81 O
TER
ATOM 2 P G A 84 101.946 13.669 139.023 1.00 84.09 P
ATOM 3 OP1 G A 84 102.296 14.850 139.854 1.00 85.19 O
ATOM 4 OP2 G A 84 101.835 12.343 139.681 1.00 84.05 O
ATOM 5 O5' G A 84 100.627 13.975 138.180 1.00 82.93 O
ATOM 6 C5' G A 84 99.801 15.086 138.498 1.00 83.03 C
ATOM 7 C4' G A 84 98.356 14.707 138.419 1.00 82.10 C
ATOM 8 O4' G A 84 97.897 14.860 137.028 1.00 81.03 O
ATOM 9 C3' G A 84 98.073 13.248 138.721 1.00 81.69 C
ATOM 10 O3' G A 84 98.083 12.859 140.119 1.00 82.48 O
ATOM 11 C2' G A 84 96.821 12.965 137.877 1.00 80.44 C
ATOM 12 O2' G A 84 95.694 13.666 138.385 1.00 80.41 O
ATOM 13 C1' G A 84 97.242 13.677 136.596 1.00 80.07 C
ATOM 14 N9 G A 84 98.235 12.896 135.812 1.00 79.86 N
ATOM 15 C8 G A 84 99.074 11.910 136.289 1.00 80.31 C
ATOM 16 N7 G A 84 99.919 11.414 135.454 1.00 80.11 N
ATOM 17 C5 G A 84 99.656 12.134 134.315 1.00 79.50 C
ATOM 18 C6 G A 84 100.293 12.000 133.073 1.00 79.08 C
ATOM 19 O6 G A 84 101.192 11.198 132.818 1.00 79.20 O
ATOM 20 N1 G A 84 99.781 12.876 132.128 1.00 78.50 N
ATOM 21 C2 G A 84 98.776 13.772 132.376 1.00 78.37 C
ATOM 22 N2 G A 84 98.416 14.538 131.337 1.00 77.81 N
ATOM 23 N3 G A 84 98.177 13.910 133.556 1.00 78.78 N
ATOM 24 C4 G A 84 98.650 13.060 134.497 1.00 79.34 C
ATOM 25 P U A 85 96.931 13.251 141.171 1.00104.15 P
ATOM 26 OP1 U A 85 96.611 14.672 140.976 1.00104.31 O
ATOM 27 OP2 U A 85 97.398 12.821 142.489 1.00105.13 O
ATOM 28 O5' U A 85 95.714 12.333 140.710 1.00102.96 O
TER
ATOM 1 O3' G B 84 98.083 12.859 140.119 1.00 82.48 O
ATOM 2 P U B 85 96.931 13.251 141.171 1.00104.15 P
ATOM 3 OP1 U B 85 96.611 14.672 140.976 1.00104.31 O
ATOM 4 OP2 U B 85 97.398 12.821 142.489 1.00105.13 O
ATOM 5 O5' U B 85 95.714 12.333 140.710 1.00102.96 O
ATOM 6 C5' U B 85 94.374 12.592 141.131 1.00102.67 C
ATOM 7 C4' U B 85 93.402 11.590 140.531 1.00101.52 C
ATOM 8 O4' U B 85 93.290 10.423 141.395 1.00101.70 O
ATOM 9 C3' U B 85 91.967 12.063 140.360 1.00100.88 C
ATOM 10 O3' U B 85 91.780 12.850 139.205 1.00100.28 O
ATOM 11 C2' U B 85 91.166 10.756 140.361 1.00100.15 C
ATOM 12 O2' U B 85 91.188 10.124 139.077 1.00 99.16 O
ATOM 13 C1' U B 85 91.975 9.903 141.347 1.00100.91 C
ATOM 14 N1 U B 85 91.406 9.923 142.723 1.00101.57 N
ATOM 15 C2 U B 85 90.429 8.982 143.011 1.00101.07 C
ATOM 16 O2 U B 85 90.019 8.179 142.175 1.00100.13 O
ATOM 17 N3 U B 85 89.939 9.012 144.299 1.00101.74 N
ATOM 18 C4 U B 85 90.316 9.877 145.310 1.00102.84 C
ATOM 19 O4 U B 85 89.775 9.776 146.420 1.00103.35 O
ATOM 20 C5 U B 85 91.335 10.824 144.932 1.00103.30 C
ATOM 21 C6 U B 85 91.833 10.813 143.688 1.00102.67 C
ATOM 22 P G B 86 91.521 14.430 139.346 1.00 85.76 P
ATOM 23 OP1 G B 86 92.778 15.046 139.878 1.00 86.87 O
ATOM 24 OP2 G B 86 90.268 14.602 140.118 1.00 85.76 O
ATOM 25 O5' G B 86 91.285 14.872 137.829 1.00 84.81 O
TER
Atoms:
OP1: (102.296,14.850,139.854)
OP2: (101.835,12.343,139.681)
C3': (98.073,13.248,138.721)
C1': (97.242,13.677,136.596)
C5': (99.801,15.086,138.498)
O6: (101.192,11.198,132.818)
O4': (97.897,14.860,137.028)
C8: (99.074,11.910,136.289)
C2: (98.776,13.772,132.376)
C6: (100.293,12.000,133.073)
C5: (99.656,12.134,134.315)
C4: (98.650,13.060,134.497)
P: (101.946,13.669,139.023)
C4': (98.356,14.707,138.419)
C2': (96.821,12.965,137.877)
O2': (95.694,13.666,138.385)
N1: (99.781,12.876,132.128)
N2: (98.416,14.538,131.337)
N3: (98.177,13.910,133.556)
N7: (99.919,11.414,135.454)
N9: (98.235,12.896,135.812)
O5': (100.627,13.975,138.180)
O3': (98.083,12.859,140.119)
OP2: (101.835,12.343,139.681)
C3': (98.073,13.248,138.721)
C1': (97.242,13.677,136.596)
C5': (99.801,15.086,138.498)
O6: (101.192,11.198,132.818)
O4': (97.897,14.860,137.028)
C8: (99.074,11.910,136.289)
C2: (98.776,13.772,132.376)
C6: (100.293,12.000,133.073)
C5: (99.656,12.134,134.315)
C4: (98.650,13.060,134.497)
P: (101.946,13.669,139.023)
C4': (98.356,14.707,138.419)
C2': (96.821,12.965,137.877)
O2': (95.694,13.666,138.385)
N1: (99.781,12.876,132.128)
N2: (98.416,14.538,131.337)
N3: (98.177,13.910,133.556)
N7: (99.919,11.414,135.454)
N9: (98.235,12.896,135.812)
O5': (100.627,13.975,138.180)
O3': (98.083,12.859,140.119)
C4: (90.316,9.877,145.310)
N3: (89.939,9.012,144.299)
OP1: (96.611,14.672,140.976)
OP2: (97.398,12.821,142.489)
C2: (90.429,8.982,143.011)
C1': (91.975,9.903,141.347)
C3': (91.967,12.063,140.360)
O5': (95.714,12.333,140.710)
O4': (93.290,10.423,141.395)
C5': (94.374,12.592,141.131)
P: (96.931,13.251,141.171)
C4': (93.402,11.590,140.531)
C2': (91.166,10.756,140.361)
O2': (91.188,10.124,139.077)
N1: (91.406,9.923,142.723)
O4: (89.775,9.776,146.420)
O2: (90.019,8.179,142.175)
C6: (91.833,10.813,143.688)
C5: (91.335,10.824,144.932)
O3': (91.780,12.850,139.205)
N3: (89.939,9.012,144.299)
OP1: (96.611,14.672,140.976)
OP2: (97.398,12.821,142.489)
C2: (90.429,8.982,143.011)
C1': (91.975,9.903,141.347)
C3': (91.967,12.063,140.360)
O5': (95.714,12.333,140.710)
O4': (93.290,10.423,141.395)
C5': (94.374,12.592,141.131)
P: (96.931,13.251,141.171)
C4': (93.402,11.590,140.531)
C2': (91.166,10.756,140.361)
O2': (91.188,10.124,139.077)
N1: (91.406,9.923,142.723)
O4: (89.775,9.776,146.420)
O2: (90.019,8.179,142.175)
C6: (91.833,10.813,143.688)
C5: (91.335,10.824,144.932)
O3': (91.780,12.850,139.205)
Image (generated by PyMOL):