Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01598:01599
Extra
PDB:
ATOM 1 O3' U A1597 107.898 183.902 85.024 1.00 60.82 O
ATOM 2 P C A1598 108.451 182.955 83.858 1.00 62.42 P
ATOM 3 OP1 C A1598 109.059 181.776 84.528 1.00 61.94 O
ATOM 4 OP2 C A1598 109.250 183.741 82.875 1.00 61.79 O
ATOM 5 O5' C A1598 107.121 182.499 83.123 1.00 63.56 O
ATOM 6 C5' C A1598 107.089 182.248 81.713 1.00 64.78 C
ATOM 7 C4' C A1598 105.745 182.650 81.178 1.00 66.60 C
ATOM 8 O4' C A1598 105.642 184.094 81.219 1.00 68.07 O
ATOM 9 C3' C A1598 105.438 182.296 79.737 1.00 67.12 C
ATOM 10 O3' C A1598 104.988 180.947 79.654 1.00 67.26 O
ATOM 11 C2' C A1598 104.339 183.300 79.405 1.00 67.82 C
ATOM 12 O2' C A1598 103.082 182.954 79.960 1.00 68.97 O
ATOM 13 C1' C A1598 104.850 184.545 80.134 1.00 67.73 C
ATOM 14 N1 C A1598 105.686 185.400 79.281 1.00 67.17 N
ATOM 15 C2 C A1598 105.085 186.443 78.573 1.00 69.13 C
ATOM 16 O2 C A1598 103.873 186.654 78.724 1.00 71.85 O
ATOM 17 N3 C A1598 105.838 187.199 77.747 1.00 69.16 N
ATOM 18 C4 C A1598 107.143 186.953 77.628 1.00 70.03 C
ATOM 19 N4 C A1598 107.850 187.710 76.789 1.00 72.01 N
ATOM 20 C5 C A1598 107.785 185.916 78.360 1.00 69.70 C
ATOM 21 C6 C A1598 107.026 185.172 79.166 1.00 68.16 C
ATOM 22 P A A1599 105.413 180.031 78.407 1.00 67.82 P
ATOM 23 OP1 A A1599 106.058 178.823 78.973 1.00 67.19 O
ATOM 24 OP2 A A1599 106.151 180.846 77.434 1.00 69.91 O
ATOM 25 O5' A A1599 104.016 179.619 77.755 1.00 68.41 O
TER
ATOM 1 O3' C B1598 104.988 180.947 79.654 1.00 67.26 O
ATOM 2 P A B1599 105.413 180.031 78.407 1.00 67.82 P
ATOM 3 OP1 A B1599 106.058 178.823 78.973 1.00 67.19 O
ATOM 4 OP2 A B1599 106.151 180.846 77.434 1.00 69.91 O
ATOM 5 O5' A B1599 104.016 179.619 77.755 1.00 68.41 O
ATOM 6 C5' A B1599 103.141 178.724 78.457 1.00 69.44 C
ATOM 7 C4' A B1599 101.845 178.503 77.707 1.00 70.09 C
ATOM 8 O4' A B1599 101.022 179.697 77.694 1.00 70.44 O
ATOM 9 C3' A B1599 101.865 178.169 76.226 1.00 70.08 C
ATOM 10 O3' A B1599 102.326 176.859 75.923 1.00 68.02 O
ATOM 11 C2' A B1599 100.375 178.268 75.929 1.00 71.09 C
ATOM 12 O2' A B1599 99.660 177.163 76.444 1.00 73.07 O
ATOM 13 C1' A B1599 99.988 179.510 76.738 1.00 70.70 C
ATOM 14 N9 A B1599 99.909 180.673 75.855 1.00 71.44 N
ATOM 15 C8 A B1599 100.690 181.797 75.808 1.00 71.93 C
ATOM 16 N7 A B1599 100.372 182.617 74.835 1.00 73.08 N
ATOM 17 C5 A B1599 99.300 181.995 74.208 1.00 73.84 C
ATOM 18 C6 A B1599 98.509 182.345 73.091 1.00 74.38 C
ATOM 19 N6 A B1599 98.674 183.461 72.377 1.00 76.09 N
ATOM 20 N1 A B1599 97.527 181.496 72.728 1.00 73.80 N
ATOM 21 C2 A B1599 97.350 180.384 73.440 1.00 73.36 C
ATOM 22 N3 A B1599 98.019 179.947 74.500 1.00 73.80 N
ATOM 23 C4 A B1599 98.995 180.807 74.836 1.00 73.08 C
ATOM 24 P A B1600 103.178 176.609 74.581 1.00 66.40 P
ATOM 25 OP1 A B1600 103.158 175.153 74.318 1.00 66.74 O
ATOM 26 OP2 A B1600 104.478 177.302 74.725 1.00 66.62 O
ATOM 27 O5' A B1600 102.338 177.325 73.435 1.00 64.94 O
TER
ATOM 2 P C A1598 108.451 182.955 83.858 1.00 62.42 P
ATOM 3 OP1 C A1598 109.059 181.776 84.528 1.00 61.94 O
ATOM 4 OP2 C A1598 109.250 183.741 82.875 1.00 61.79 O
ATOM 5 O5' C A1598 107.121 182.499 83.123 1.00 63.56 O
ATOM 6 C5' C A1598 107.089 182.248 81.713 1.00 64.78 C
ATOM 7 C4' C A1598 105.745 182.650 81.178 1.00 66.60 C
ATOM 8 O4' C A1598 105.642 184.094 81.219 1.00 68.07 O
ATOM 9 C3' C A1598 105.438 182.296 79.737 1.00 67.12 C
ATOM 10 O3' C A1598 104.988 180.947 79.654 1.00 67.26 O
ATOM 11 C2' C A1598 104.339 183.300 79.405 1.00 67.82 C
ATOM 12 O2' C A1598 103.082 182.954 79.960 1.00 68.97 O
ATOM 13 C1' C A1598 104.850 184.545 80.134 1.00 67.73 C
ATOM 14 N1 C A1598 105.686 185.400 79.281 1.00 67.17 N
ATOM 15 C2 C A1598 105.085 186.443 78.573 1.00 69.13 C
ATOM 16 O2 C A1598 103.873 186.654 78.724 1.00 71.85 O
ATOM 17 N3 C A1598 105.838 187.199 77.747 1.00 69.16 N
ATOM 18 C4 C A1598 107.143 186.953 77.628 1.00 70.03 C
ATOM 19 N4 C A1598 107.850 187.710 76.789 1.00 72.01 N
ATOM 20 C5 C A1598 107.785 185.916 78.360 1.00 69.70 C
ATOM 21 C6 C A1598 107.026 185.172 79.166 1.00 68.16 C
ATOM 22 P A A1599 105.413 180.031 78.407 1.00 67.82 P
ATOM 23 OP1 A A1599 106.058 178.823 78.973 1.00 67.19 O
ATOM 24 OP2 A A1599 106.151 180.846 77.434 1.00 69.91 O
ATOM 25 O5' A A1599 104.016 179.619 77.755 1.00 68.41 O
TER
ATOM 1 O3' C B1598 104.988 180.947 79.654 1.00 67.26 O
ATOM 2 P A B1599 105.413 180.031 78.407 1.00 67.82 P
ATOM 3 OP1 A B1599 106.058 178.823 78.973 1.00 67.19 O
ATOM 4 OP2 A B1599 106.151 180.846 77.434 1.00 69.91 O
ATOM 5 O5' A B1599 104.016 179.619 77.755 1.00 68.41 O
ATOM 6 C5' A B1599 103.141 178.724 78.457 1.00 69.44 C
ATOM 7 C4' A B1599 101.845 178.503 77.707 1.00 70.09 C
ATOM 8 O4' A B1599 101.022 179.697 77.694 1.00 70.44 O
ATOM 9 C3' A B1599 101.865 178.169 76.226 1.00 70.08 C
ATOM 10 O3' A B1599 102.326 176.859 75.923 1.00 68.02 O
ATOM 11 C2' A B1599 100.375 178.268 75.929 1.00 71.09 C
ATOM 12 O2' A B1599 99.660 177.163 76.444 1.00 73.07 O
ATOM 13 C1' A B1599 99.988 179.510 76.738 1.00 70.70 C
ATOM 14 N9 A B1599 99.909 180.673 75.855 1.00 71.44 N
ATOM 15 C8 A B1599 100.690 181.797 75.808 1.00 71.93 C
ATOM 16 N7 A B1599 100.372 182.617 74.835 1.00 73.08 N
ATOM 17 C5 A B1599 99.300 181.995 74.208 1.00 73.84 C
ATOM 18 C6 A B1599 98.509 182.345 73.091 1.00 74.38 C
ATOM 19 N6 A B1599 98.674 183.461 72.377 1.00 76.09 N
ATOM 20 N1 A B1599 97.527 181.496 72.728 1.00 73.80 N
ATOM 21 C2 A B1599 97.350 180.384 73.440 1.00 73.36 C
ATOM 22 N3 A B1599 98.019 179.947 74.500 1.00 73.80 N
ATOM 23 C4 A B1599 98.995 180.807 74.836 1.00 73.08 C
ATOM 24 P A B1600 103.178 176.609 74.581 1.00 66.40 P
ATOM 25 OP1 A B1600 103.158 175.153 74.318 1.00 66.74 O
ATOM 26 OP2 A B1600 104.478 177.302 74.725 1.00 66.62 O
ATOM 27 O5' A B1600 102.338 177.325 73.435 1.00 64.94 O
TER
Atoms:
C2: (105.085,186.443,78.573)
OP1: (109.059,181.776,84.528)
OP2: (109.250,183.741,82.875)
C4: (107.143,186.953,77.628)
O5': (107.121,182.499,83.123)
C3': (105.438,182.296,79.737)
C1': (104.850,184.545,80.134)
O4': (105.642,184.094,81.219)
C5': (107.089,182.248,81.713)
P: (108.451,182.955,83.858)
O2: (103.873,186.654,78.724)
C4': (105.745,182.650,81.178)
C2': (104.339,183.300,79.405)
O2': (103.082,182.954,79.960)
N1: (105.686,185.400,79.281)
N3: (105.838,187.199,77.747)
N4: (107.850,187.710,76.789)
C6: (107.026,185.172,79.166)
C5: (107.785,185.916,78.360)
O3': (104.988,180.947,79.654)
OP1: (109.059,181.776,84.528)
OP2: (109.250,183.741,82.875)
C4: (107.143,186.953,77.628)
O5': (107.121,182.499,83.123)
C3': (105.438,182.296,79.737)
C1': (104.850,184.545,80.134)
O4': (105.642,184.094,81.219)
C5': (107.089,182.248,81.713)
P: (108.451,182.955,83.858)
O2: (103.873,186.654,78.724)
C4': (105.745,182.650,81.178)
C2': (104.339,183.300,79.405)
O2': (103.082,182.954,79.960)
N1: (105.686,185.400,79.281)
N3: (105.838,187.199,77.747)
N4: (107.850,187.710,76.789)
C6: (107.026,185.172,79.166)
C5: (107.785,185.916,78.360)
O3': (104.988,180.947,79.654)
OP1: (106.058,178.823,78.973)
OP2: (106.151,180.846,77.434)
C3': (101.865,178.169,76.226)
C1': (99.988,179.510,76.738)
C5': (103.141,178.724,78.457)
O4': (101.022,179.697,77.694)
C8: (100.690,181.797,75.808)
O2': (99.660,177.163,76.444)
C6: (98.509,182.345,73.091)
C5: (99.300,181.995,74.208)
C4: (98.995,180.807,74.836)
P: (105.413,180.031,78.407)
C4': (101.845,178.503,77.707)
C2': (100.375,178.268,75.929)
C2: (97.350,180.384,73.440)
N1: (97.527,181.496,72.728)
N3: (98.019,179.947,74.500)
N6: (98.674,183.461,72.377)
N7: (100.372,182.617,74.835)
N9: (99.909,180.673,75.855)
O5': (104.016,179.619,77.755)
O3': (102.326,176.859,75.923)
OP2: (106.151,180.846,77.434)
C3': (101.865,178.169,76.226)
C1': (99.988,179.510,76.738)
C5': (103.141,178.724,78.457)
O4': (101.022,179.697,77.694)
C8: (100.690,181.797,75.808)
O2': (99.660,177.163,76.444)
C6: (98.509,182.345,73.091)
C5: (99.300,181.995,74.208)
C4: (98.995,180.807,74.836)
P: (105.413,180.031,78.407)
C4': (101.845,178.503,77.707)
C2': (100.375,178.268,75.929)
C2: (97.350,180.384,73.440)
N1: (97.527,181.496,72.728)
N3: (98.019,179.947,74.500)
N6: (98.674,183.461,72.377)
N7: (100.372,182.617,74.835)
N9: (99.909,180.673,75.855)
O5': (104.016,179.619,77.755)
O3': (102.326,176.859,75.923)
Image (generated by PyMOL):