Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0422:0423
Extra
PDB:
ATOM 1 O3' C A 421 72.858 116.789 16.130 1.00 42.59 O
ATOM 2 P U A 422 71.828 116.646 17.356 1.00 47.13 P
ATOM 3 OP1 U A 422 71.481 118.016 17.823 1.00 46.84 O
ATOM 4 OP2 U A 422 72.395 115.671 18.318 1.00 47.12 O
ATOM 5 O5' U A 422 70.537 115.987 16.694 1.00 44.89 O
ATOM 6 C5' U A 422 69.923 116.585 15.542 1.00 44.60 C
ATOM 7 C4' U A 422 68.985 115.611 14.872 1.00 44.14 C
ATOM 8 O4' U A 422 69.724 114.465 14.379 1.00 42.60 O
ATOM 9 C3' U A 422 67.914 114.999 15.753 1.00 44.34 C
ATOM 10 O3' U A 422 66.788 115.840 15.894 1.00 45.37 O
ATOM 11 C2' U A 422 67.532 113.753 14.978 1.00 43.56 C
ATOM 12 O2' U A 422 66.648 114.071 13.923 1.00 43.00 O
ATOM 13 C1' U A 422 68.893 113.313 14.433 1.00 44.03 C
ATOM 14 N1 U A 422 69.549 112.285 15.259 1.00 45.00 N
ATOM 15 C2 U A 422 69.057 110.998 15.187 1.00 45.98 C
ATOM 16 O2 U A 422 68.112 110.691 14.482 1.00 47.19 O
ATOM 17 N3 U A 422 69.709 110.082 15.973 1.00 47.47 N
ATOM 18 C4 U A 422 70.778 110.315 16.813 1.00 48.53 C
ATOM 19 O4 U A 422 71.234 109.391 17.491 1.00 49.47 O
ATOM 20 C5 U A 422 71.230 111.669 16.833 1.00 47.62 C
ATOM 21 C6 U A 422 70.616 112.584 16.076 1.00 46.87 C
ATOM 22 P A A 423 65.848 115.679 17.180 1.00 49.51 P
ATOM 23 OP1 A A 423 66.183 116.806 18.093 1.00 49.69 O
ATOM 24 OP2 A A 423 65.957 114.274 17.668 1.00 46.68 O
ATOM 25 O5' A A 423 64.369 115.894 16.627 1.00 48.50 O
TER
ATOM 1 O3' U B 422 66.788 115.840 15.894 1.00 45.37 O
ATOM 2 P A B 423 65.848 115.679 17.180 1.00 49.51 P
ATOM 3 OP1 A B 423 66.183 116.806 18.093 1.00 49.69 O
ATOM 4 OP2 A B 423 65.957 114.274 17.668 1.00 46.68 O
ATOM 5 O5' A B 423 64.369 115.894 16.627 1.00 48.50 O
ATOM 6 C5' A B 423 63.986 117.109 15.957 1.00 49.26 C
ATOM 7 C4' A B 423 62.710 116.884 15.183 1.00 50.10 C
ATOM 8 O4' A B 423 62.920 115.812 14.232 1.00 49.73 O
ATOM 9 C3' A B 423 61.530 116.438 16.029 1.00 51.39 C
ATOM 10 O3' A B 423 60.824 117.583 16.490 1.00 54.66 O
ATOM 11 C2' A B 423 60.698 115.618 15.052 1.00 50.43 C
ATOM 12 O2' A B 423 59.907 116.440 14.220 1.00 51.71 O
ATOM 13 C1' A B 423 61.788 114.964 14.201 1.00 48.89 C
ATOM 14 N9 A B 423 62.227 113.632 14.619 1.00 47.92 N
ATOM 15 C8 A B 423 63.442 113.304 15.178 1.00 47.61 C
ATOM 16 N7 A B 423 63.600 112.020 15.382 1.00 47.50 N
ATOM 17 C5 A B 423 62.407 111.464 14.942 1.00 45.79 C
ATOM 18 C6 A B 423 61.961 110.141 14.869 1.00 43.81 C
ATOM 19 N6 A B 423 62.697 109.095 15.229 1.00 43.39 N
ATOM 20 N1 A B 423 60.722 109.924 14.397 1.00 43.73 N
ATOM 21 C2 A B 423 59.992 110.973 14.010 1.00 45.72 C
ATOM 22 N3 A B 423 60.305 112.265 14.012 1.00 46.34 N
ATOM 23 C4 A B 423 61.542 112.447 14.495 1.00 46.44 C
ATOM 24 P A B 424 59.980 117.512 17.852 1.00 56.59 P
ATOM 25 OP1 A B 424 59.123 118.731 17.876 1.00 57.32 O
ATOM 26 OP2 A B 424 60.911 117.246 18.984 1.00 56.69 O
ATOM 27 O5' A B 424 59.057 116.233 17.643 1.00 54.65 O
TER
ATOM 2 P U A 422 71.828 116.646 17.356 1.00 47.13 P
ATOM 3 OP1 U A 422 71.481 118.016 17.823 1.00 46.84 O
ATOM 4 OP2 U A 422 72.395 115.671 18.318 1.00 47.12 O
ATOM 5 O5' U A 422 70.537 115.987 16.694 1.00 44.89 O
ATOM 6 C5' U A 422 69.923 116.585 15.542 1.00 44.60 C
ATOM 7 C4' U A 422 68.985 115.611 14.872 1.00 44.14 C
ATOM 8 O4' U A 422 69.724 114.465 14.379 1.00 42.60 O
ATOM 9 C3' U A 422 67.914 114.999 15.753 1.00 44.34 C
ATOM 10 O3' U A 422 66.788 115.840 15.894 1.00 45.37 O
ATOM 11 C2' U A 422 67.532 113.753 14.978 1.00 43.56 C
ATOM 12 O2' U A 422 66.648 114.071 13.923 1.00 43.00 O
ATOM 13 C1' U A 422 68.893 113.313 14.433 1.00 44.03 C
ATOM 14 N1 U A 422 69.549 112.285 15.259 1.00 45.00 N
ATOM 15 C2 U A 422 69.057 110.998 15.187 1.00 45.98 C
ATOM 16 O2 U A 422 68.112 110.691 14.482 1.00 47.19 O
ATOM 17 N3 U A 422 69.709 110.082 15.973 1.00 47.47 N
ATOM 18 C4 U A 422 70.778 110.315 16.813 1.00 48.53 C
ATOM 19 O4 U A 422 71.234 109.391 17.491 1.00 49.47 O
ATOM 20 C5 U A 422 71.230 111.669 16.833 1.00 47.62 C
ATOM 21 C6 U A 422 70.616 112.584 16.076 1.00 46.87 C
ATOM 22 P A A 423 65.848 115.679 17.180 1.00 49.51 P
ATOM 23 OP1 A A 423 66.183 116.806 18.093 1.00 49.69 O
ATOM 24 OP2 A A 423 65.957 114.274 17.668 1.00 46.68 O
ATOM 25 O5' A A 423 64.369 115.894 16.627 1.00 48.50 O
TER
ATOM 1 O3' U B 422 66.788 115.840 15.894 1.00 45.37 O
ATOM 2 P A B 423 65.848 115.679 17.180 1.00 49.51 P
ATOM 3 OP1 A B 423 66.183 116.806 18.093 1.00 49.69 O
ATOM 4 OP2 A B 423 65.957 114.274 17.668 1.00 46.68 O
ATOM 5 O5' A B 423 64.369 115.894 16.627 1.00 48.50 O
ATOM 6 C5' A B 423 63.986 117.109 15.957 1.00 49.26 C
ATOM 7 C4' A B 423 62.710 116.884 15.183 1.00 50.10 C
ATOM 8 O4' A B 423 62.920 115.812 14.232 1.00 49.73 O
ATOM 9 C3' A B 423 61.530 116.438 16.029 1.00 51.39 C
ATOM 10 O3' A B 423 60.824 117.583 16.490 1.00 54.66 O
ATOM 11 C2' A B 423 60.698 115.618 15.052 1.00 50.43 C
ATOM 12 O2' A B 423 59.907 116.440 14.220 1.00 51.71 O
ATOM 13 C1' A B 423 61.788 114.964 14.201 1.00 48.89 C
ATOM 14 N9 A B 423 62.227 113.632 14.619 1.00 47.92 N
ATOM 15 C8 A B 423 63.442 113.304 15.178 1.00 47.61 C
ATOM 16 N7 A B 423 63.600 112.020 15.382 1.00 47.50 N
ATOM 17 C5 A B 423 62.407 111.464 14.942 1.00 45.79 C
ATOM 18 C6 A B 423 61.961 110.141 14.869 1.00 43.81 C
ATOM 19 N6 A B 423 62.697 109.095 15.229 1.00 43.39 N
ATOM 20 N1 A B 423 60.722 109.924 14.397 1.00 43.73 N
ATOM 21 C2 A B 423 59.992 110.973 14.010 1.00 45.72 C
ATOM 22 N3 A B 423 60.305 112.265 14.012 1.00 46.34 N
ATOM 23 C4 A B 423 61.542 112.447 14.495 1.00 46.44 C
ATOM 24 P A B 424 59.980 117.512 17.852 1.00 56.59 P
ATOM 25 OP1 A B 424 59.123 118.731 17.876 1.00 57.32 O
ATOM 26 OP2 A B 424 60.911 117.246 18.984 1.00 56.69 O
ATOM 27 O5' A B 424 59.057 116.233 17.643 1.00 54.65 O
TER
Atoms:
C4: (70.778,110.315,16.813)
N3: (69.709,110.082,15.973)
OP1: (71.481,118.016,17.823)
OP2: (72.395,115.671,18.318)
C2: (69.057,110.998,15.187)
C1': (68.893,113.313,14.433)
C3': (67.914,114.999,15.753)
O5': (70.537,115.987,16.694)
O4': (69.724,114.465,14.379)
C5': (69.923,116.585,15.542)
P: (71.828,116.646,17.356)
C4': (68.985,115.611,14.872)
C2': (67.532,113.753,14.978)
O2': (66.648,114.071,13.923)
N1: (69.549,112.285,15.259)
O4: (71.234,109.391,17.491)
O2: (68.112,110.691,14.482)
C6: (70.616,112.584,16.076)
C5: (71.230,111.669,16.833)
O3': (66.788,115.840,15.894)
N3: (69.709,110.082,15.973)
OP1: (71.481,118.016,17.823)
OP2: (72.395,115.671,18.318)
C2: (69.057,110.998,15.187)
C1': (68.893,113.313,14.433)
C3': (67.914,114.999,15.753)
O5': (70.537,115.987,16.694)
O4': (69.724,114.465,14.379)
C5': (69.923,116.585,15.542)
P: (71.828,116.646,17.356)
C4': (68.985,115.611,14.872)
C2': (67.532,113.753,14.978)
O2': (66.648,114.071,13.923)
N1: (69.549,112.285,15.259)
O4: (71.234,109.391,17.491)
O2: (68.112,110.691,14.482)
C6: (70.616,112.584,16.076)
C5: (71.230,111.669,16.833)
O3': (66.788,115.840,15.894)
OP1: (66.183,116.806,18.093)
OP2: (65.957,114.274,17.668)
C3': (61.530,116.438,16.029)
C1': (61.788,114.964,14.201)
C5': (63.986,117.109,15.957)
O4': (62.920,115.812,14.232)
C8: (63.442,113.304,15.178)
O2': (59.907,116.440,14.220)
C6: (61.961,110.141,14.869)
C5: (62.407,111.464,14.942)
C4: (61.542,112.447,14.495)
P: (65.848,115.679,17.180)
C4': (62.710,116.884,15.183)
C2': (60.698,115.618,15.052)
C2: (59.992,110.973,14.010)
N1: (60.722,109.924,14.397)
N3: (60.305,112.265,14.012)
N6: (62.697,109.095,15.229)
N7: (63.600,112.020,15.382)
N9: (62.227,113.632,14.619)
O5': (64.369,115.894,16.627)
O3': (60.824,117.583,16.490)
OP2: (65.957,114.274,17.668)
C3': (61.530,116.438,16.029)
C1': (61.788,114.964,14.201)
C5': (63.986,117.109,15.957)
O4': (62.920,115.812,14.232)
C8: (63.442,113.304,15.178)
O2': (59.907,116.440,14.220)
C6: (61.961,110.141,14.869)
C5: (62.407,111.464,14.942)
C4: (61.542,112.447,14.495)
P: (65.848,115.679,17.180)
C4': (62.710,116.884,15.183)
C2': (60.698,115.618,15.052)
C2: (59.992,110.973,14.010)
N1: (60.722,109.924,14.397)
N3: (60.305,112.265,14.012)
N6: (62.697,109.095,15.229)
N7: (63.600,112.020,15.382)
N9: (62.227,113.632,14.619)
O5': (64.369,115.894,16.627)
O3': (60.824,117.583,16.490)
Image (generated by PyMOL):