ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQO:943:938

Extra

PDB:
ATOM 1 O3' G A 42 84.275 16.524 96.065 1.00 64.54 O
ATOM 2 P A A 43 84.244 16.129 97.625 1.00 64.57 P
ATOM 3 OP1 A A 43 85.544 15.542 98.049 1.00 65.60 O
ATOM 4 OP2 A A 43 82.994 15.363 97.840 1.00 63.47 O
ATOM 5 O5' A A 43 84.078 17.540 98.343 1.00 62.91 O
ATOM 6 C5' A A 43 83.592 17.645 99.690 1.00 62.93 C
ATOM 7 C4' A A 43 83.230 19.079 99.991 1.00 63.06 C
ATOM 8 O4' A A 43 84.413 19.903 99.810 1.00 63.59 O
ATOM 9 C3' A A 43 82.205 19.696 99.050 1.00 63.11 C
ATOM 10 O3' A A 43 80.878 19.388 99.455 1.00 62.96 O
ATOM 11 C2' A A 43 82.525 21.182 99.150 1.00 62.16 C
ATOM 12 O2' A A 43 82.016 21.782 100.323 1.00 61.09 O
ATOM 13 C1' A A 43 84.054 21.148 99.232 1.00 61.62 C
ATOM 14 N9 A A 43 84.699 21.245 97.920 1.00 60.35 N
ATOM 15 C8 A A 43 85.311 20.250 97.196 1.00 60.16 C
ATOM 16 N7 A A 43 85.771 20.647 96.035 1.00 59.67 N
ATOM 17 C5 A A 43 85.446 21.994 95.993 1.00 59.66 C
ATOM 18 C6 A A 43 85.651 22.984 95.021 1.00 59.34 C
ATOM 19 N6 A A 43 86.252 22.761 93.855 1.00 58.11 N
ATOM 20 N1 A A 43 85.206 24.230 95.290 1.00 60.43 N
ATOM 21 C2 A A 43 84.593 24.454 96.460 1.00 59.77 C
ATOM 22 N3 A A 43 84.337 23.607 97.450 1.00 59.18 N
ATOM 23 C4 A A 43 84.794 22.379 97.151 1.00 59.85 C
ATOM 24 P A A 44 79.778 18.992 98.354 1.00 63.55 P
ATOM 25 OP1 A A 44 78.521 18.704 99.094 1.00 63.59 O
ATOM 26 OP2 A A 44 80.343 17.961 97.435 1.00 62.04 O
ATOM 27 O5' A A 44 79.572 20.334 97.520 1.00 63.74 O
TER

ATOM 1 O3' A B 37 85.539 24.429 86.855 1.00 65.89 O
ATOM 2 P U B 38 87.062 24.847 86.541 1.00 69.72 P
ATOM 3 OP1 U B 38 87.022 26.033 85.649 1.00 71.30 O
ATOM 4 OP2 U B 38 87.855 23.653 86.137 1.00 70.59 O
ATOM 5 O5' U B 38 87.613 25.337 87.946 1.00 69.24 O
ATOM 6 C5' U B 38 86.775 26.075 88.836 1.00 71.26 C
ATOM 7 C4' U B 38 87.004 25.611 90.245 1.00 72.56 C
ATOM 8 O4' U B 38 86.859 24.174 90.273 1.00 72.92 O
ATOM 9 C3' U B 38 88.396 25.859 90.805 1.00 74.21 C
ATOM 10 O3' U B 38 88.409 27.227 91.275 1.00 75.77 O
ATOM 11 C2' U B 38 88.506 24.782 91.889 1.00 74.14 C
ATOM 12 O2' U B 38 87.845 25.171 93.075 1.00 76.64 O
ATOM 13 C1' U B 38 87.670 23.642 91.295 1.00 71.91 C
ATOM 14 N1 U B 38 88.299 22.399 90.813 1.00 69.65 N
ATOM 15 C2 U B 38 88.635 21.427 91.751 1.00 68.96 C
ATOM 16 O2 U B 38 88.540 21.596 92.957 1.00 69.82 O
ATOM 17 N3 U B 38 89.090 20.245 91.221 1.00 66.89 N
ATOM 18 C4 U B 38 89.254 19.943 89.886 1.00 67.20 C
ATOM 19 O4 U B 38 89.633 18.820 89.564 1.00 64.67 O
ATOM 20 C5 U B 38 88.951 21.014 88.988 1.00 67.80 C
ATOM 21 C6 U B 38 88.500 22.176 89.469 1.00 68.99 C
ATOM 22 P C B 39 89.489 27.727 92.364 1.00 76.89 P
ATOM 23 OP1 C B 39 90.086 26.546 93.031 1.00 79.19 O
ATOM 24 OP2 C B 39 88.817 28.762 93.185 1.00 76.96 O
ATOM 25 O5' C B 39 90.647 28.438 91.527 1.00 76.79 O
TER

Atoms:
OP1: (85.544,15.542,98.049)
OP2: (82.994,15.363,97.840)
C3': (82.205,19.696,99.050)
C1': (84.054,21.148,99.232)
C5': (83.592,17.645,99.690)
O4': (84.413,19.903,99.810)
C8: (85.311,20.250,97.196)
O2': (82.016,21.782,100.323)
C6: (85.651,22.984,95.021)
C5: (85.446,21.994,95.993)
C4: (84.794,22.379,97.151)
P: (84.244,16.129,97.625)
C4': (83.230,19.079,99.991)
C2': (82.525,21.182,99.150)
C2: (84.593,24.454,96.460)
N1: (85.206,24.230,95.290)
N3: (84.337,23.607,97.450)
N6: (86.252,22.761,93.855)
N7: (85.771,20.647,96.035)
N9: (84.699,21.245,97.920)
O5': (84.078,17.540,98.343)
O3': (80.878,19.388,99.455)
C4: (89.254,19.943,89.886)
N3: (89.090,20.245,91.221)
OP1: (87.022,26.033,85.649)
OP2: (87.855,23.653,86.137)
C2: (88.635,21.427,91.751)
C1': (87.670,23.642,91.295)
C3': (88.396,25.859,90.805)
O5': (87.613,25.337,87.946)
O4': (86.859,24.174,90.273)
C5': (86.775,26.075,88.836)
P: (87.062,24.847,86.541)
C4': (87.004,25.611,90.245)
C2': (88.506,24.782,91.889)
O2': (87.845,25.171,93.075)
N1: (88.299,22.399,90.813)
O4: (89.633,18.820,89.564)
O2: (88.540,21.596,92.957)
C6: (88.500,22.176,89.469)
C5: (88.951,21.014,88.988)
O3': (88.409,27.227,91.275)
Image (generated by PyMOL):
PyMOL image
show in jmol