ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQP:02239:02231

Extra

PDB:
ATOM 1 O3' G A2238 64.766 73.514 68.016 1.00 45.19 O
ATOM 2 P A A2239 65.259 72.021 68.338 1.00 45.37 P
ATOM 3 OP1 A A2239 65.456 71.360 67.023 1.00 47.67 O
ATOM 4 OP2 A A2239 64.340 71.418 69.334 1.00 46.01 O
ATOM 5 O5' A A2239 66.680 72.217 69.035 1.00 46.02 O
ATOM 6 C5' A A2239 67.790 72.799 68.310 1.00 45.00 C
ATOM 7 C4' A A2239 68.959 73.036 69.236 1.00 43.43 C
ATOM 8 O4' A A2239 68.577 74.000 70.251 1.00 43.57 O
ATOM 9 C3' A A2239 69.405 71.829 70.044 1.00 44.25 C
ATOM 10 O3' A A2239 70.253 70.956 69.319 1.00 45.16 O
ATOM 11 C2' A A2239 70.119 72.474 71.218 1.00 43.45 C
ATOM 12 O2' A A2239 71.421 72.915 70.902 1.00 44.83 O
ATOM 13 C1' A A2239 69.214 73.676 71.480 1.00 42.74 C
ATOM 14 N9 A A2239 68.183 73.358 72.468 1.00 42.76 N
ATOM 15 C8 A A2239 66.882 72.986 72.243 1.00 42.40 C
ATOM 16 N7 A A2239 66.200 72.769 73.337 1.00 43.63 N
ATOM 17 C5 A A2239 67.115 73.008 74.352 1.00 42.08 C
ATOM 18 C6 A A2239 67.009 72.950 75.749 1.00 42.33 C
ATOM 19 N6 A A2239 65.894 72.598 76.394 1.00 41.03 N
ATOM 20 N1 A A2239 68.103 73.267 76.473 1.00 42.85 N
ATOM 21 C2 A A2239 69.221 73.600 75.826 1.00 40.73 C
ATOM 22 N3 A A2239 69.445 73.679 74.523 1.00 41.16 N
ATOM 23 C4 A A2239 68.337 73.372 73.832 1.00 40.71 C
ATOM 24 P G A2240 70.169 69.375 69.583 1.00 44.94 P
ATOM 25 OP1 G A2240 71.283 68.738 68.834 1.00 46.05 O
ATOM 26 OP2 G A2240 68.769 68.956 69.319 1.00 45.24 O
ATOM 27 O5' G A2240 70.430 69.221 71.151 1.00 44.60 O
TER

ATOM 1 O3' U B2230 59.812 68.980 81.972 1.00 42.27 O
ATOM 2 P U B2231 59.424 70.537 82.029 1.00 40.89 P
ATOM 3 OP1 U B2231 59.405 70.943 83.451 1.00 40.48 O
ATOM 4 OP2 U B2231 58.217 70.721 81.206 1.00 40.81 O
ATOM 5 O5' U B2231 60.650 71.256 81.303 1.00 42.40 O
ATOM 6 C5' U B2231 61.990 71.174 81.842 1.00 38.66 C
ATOM 7 C4' U B2231 62.998 71.631 80.810 1.00 39.69 C
ATOM 8 O4' U B2231 62.934 70.756 79.658 1.00 41.47 O
ATOM 9 C3' U B2231 62.774 73.019 80.227 1.00 40.09 C
ATOM 10 O3' U B2231 63.331 74.025 81.055 1.00 38.54 O
ATOM 11 C2' U B2231 63.493 72.937 78.889 1.00 39.04 C
ATOM 12 O2' U B2231 64.886 73.092 79.020 1.00 42.19 O
ATOM 13 C1' U B2231 63.186 71.499 78.475 1.00 40.31 C
ATOM 14 N1 U B2231 62.016 71.379 77.593 1.00 42.32 N
ATOM 15 C2 U B2231 62.243 71.359 76.225 1.00 43.04 C
ATOM 16 O2 U B2231 63.354 71.449 75.736 1.00 44.60 O
ATOM 17 N3 U B2231 61.117 71.229 75.453 1.00 42.41 N
ATOM 18 C4 U B2231 59.814 71.130 75.895 1.00 43.94 C
ATOM 19 O4 U B2231 58.905 71.019 75.073 1.00 46.07 O
ATOM 20 C5 U B2231 59.659 71.169 77.319 1.00 42.54 C
ATOM 21 C6 U B2231 60.737 71.286 78.099 1.00 41.78 C
ATOM 22 P C B2232 62.727 75.509 81.017 1.00 39.44 P
ATOM 23 OP1 C B2232 62.812 76.043 79.637 1.00 40.24 O
ATOM 24 OP2 C B2232 63.367 76.251 82.126 1.00 41.44 O
ATOM 25 O5' C B2232 61.186 75.308 81.364 1.00 41.18 O
TER

Atoms:
OP1: (65.456,71.360,67.023)
OP2: (64.340,71.418,69.334)
C3': (69.405,71.829,70.044)
C1': (69.214,73.676,71.480)
C5': (67.790,72.799,68.310)
O4': (68.577,74.000,70.251)
C8: (66.882,72.986,72.243)
O2': (71.421,72.915,70.902)
C6: (67.009,72.950,75.749)
C5: (67.115,73.008,74.352)
C4: (68.337,73.372,73.832)
P: (65.259,72.021,68.338)
C4': (68.959,73.036,69.236)
C2': (70.119,72.474,71.218)
C2: (69.221,73.600,75.826)
N1: (68.103,73.267,76.473)
N3: (69.445,73.679,74.523)
N6: (65.894,72.598,76.394)
N7: (66.200,72.769,73.337)
N9: (68.183,73.358,72.468)
O5': (66.680,72.217,69.035)
O3': (70.253,70.956,69.319)
C4: (59.814,71.130,75.895)
N3: (61.117,71.229,75.453)
OP1: (59.405,70.943,83.451)
OP2: (58.217,70.721,81.206)
C2: (62.243,71.359,76.225)
C1': (63.186,71.499,78.475)
C3': (62.774,73.019,80.227)
O5': (60.650,71.256,81.303)
O4': (62.934,70.756,79.658)
C5': (61.990,71.174,81.842)
P: (59.424,70.537,82.029)
C4': (62.998,71.631,80.810)
C2': (63.493,72.937,78.889)
O2': (64.886,73.092,79.020)
N1: (62.016,71.379,77.593)
O4: (58.905,71.019,75.073)
O2: (63.354,71.449,75.736)
C6: (60.737,71.286,78.099)
C5: (59.659,71.169,77.319)
O3': (63.331,74.025,81.055)
Image (generated by PyMOL):
PyMOL image
show in jmol