Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OXB:A4:A83
Extra
PDB:
ATOM 1 O3' U A 3 10.254 -28.034 -3.912 1.00114.60 O
ATOM 2 P C A 4 10.670 -28.723 -2.523 1.00111.12 P
ATOM 3 OP1 C A 4 12.129 -28.973 -2.566 1.00110.78 O
ATOM 4 OP2 C A 4 9.752 -29.848 -2.231 1.00109.50 O
ATOM 5 O5' C A 4 10.377 -27.558 -1.470 1.00109.52 O
ATOM 6 C5' C A 4 10.840 -26.236 -1.722 1.00109.92 C
ATOM 7 C4' C A 4 10.040 -25.213 -0.941 1.00109.10 C
ATOM 8 O4' C A 4 8.713 -25.085 -1.506 1.00110.27 O
ATOM 9 C3' C A 4 9.758 -25.560 0.512 1.00106.20 C
ATOM 10 O3' C A 4 10.882 -25.321 1.336 1.00104.64 O
ATOM 11 C2' C A 4 8.625 -24.591 0.805 1.00107.20 C
ATOM 12 O2' C A 4 9.065 -23.264 1.005 1.00108.50 O
ATOM 13 C1' C A 4 7.810 -24.698 -0.480 1.00109.45 C
ATOM 14 N1 C A 4 6.655 -25.663 -0.319 1.00109.00 N
ATOM 15 C2 C A 4 6.720 -27.028 -0.690 1.00108.80 C
ATOM 16 O2 C A 4 7.742 -27.513 -1.192 1.00109.77 O
ATOM 17 N3 C A 4 5.636 -27.823 -0.495 1.00107.83 N
ATOM 18 C4 C A 4 4.530 -27.318 0.045 1.00107.49 C
ATOM 19 N4 C A 4 3.495 -28.144 0.215 1.00106.92 N
ATOM 20 C5 C A 4 4.445 -25.948 0.435 1.00107.94 C
ATOM 21 C6 C A 4 5.510 -25.168 0.241 1.00108.51 C
ATOM 22 P U A 5 11.173 -26.293 2.571 1.00101.79 P
ATOM 23 OP1 U A 5 12.496 -25.941 3.135 1.00101.19 O
ATOM 24 OP2 U A 5 10.914 -27.683 2.135 1.00101.33 O
ATOM 25 O5' U A 5 10.038 -25.882 3.614 1.00100.64 O
TER
ATOM 1 O3' A B 82 -5.197 -26.399 6.995 1.00 93.95 O
ATOM 2 P G B 83 -5.750 -25.870 5.592 1.00 96.92 P
ATOM 3 OP1 G B 83 -7.085 -25.274 5.839 1.00 96.92 O
ATOM 4 OP2 G B 83 -5.600 -26.935 4.571 1.00 97.06 O
ATOM 5 O5' G B 83 -4.691 -24.727 5.236 1.00 98.77 O
ATOM 6 C5' G B 83 -4.679 -23.509 5.970 1.00 99.97 C
ATOM 7 C4' G B 83 -3.346 -22.808 5.819 1.00101.47 C
ATOM 8 O4' G B 83 -2.285 -23.727 6.171 1.00100.35 O
ATOM 9 C3' G B 83 -2.979 -22.375 4.410 1.00103.98 C
ATOM 10 O3' G B 83 -3.611 -21.158 4.069 1.00106.64 O
ATOM 11 C2' G B 83 -1.468 -22.232 4.536 1.00103.88 C
ATOM 12 O2' G B 83 -1.059 -21.083 5.253 1.00104.61 O
ATOM 13 C1' G B 83 -1.152 -23.476 5.354 1.00101.39 C
ATOM 14 N9 G B 83 -0.857 -24.651 4.533 1.00100.93 N
ATOM 15 C8 G B 83 -1.648 -25.757 4.328 1.00100.22 C
ATOM 16 N7 G B 83 -1.111 -26.649 3.542 1.00100.35 N
ATOM 17 C5 G B 83 0.118 -26.097 3.197 1.00101.08 C
ATOM 18 C6 G B 83 1.154 -26.597 2.366 1.00101.37 C
ATOM 19 O6 G B 83 1.198 -27.664 1.742 1.00101.48 O
ATOM 20 N1 G B 83 2.228 -25.718 2.284 1.00101.85 N
ATOM 21 C2 G B 83 2.305 -24.504 2.922 1.00102.38 C
ATOM 22 N2 G B 83 3.423 -23.795 2.725 1.00103.61 N
ATOM 23 N3 G B 83 1.349 -24.023 3.704 1.00102.22 N
ATOM 24 C4 G B 83 0.288 -24.868 3.799 1.00101.48 C
ATOM 25 P A B 84 -4.156 -20.966 2.579 1.00109.58 P
ATOM 26 OP1 A B 84 -4.939 -19.709 2.553 1.00111.59 O
ATOM 27 OP2 A B 84 -4.798 -22.224 2.135 1.00108.64 O
ATOM 28 O5' A B 84 -2.807 -20.794 1.738 1.00111.31 O
TER
ATOM 2 P C A 4 10.670 -28.723 -2.523 1.00111.12 P
ATOM 3 OP1 C A 4 12.129 -28.973 -2.566 1.00110.78 O
ATOM 4 OP2 C A 4 9.752 -29.848 -2.231 1.00109.50 O
ATOM 5 O5' C A 4 10.377 -27.558 -1.470 1.00109.52 O
ATOM 6 C5' C A 4 10.840 -26.236 -1.722 1.00109.92 C
ATOM 7 C4' C A 4 10.040 -25.213 -0.941 1.00109.10 C
ATOM 8 O4' C A 4 8.713 -25.085 -1.506 1.00110.27 O
ATOM 9 C3' C A 4 9.758 -25.560 0.512 1.00106.20 C
ATOM 10 O3' C A 4 10.882 -25.321 1.336 1.00104.64 O
ATOM 11 C2' C A 4 8.625 -24.591 0.805 1.00107.20 C
ATOM 12 O2' C A 4 9.065 -23.264 1.005 1.00108.50 O
ATOM 13 C1' C A 4 7.810 -24.698 -0.480 1.00109.45 C
ATOM 14 N1 C A 4 6.655 -25.663 -0.319 1.00109.00 N
ATOM 15 C2 C A 4 6.720 -27.028 -0.690 1.00108.80 C
ATOM 16 O2 C A 4 7.742 -27.513 -1.192 1.00109.77 O
ATOM 17 N3 C A 4 5.636 -27.823 -0.495 1.00107.83 N
ATOM 18 C4 C A 4 4.530 -27.318 0.045 1.00107.49 C
ATOM 19 N4 C A 4 3.495 -28.144 0.215 1.00106.92 N
ATOM 20 C5 C A 4 4.445 -25.948 0.435 1.00107.94 C
ATOM 21 C6 C A 4 5.510 -25.168 0.241 1.00108.51 C
ATOM 22 P U A 5 11.173 -26.293 2.571 1.00101.79 P
ATOM 23 OP1 U A 5 12.496 -25.941 3.135 1.00101.19 O
ATOM 24 OP2 U A 5 10.914 -27.683 2.135 1.00101.33 O
ATOM 25 O5' U A 5 10.038 -25.882 3.614 1.00100.64 O
TER
ATOM 1 O3' A B 82 -5.197 -26.399 6.995 1.00 93.95 O
ATOM 2 P G B 83 -5.750 -25.870 5.592 1.00 96.92 P
ATOM 3 OP1 G B 83 -7.085 -25.274 5.839 1.00 96.92 O
ATOM 4 OP2 G B 83 -5.600 -26.935 4.571 1.00 97.06 O
ATOM 5 O5' G B 83 -4.691 -24.727 5.236 1.00 98.77 O
ATOM 6 C5' G B 83 -4.679 -23.509 5.970 1.00 99.97 C
ATOM 7 C4' G B 83 -3.346 -22.808 5.819 1.00101.47 C
ATOM 8 O4' G B 83 -2.285 -23.727 6.171 1.00100.35 O
ATOM 9 C3' G B 83 -2.979 -22.375 4.410 1.00103.98 C
ATOM 10 O3' G B 83 -3.611 -21.158 4.069 1.00106.64 O
ATOM 11 C2' G B 83 -1.468 -22.232 4.536 1.00103.88 C
ATOM 12 O2' G B 83 -1.059 -21.083 5.253 1.00104.61 O
ATOM 13 C1' G B 83 -1.152 -23.476 5.354 1.00101.39 C
ATOM 14 N9 G B 83 -0.857 -24.651 4.533 1.00100.93 N
ATOM 15 C8 G B 83 -1.648 -25.757 4.328 1.00100.22 C
ATOM 16 N7 G B 83 -1.111 -26.649 3.542 1.00100.35 N
ATOM 17 C5 G B 83 0.118 -26.097 3.197 1.00101.08 C
ATOM 18 C6 G B 83 1.154 -26.597 2.366 1.00101.37 C
ATOM 19 O6 G B 83 1.198 -27.664 1.742 1.00101.48 O
ATOM 20 N1 G B 83 2.228 -25.718 2.284 1.00101.85 N
ATOM 21 C2 G B 83 2.305 -24.504 2.922 1.00102.38 C
ATOM 22 N2 G B 83 3.423 -23.795 2.725 1.00103.61 N
ATOM 23 N3 G B 83 1.349 -24.023 3.704 1.00102.22 N
ATOM 24 C4 G B 83 0.288 -24.868 3.799 1.00101.48 C
ATOM 25 P A B 84 -4.156 -20.966 2.579 1.00109.58 P
ATOM 26 OP1 A B 84 -4.939 -19.709 2.553 1.00111.59 O
ATOM 27 OP2 A B 84 -4.798 -22.224 2.135 1.00108.64 O
ATOM 28 O5' A B 84 -2.807 -20.794 1.738 1.00111.31 O
TER
Atoms:
C2: (6.720,-27.028,-0.690)
OP1: (12.129,-28.973,-2.566)
OP2: (9.752,-29.848,-2.231)
C4: (4.530,-27.318,0.045)
O5': (10.377,-27.558,-1.470)
C3': (9.758,-25.560,0.512)
C1': (7.810,-24.698,-0.480)
O4': (8.713,-25.085,-1.506)
C5': (10.840,-26.236,-1.722)
P: (10.670,-28.723,-2.523)
O2: (7.742,-27.513,-1.192)
C4': (10.040,-25.213,-0.941)
C2': (8.625,-24.591,0.805)
O2': (9.065,-23.264,1.005)
N1: (6.655,-25.663,-0.319)
N3: (5.636,-27.823,-0.495)
N4: (3.495,-28.144,0.215)
C6: (5.510,-25.168,0.241)
C5: (4.445,-25.948,0.435)
O3': (10.882,-25.321,1.336)
OP1: (12.129,-28.973,-2.566)
OP2: (9.752,-29.848,-2.231)
C4: (4.530,-27.318,0.045)
O5': (10.377,-27.558,-1.470)
C3': (9.758,-25.560,0.512)
C1': (7.810,-24.698,-0.480)
O4': (8.713,-25.085,-1.506)
C5': (10.840,-26.236,-1.722)
P: (10.670,-28.723,-2.523)
O2: (7.742,-27.513,-1.192)
C4': (10.040,-25.213,-0.941)
C2': (8.625,-24.591,0.805)
O2': (9.065,-23.264,1.005)
N1: (6.655,-25.663,-0.319)
N3: (5.636,-27.823,-0.495)
N4: (3.495,-28.144,0.215)
C6: (5.510,-25.168,0.241)
C5: (4.445,-25.948,0.435)
O3': (10.882,-25.321,1.336)
OP1: (-7.085,-25.274,5.839)
OP2: (-5.600,-26.935,4.571)
C3': (-2.979,-22.375,4.410)
C1': (-1.152,-23.476,5.354)
C5': (-4.679,-23.509,5.970)
O6: (1.198,-27.664,1.742)
O4': (-2.285,-23.727,6.171)
C8: (-1.648,-25.757,4.328)
C2: (2.305,-24.504,2.922)
C6: (1.154,-26.597,2.366)
C5: (0.118,-26.097,3.197)
C4: (0.288,-24.868,3.799)
P: (-5.750,-25.870,5.592)
C4': (-3.346,-22.808,5.819)
C2': (-1.468,-22.232,4.536)
O2': (-1.059,-21.083,5.253)
N1: (2.228,-25.718,2.284)
N2: (3.423,-23.795,2.725)
N3: (1.349,-24.023,3.704)
N7: (-1.111,-26.649,3.542)
N9: (-0.857,-24.651,4.533)
O5': (-4.691,-24.727,5.236)
O3': (-3.611,-21.158,4.069)
OP2: (-5.600,-26.935,4.571)
C3': (-2.979,-22.375,4.410)
C1': (-1.152,-23.476,5.354)
C5': (-4.679,-23.509,5.970)
O6: (1.198,-27.664,1.742)
O4': (-2.285,-23.727,6.171)
C8: (-1.648,-25.757,4.328)
C2: (2.305,-24.504,2.922)
C6: (1.154,-26.597,2.366)
C5: (0.118,-26.097,3.197)
C4: (0.288,-24.868,3.799)
P: (-5.750,-25.870,5.592)
C4': (-3.346,-22.808,5.819)
C2': (-1.468,-22.232,4.536)
O2': (-1.059,-21.083,5.253)
N1: (2.228,-25.718,2.284)
N2: (3.423,-23.795,2.725)
N3: (1.349,-24.023,3.704)
N7: (-1.111,-26.649,3.542)
N9: (-0.857,-24.651,4.533)
O5': (-4.691,-24.727,5.236)
O3': (-3.611,-21.158,4.069)
Image (generated by PyMOL):