Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01598:01599
Extra
PDB:
ATOM 1 O3' U A1597 107.770 183.655 84.744 1.00 49.93 O
ATOM 2 P C A1598 108.233 182.683 83.563 1.00 52.40 P
ATOM 3 OP1 C A1598 108.720 181.442 84.222 1.00 52.18 O
ATOM 4 OP2 C A1598 109.118 183.407 82.613 1.00 52.71 O
ATOM 5 O5' C A1598 106.864 182.381 82.813 1.00 52.04 O
ATOM 6 C5' C A1598 106.818 182.076 81.410 1.00 51.34 C
ATOM 7 C4' C A1598 105.491 182.518 80.856 1.00 52.92 C
ATOM 8 O4' C A1598 105.430 183.969 80.882 1.00 53.99 O
ATOM 9 C3' C A1598 105.174 182.156 79.417 1.00 53.33 C
ATOM 10 O3' C A1598 104.678 180.818 79.346 1.00 54.40 O
ATOM 11 C2' C A1598 104.102 183.191 79.073 1.00 53.51 C
ATOM 12 O2' C A1598 102.825 182.886 79.604 1.00 53.11 O
ATOM 13 C1' C A1598 104.631 184.429 79.806 1.00 52.32 C
ATOM 14 N1 C A1598 105.456 185.281 78.937 1.00 51.26 N
ATOM 15 C2 C A1598 104.824 186.263 78.164 1.00 50.97 C
ATOM 16 O2 C A1598 103.606 186.440 78.296 1.00 52.94 O
ATOM 17 N3 C A1598 105.557 186.995 77.300 1.00 49.66 N
ATOM 18 C4 C A1598 106.873 186.793 77.205 1.00 50.62 C
ATOM 19 N4 C A1598 107.553 187.516 76.315 1.00 51.82 N
ATOM 20 C5 C A1598 107.549 185.834 78.013 1.00 51.18 C
ATOM 21 C6 C A1598 106.810 185.107 78.857 1.00 51.27 C
ATOM 22 P A A1599 105.142 179.838 78.153 1.00 57.36 P
ATOM 23 OP1 A A1599 105.737 178.651 78.813 1.00 57.21 O
ATOM 24 OP2 A A1599 105.923 180.553 77.133 1.00 59.64 O
ATOM 25 O5' A A1599 103.767 179.406 77.472 1.00 58.94 O
TER
ATOM 1 O3' C B1598 104.678 180.818 79.346 1.00 54.40 O
ATOM 2 P A B1599 105.142 179.838 78.153 1.00 57.36 P
ATOM 3 OP1 A B1599 105.737 178.651 78.813 1.00 57.21 O
ATOM 4 OP2 A B1599 105.923 180.553 77.133 1.00 59.64 O
ATOM 5 O5' A B1599 103.767 179.406 77.472 1.00 58.94 O
ATOM 6 C5' A B1599 102.913 178.460 78.129 1.00 61.79 C
ATOM 7 C4' A B1599 101.623 178.253 77.368 1.00 62.70 C
ATOM 8 O4' A B1599 100.804 179.451 77.369 1.00 62.82 O
ATOM 9 C3' A B1599 101.667 177.956 75.882 1.00 61.69 C
ATOM 10 O3' A B1599 102.123 176.651 75.568 1.00 58.17 O
ATOM 11 C2' A B1599 100.184 178.075 75.551 1.00 63.68 C
ATOM 12 O2' A B1599 99.448 176.951 75.990 1.00 66.66 O
ATOM 13 C1' A B1599 99.777 179.281 76.403 1.00 63.75 C
ATOM 14 N9 A B1599 99.674 180.476 75.570 1.00 64.64 N
ATOM 15 C8 A B1599 100.487 181.576 75.506 1.00 64.86 C
ATOM 16 N7 A B1599 100.124 182.446 74.596 1.00 66.41 N
ATOM 17 C5 A B1599 98.989 181.885 74.028 1.00 67.05 C
ATOM 18 C6 A B1599 98.129 182.310 72.993 1.00 68.04 C
ATOM 19 N6 A B1599 98.276 183.454 72.321 1.00 68.53 N
ATOM 20 N1 A B1599 97.092 181.505 72.670 1.00 68.81 N
ATOM 21 C2 A B1599 96.933 180.364 73.346 1.00 67.99 C
ATOM 22 N3 A B1599 97.667 179.861 74.334 1.00 67.86 N
ATOM 23 C4 A B1599 98.693 180.679 74.629 1.00 66.66 C
ATOM 24 P A B1600 102.915 176.399 74.190 1.00 59.00 P
ATOM 25 OP1 A B1600 102.842 174.953 73.893 1.00 59.22 O
ATOM 26 OP2 A B1600 104.243 177.054 74.302 1.00 59.32 O
ATOM 27 O5' A B1600 102.062 177.161 73.080 1.00 55.24 O
TER
ATOM 2 P C A1598 108.233 182.683 83.563 1.00 52.40 P
ATOM 3 OP1 C A1598 108.720 181.442 84.222 1.00 52.18 O
ATOM 4 OP2 C A1598 109.118 183.407 82.613 1.00 52.71 O
ATOM 5 O5' C A1598 106.864 182.381 82.813 1.00 52.04 O
ATOM 6 C5' C A1598 106.818 182.076 81.410 1.00 51.34 C
ATOM 7 C4' C A1598 105.491 182.518 80.856 1.00 52.92 C
ATOM 8 O4' C A1598 105.430 183.969 80.882 1.00 53.99 O
ATOM 9 C3' C A1598 105.174 182.156 79.417 1.00 53.33 C
ATOM 10 O3' C A1598 104.678 180.818 79.346 1.00 54.40 O
ATOM 11 C2' C A1598 104.102 183.191 79.073 1.00 53.51 C
ATOM 12 O2' C A1598 102.825 182.886 79.604 1.00 53.11 O
ATOM 13 C1' C A1598 104.631 184.429 79.806 1.00 52.32 C
ATOM 14 N1 C A1598 105.456 185.281 78.937 1.00 51.26 N
ATOM 15 C2 C A1598 104.824 186.263 78.164 1.00 50.97 C
ATOM 16 O2 C A1598 103.606 186.440 78.296 1.00 52.94 O
ATOM 17 N3 C A1598 105.557 186.995 77.300 1.00 49.66 N
ATOM 18 C4 C A1598 106.873 186.793 77.205 1.00 50.62 C
ATOM 19 N4 C A1598 107.553 187.516 76.315 1.00 51.82 N
ATOM 20 C5 C A1598 107.549 185.834 78.013 1.00 51.18 C
ATOM 21 C6 C A1598 106.810 185.107 78.857 1.00 51.27 C
ATOM 22 P A A1599 105.142 179.838 78.153 1.00 57.36 P
ATOM 23 OP1 A A1599 105.737 178.651 78.813 1.00 57.21 O
ATOM 24 OP2 A A1599 105.923 180.553 77.133 1.00 59.64 O
ATOM 25 O5' A A1599 103.767 179.406 77.472 1.00 58.94 O
TER
ATOM 1 O3' C B1598 104.678 180.818 79.346 1.00 54.40 O
ATOM 2 P A B1599 105.142 179.838 78.153 1.00 57.36 P
ATOM 3 OP1 A B1599 105.737 178.651 78.813 1.00 57.21 O
ATOM 4 OP2 A B1599 105.923 180.553 77.133 1.00 59.64 O
ATOM 5 O5' A B1599 103.767 179.406 77.472 1.00 58.94 O
ATOM 6 C5' A B1599 102.913 178.460 78.129 1.00 61.79 C
ATOM 7 C4' A B1599 101.623 178.253 77.368 1.00 62.70 C
ATOM 8 O4' A B1599 100.804 179.451 77.369 1.00 62.82 O
ATOM 9 C3' A B1599 101.667 177.956 75.882 1.00 61.69 C
ATOM 10 O3' A B1599 102.123 176.651 75.568 1.00 58.17 O
ATOM 11 C2' A B1599 100.184 178.075 75.551 1.00 63.68 C
ATOM 12 O2' A B1599 99.448 176.951 75.990 1.00 66.66 O
ATOM 13 C1' A B1599 99.777 179.281 76.403 1.00 63.75 C
ATOM 14 N9 A B1599 99.674 180.476 75.570 1.00 64.64 N
ATOM 15 C8 A B1599 100.487 181.576 75.506 1.00 64.86 C
ATOM 16 N7 A B1599 100.124 182.446 74.596 1.00 66.41 N
ATOM 17 C5 A B1599 98.989 181.885 74.028 1.00 67.05 C
ATOM 18 C6 A B1599 98.129 182.310 72.993 1.00 68.04 C
ATOM 19 N6 A B1599 98.276 183.454 72.321 1.00 68.53 N
ATOM 20 N1 A B1599 97.092 181.505 72.670 1.00 68.81 N
ATOM 21 C2 A B1599 96.933 180.364 73.346 1.00 67.99 C
ATOM 22 N3 A B1599 97.667 179.861 74.334 1.00 67.86 N
ATOM 23 C4 A B1599 98.693 180.679 74.629 1.00 66.66 C
ATOM 24 P A B1600 102.915 176.399 74.190 1.00 59.00 P
ATOM 25 OP1 A B1600 102.842 174.953 73.893 1.00 59.22 O
ATOM 26 OP2 A B1600 104.243 177.054 74.302 1.00 59.32 O
ATOM 27 O5' A B1600 102.062 177.161 73.080 1.00 55.24 O
TER
Atoms:
C2: (104.824,186.263,78.164)
OP1: (108.720,181.442,84.222)
OP2: (109.118,183.407,82.613)
C4: (106.873,186.793,77.205)
O5': (106.864,182.381,82.813)
C3': (105.174,182.156,79.417)
C1': (104.631,184.429,79.806)
O4': (105.430,183.969,80.882)
C5': (106.818,182.076,81.410)
P: (108.233,182.683,83.563)
O2: (103.606,186.440,78.296)
C4': (105.491,182.518,80.856)
C2': (104.102,183.191,79.073)
O2': (102.825,182.886,79.604)
N1: (105.456,185.281,78.937)
N3: (105.557,186.995,77.300)
N4: (107.553,187.516,76.315)
C6: (106.810,185.107,78.857)
C5: (107.549,185.834,78.013)
O3': (104.678,180.818,79.346)
OP1: (108.720,181.442,84.222)
OP2: (109.118,183.407,82.613)
C4: (106.873,186.793,77.205)
O5': (106.864,182.381,82.813)
C3': (105.174,182.156,79.417)
C1': (104.631,184.429,79.806)
O4': (105.430,183.969,80.882)
C5': (106.818,182.076,81.410)
P: (108.233,182.683,83.563)
O2: (103.606,186.440,78.296)
C4': (105.491,182.518,80.856)
C2': (104.102,183.191,79.073)
O2': (102.825,182.886,79.604)
N1: (105.456,185.281,78.937)
N3: (105.557,186.995,77.300)
N4: (107.553,187.516,76.315)
C6: (106.810,185.107,78.857)
C5: (107.549,185.834,78.013)
O3': (104.678,180.818,79.346)
OP1: (105.737,178.651,78.813)
OP2: (105.923,180.553,77.133)
C3': (101.667,177.956,75.882)
C1': (99.777,179.281,76.403)
C5': (102.913,178.460,78.129)
O4': (100.804,179.451,77.369)
C8: (100.487,181.576,75.506)
O2': (99.448,176.951,75.990)
C6: (98.129,182.310,72.993)
C5: (98.989,181.885,74.028)
C4: (98.693,180.679,74.629)
P: (105.142,179.838,78.153)
C4': (101.623,178.253,77.368)
C2': (100.184,178.075,75.551)
C2: (96.933,180.364,73.346)
N1: (97.092,181.505,72.670)
N3: (97.667,179.861,74.334)
N6: (98.276,183.454,72.321)
N7: (100.124,182.446,74.596)
N9: (99.674,180.476,75.570)
O5': (103.767,179.406,77.472)
O3': (102.123,176.651,75.568)
OP2: (105.923,180.553,77.133)
C3': (101.667,177.956,75.882)
C1': (99.777,179.281,76.403)
C5': (102.913,178.460,78.129)
O4': (100.804,179.451,77.369)
C8: (100.487,181.576,75.506)
O2': (99.448,176.951,75.990)
C6: (98.129,182.310,72.993)
C5: (98.989,181.885,74.028)
C4: (98.693,180.679,74.629)
P: (105.142,179.838,78.153)
C4': (101.623,178.253,77.368)
C2': (100.184,178.075,75.551)
C2: (96.933,180.364,73.346)
N1: (97.092,181.505,72.670)
N3: (97.667,179.861,74.334)
N6: (98.276,183.454,72.321)
N7: (100.124,182.446,74.596)
N9: (99.674,180.476,75.570)
O5': (103.767,179.406,77.472)
O3': (102.123,176.651,75.568)
Image (generated by PyMOL):