Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1067:A1061
Extra
PDB:
ATOM 1 O3' A A1066 11.454 104.422 121.079 1.00 44.13 O
ATOM 2 P G A1067 10.921 105.211 122.364 1.00 45.66 P
ATOM 3 OP1 G A1067 9.843 104.337 122.876 1.00 46.19 O
ATOM 4 OP2 G A1067 10.627 106.624 122.034 1.00 44.34 O
ATOM 5 O5' G A1067 12.140 105.172 123.383 1.00 45.10 O
ATOM 6 C5' G A1067 12.707 103.927 123.777 1.00 44.70 C
ATOM 7 C4' G A1067 12.662 103.779 125.276 1.00 43.87 C
ATOM 8 O4' G A1067 13.135 102.453 125.620 1.00 42.81 O
ATOM 9 C3' G A1067 13.543 104.744 126.055 1.00 44.12 C
ATOM 10 O3' G A1067 13.071 104.795 127.393 1.00 46.99 O
ATOM 11 C2' G A1067 14.837 103.958 126.134 1.00 43.54 C
ATOM 12 O2' G A1067 15.669 104.353 127.196 1.00 45.41 O
ATOM 13 C1' G A1067 14.288 102.563 126.408 1.00 42.62 C
ATOM 14 N9 G A1067 15.168 101.463 126.062 1.00 42.59 N
ATOM 15 C8 G A1067 16.506 101.539 125.794 1.00 43.50 C
ATOM 16 N7 G A1067 17.040 100.384 125.514 1.00 44.59 N
ATOM 17 C5 G A1067 15.982 99.490 125.591 1.00 44.68 C
ATOM 18 C6 G A1067 15.943 98.086 125.381 1.00 45.66 C
ATOM 19 O6 G A1067 16.866 97.323 125.050 1.00 46.91 O
ATOM 20 N1 G A1067 14.666 97.577 125.594 1.00 43.92 N
ATOM 21 C2 G A1067 13.573 98.311 125.960 1.00 42.98 C
ATOM 22 N2 G A1067 12.435 97.620 126.138 1.00 44.74 N
ATOM 23 N3 G A1067 13.590 99.615 126.143 1.00 42.64 N
ATOM 24 C4 G A1067 14.820 100.138 125.943 1.00 43.62 C
ATOM 25 P U A1068 11.909 105.816 127.825 1.00 49.26 P
ATOM 26 OP1 U A1068 10.708 105.009 128.138 1.00 46.77 O
ATOM 27 OP2 U A1068 11.801 106.975 126.898 1.00 48.32 O
ATOM 28 O5' U A1068 12.452 106.355 129.213 1.00 49.74 O
TER
ATOM 1 O3' U B1060 18.726 105.399 124.197 1.00 42.75 O
ATOM 2 P C B1061 19.101 105.175 125.722 1.00 42.61 P
ATOM 3 OP1 C B1061 20.502 104.705 125.743 1.00 43.07 O
ATOM 4 OP2 C B1061 18.038 104.317 126.289 1.00 42.90 O
ATOM 5 O5' C B1061 19.027 106.642 126.328 1.00 39.61 O
ATOM 6 C5' C B1061 17.857 107.092 127.031 1.00 40.84 C
ATOM 7 C4' C B1061 18.006 108.542 127.380 1.00 41.06 C
ATOM 8 O4' C B1061 19.127 108.700 128.283 1.00 42.38 O
ATOM 9 C3' C B1061 18.349 109.437 126.204 1.00 42.15 C
ATOM 10 O3' C B1061 17.175 109.824 125.500 1.00 42.44 O
ATOM 11 C2' C B1061 19.018 110.614 126.893 1.00 42.61 C
ATOM 12 O2' C B1061 18.062 111.450 127.512 1.00 43.29 O
ATOM 13 C1' C B1061 19.818 109.901 127.985 1.00 42.20 C
ATOM 14 N1 C B1061 21.208 109.555 127.614 1.00 40.50 N
ATOM 15 C2 C B1061 22.169 110.561 127.577 1.00 40.54 C
ATOM 16 O2 C B1061 21.824 111.728 127.815 1.00 41.36 O
ATOM 17 N3 C B1061 23.454 110.237 127.280 1.00 39.95 N
ATOM 18 C4 C B1061 23.783 108.969 127.023 1.00 39.57 C
ATOM 19 N4 C B1061 25.056 108.696 126.752 1.00 38.98 N
ATOM 20 C5 C B1061 22.821 107.931 127.035 1.00 39.60 C
ATOM 21 C6 C B1061 21.557 108.264 127.326 1.00 39.33 C
ATOM 22 P C B1062 17.285 110.328 123.985 1.00 44.14 P
ATOM 23 OP1 C B1062 15.904 110.548 123.506 1.00 44.89 O
ATOM 24 OP2 C B1062 18.158 109.381 123.260 1.00 45.77 O
ATOM 25 O5' C B1062 18.037 111.728 124.107 1.00 40.43 O
TER
ATOM 2 P G A1067 10.921 105.211 122.364 1.00 45.66 P
ATOM 3 OP1 G A1067 9.843 104.337 122.876 1.00 46.19 O
ATOM 4 OP2 G A1067 10.627 106.624 122.034 1.00 44.34 O
ATOM 5 O5' G A1067 12.140 105.172 123.383 1.00 45.10 O
ATOM 6 C5' G A1067 12.707 103.927 123.777 1.00 44.70 C
ATOM 7 C4' G A1067 12.662 103.779 125.276 1.00 43.87 C
ATOM 8 O4' G A1067 13.135 102.453 125.620 1.00 42.81 O
ATOM 9 C3' G A1067 13.543 104.744 126.055 1.00 44.12 C
ATOM 10 O3' G A1067 13.071 104.795 127.393 1.00 46.99 O
ATOM 11 C2' G A1067 14.837 103.958 126.134 1.00 43.54 C
ATOM 12 O2' G A1067 15.669 104.353 127.196 1.00 45.41 O
ATOM 13 C1' G A1067 14.288 102.563 126.408 1.00 42.62 C
ATOM 14 N9 G A1067 15.168 101.463 126.062 1.00 42.59 N
ATOM 15 C8 G A1067 16.506 101.539 125.794 1.00 43.50 C
ATOM 16 N7 G A1067 17.040 100.384 125.514 1.00 44.59 N
ATOM 17 C5 G A1067 15.982 99.490 125.591 1.00 44.68 C
ATOM 18 C6 G A1067 15.943 98.086 125.381 1.00 45.66 C
ATOM 19 O6 G A1067 16.866 97.323 125.050 1.00 46.91 O
ATOM 20 N1 G A1067 14.666 97.577 125.594 1.00 43.92 N
ATOM 21 C2 G A1067 13.573 98.311 125.960 1.00 42.98 C
ATOM 22 N2 G A1067 12.435 97.620 126.138 1.00 44.74 N
ATOM 23 N3 G A1067 13.590 99.615 126.143 1.00 42.64 N
ATOM 24 C4 G A1067 14.820 100.138 125.943 1.00 43.62 C
ATOM 25 P U A1068 11.909 105.816 127.825 1.00 49.26 P
ATOM 26 OP1 U A1068 10.708 105.009 128.138 1.00 46.77 O
ATOM 27 OP2 U A1068 11.801 106.975 126.898 1.00 48.32 O
ATOM 28 O5' U A1068 12.452 106.355 129.213 1.00 49.74 O
TER
ATOM 1 O3' U B1060 18.726 105.399 124.197 1.00 42.75 O
ATOM 2 P C B1061 19.101 105.175 125.722 1.00 42.61 P
ATOM 3 OP1 C B1061 20.502 104.705 125.743 1.00 43.07 O
ATOM 4 OP2 C B1061 18.038 104.317 126.289 1.00 42.90 O
ATOM 5 O5' C B1061 19.027 106.642 126.328 1.00 39.61 O
ATOM 6 C5' C B1061 17.857 107.092 127.031 1.00 40.84 C
ATOM 7 C4' C B1061 18.006 108.542 127.380 1.00 41.06 C
ATOM 8 O4' C B1061 19.127 108.700 128.283 1.00 42.38 O
ATOM 9 C3' C B1061 18.349 109.437 126.204 1.00 42.15 C
ATOM 10 O3' C B1061 17.175 109.824 125.500 1.00 42.44 O
ATOM 11 C2' C B1061 19.018 110.614 126.893 1.00 42.61 C
ATOM 12 O2' C B1061 18.062 111.450 127.512 1.00 43.29 O
ATOM 13 C1' C B1061 19.818 109.901 127.985 1.00 42.20 C
ATOM 14 N1 C B1061 21.208 109.555 127.614 1.00 40.50 N
ATOM 15 C2 C B1061 22.169 110.561 127.577 1.00 40.54 C
ATOM 16 O2 C B1061 21.824 111.728 127.815 1.00 41.36 O
ATOM 17 N3 C B1061 23.454 110.237 127.280 1.00 39.95 N
ATOM 18 C4 C B1061 23.783 108.969 127.023 1.00 39.57 C
ATOM 19 N4 C B1061 25.056 108.696 126.752 1.00 38.98 N
ATOM 20 C5 C B1061 22.821 107.931 127.035 1.00 39.60 C
ATOM 21 C6 C B1061 21.557 108.264 127.326 1.00 39.33 C
ATOM 22 P C B1062 17.285 110.328 123.985 1.00 44.14 P
ATOM 23 OP1 C B1062 15.904 110.548 123.506 1.00 44.89 O
ATOM 24 OP2 C B1062 18.158 109.381 123.260 1.00 45.77 O
ATOM 25 O5' C B1062 18.037 111.728 124.107 1.00 40.43 O
TER
Atoms:
OP1: (9.843,104.337,122.876)
OP2: (10.627,106.624,122.034)
C3': (13.543,104.744,126.055)
C1': (14.288,102.563,126.408)
C5': (12.707,103.927,123.777)
O6: (16.866,97.323,125.050)
O4': (13.135,102.453,125.620)
C8: (16.506,101.539,125.794)
C2: (13.573,98.311,125.960)
C6: (15.943,98.086,125.381)
C5: (15.982,99.490,125.591)
C4: (14.820,100.138,125.943)
P: (10.921,105.211,122.364)
C4': (12.662,103.779,125.276)
C2': (14.837,103.958,126.134)
O2': (15.669,104.353,127.196)
N1: (14.666,97.577,125.594)
N2: (12.435,97.620,126.138)
N3: (13.590,99.615,126.143)
N7: (17.040,100.384,125.514)
N9: (15.168,101.463,126.062)
O5': (12.140,105.172,123.383)
O3': (13.071,104.795,127.393)
OP2: (10.627,106.624,122.034)
C3': (13.543,104.744,126.055)
C1': (14.288,102.563,126.408)
C5': (12.707,103.927,123.777)
O6: (16.866,97.323,125.050)
O4': (13.135,102.453,125.620)
C8: (16.506,101.539,125.794)
C2: (13.573,98.311,125.960)
C6: (15.943,98.086,125.381)
C5: (15.982,99.490,125.591)
C4: (14.820,100.138,125.943)
P: (10.921,105.211,122.364)
C4': (12.662,103.779,125.276)
C2': (14.837,103.958,126.134)
O2': (15.669,104.353,127.196)
N1: (14.666,97.577,125.594)
N2: (12.435,97.620,126.138)
N3: (13.590,99.615,126.143)
N7: (17.040,100.384,125.514)
N9: (15.168,101.463,126.062)
O5': (12.140,105.172,123.383)
O3': (13.071,104.795,127.393)
C2: (22.169,110.561,127.577)
OP1: (20.502,104.705,125.743)
OP2: (18.038,104.317,126.289)
C4: (23.783,108.969,127.023)
O5': (19.027,106.642,126.328)
C3': (18.349,109.437,126.204)
C1': (19.818,109.901,127.985)
O4': (19.127,108.700,128.283)
C5': (17.857,107.092,127.031)
P: (19.101,105.175,125.722)
O2: (21.824,111.728,127.815)
C4': (18.006,108.542,127.380)
C2': (19.018,110.614,126.893)
O2': (18.062,111.450,127.512)
N1: (21.208,109.555,127.614)
N3: (23.454,110.237,127.280)
N4: (25.056,108.696,126.752)
C6: (21.557,108.264,127.326)
C5: (22.821,107.931,127.035)
O3': (17.175,109.824,125.500)
OP1: (20.502,104.705,125.743)
OP2: (18.038,104.317,126.289)
C4: (23.783,108.969,127.023)
O5': (19.027,106.642,126.328)
C3': (18.349,109.437,126.204)
C1': (19.818,109.901,127.985)
O4': (19.127,108.700,128.283)
C5': (17.857,107.092,127.031)
P: (19.101,105.175,125.722)
O2: (21.824,111.728,127.815)
C4': (18.006,108.542,127.380)
C2': (19.018,110.614,126.893)
O2': (18.062,111.450,127.512)
N1: (21.208,109.555,127.614)
N3: (23.454,110.237,127.280)
N4: (25.056,108.696,126.752)
C6: (21.557,108.264,127.326)
C5: (22.821,107.931,127.035)
O3': (17.175,109.824,125.500)
Image (generated by PyMOL):