ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J01:A1629:A1630

Extra

PDB:
ATOM 1 O3' G A1628 8.060 87.308 124.284 1.00 20.42 O
ATOM 2 P U A1629 7.331 88.442 123.418 1.00 36.71 P
ATOM 3 OP1 U A1629 7.056 87.905 122.058 1.00 39.24 O
ATOM 4 OP2 U A1629 8.097 89.707 123.561 1.00 39.24 O
ATOM 5 O5' U A1629 5.937 88.600 124.166 1.00 32.33 O
ATOM 6 C5' U A1629 5.180 89.793 124.012 1.00 32.33 C
ATOM 7 C4' U A1629 4.434 90.105 125.274 1.00 32.33 C
ATOM 8 O4' U A1629 5.335 90.074 126.409 1.00 32.33 O
ATOM 9 C3' U A1629 3.863 91.508 125.283 1.00 32.33 C
ATOM 10 O3' U A1629 2.634 91.558 124.607 1.00 32.33 O
ATOM 11 C2' U A1629 3.751 91.812 126.762 1.00 32.33 C
ATOM 12 O2' U A1629 2.589 91.248 127.333 1.00 32.33 O
ATOM 13 C1' U A1629 5.007 91.124 127.298 1.00 32.33 C
ATOM 14 N1 U A1629 6.126 92.072 127.309 1.00 0.79 N
ATOM 15 C2 U A1629 6.080 93.082 128.241 1.00 0.79 C
ATOM 16 O2 U A1629 5.156 93.213 129.013 1.00 0.79 O
ATOM 17 N3 U A1629 7.145 93.941 128.221 1.00 0.79 N
ATOM 18 C4 U A1629 8.227 93.902 127.353 1.00 0.79 C
ATOM 19 O4 U A1629 9.103 94.777 127.428 1.00 0.79 O
ATOM 20 C5 U A1629 8.196 92.827 126.404 1.00 0.79 C
ATOM 21 C6 U A1629 7.174 91.968 126.420 1.00 0.79 C
ATOM 22 P A A1630 2.596 92.142 123.121 1.00 33.21 P
ATOM 23 OP1 A A1630 3.077 91.059 122.233 1.00 62.55 O
ATOM 24 OP2 A A1630 3.291 93.456 123.109 1.00 62.55 O
ATOM 25 O5' A A1630 1.041 92.349 122.864 1.00 14.99 O
TER

ATOM 1 O3' U B1629 2.634 91.558 124.607 1.00 32.33 O
ATOM 2 P A B1630 2.596 92.142 123.121 1.00 33.21 P
ATOM 3 OP1 A B1630 3.077 91.059 122.233 1.00 62.55 O
ATOM 4 OP2 A B1630 3.291 93.456 123.109 1.00 62.55 O
ATOM 5 O5' A B1630 1.041 92.349 122.864 1.00 14.99 O
ATOM 6 C5' A B1630 0.209 91.234 122.552 1.00 14.99 C
ATOM 7 C4' A B1630 -1.190 91.475 123.043 1.00 14.99 C
ATOM 8 O4' A B1630 -1.184 91.532 124.488 1.00 14.99 O
ATOM 9 C3' A B1630 -1.826 92.786 122.609 1.00 14.99 C
ATOM 10 O3' A B1630 -2.389 92.719 121.307 1.00 14.99 O
ATOM 11 C2' A B1630 -2.871 93.009 123.687 1.00 14.99 C
ATOM 12 O2' A B1630 -4.056 92.270 123.475 1.00 14.99 O
ATOM 13 C1' A B1630 -2.141 92.479 124.924 1.00 14.99 C
ATOM 14 N9 A B1630 -1.433 93.543 125.638 1.00 18.02 N
ATOM 15 C8 A B1630 -0.083 93.779 125.694 1.00 18.02 C
ATOM 16 N7 A B1630 0.237 94.828 126.408 1.00 18.02 N
ATOM 17 C5 A B1630 -0.981 95.311 126.856 1.00 18.02 C
ATOM 18 C6 A B1630 -1.321 96.402 127.662 1.00 18.02 C
ATOM 19 N6 A B1630 -0.433 97.218 128.205 1.00 18.02 N
ATOM 20 N1 A B1630 -2.625 96.626 127.904 1.00 18.02 N
ATOM 21 C2 A B1630 -3.523 95.786 127.374 1.00 18.02 C
ATOM 22 N3 A B1630 -3.324 94.711 126.614 1.00 18.02 N
ATOM 23 C4 A B1630 -2.015 94.531 126.389 1.00 18.02 C
ATOM 24 P A B1631 -2.479 94.052 120.406 1.00 14.23 P
ATOM 25 OP1 A B1631 -2.628 93.588 118.997 1.00 42.29 O
ATOM 26 OP2 A B1631 -1.372 94.971 120.759 1.00 42.29 O
ATOM 27 O5' A B1631 -3.862 94.682 120.851 1.00 8.09 O
TER

Atoms:
C4: (8.227,93.902,127.353)
N3: (7.145,93.941,128.221)
OP1: (7.056,87.905,122.058)
OP2: (8.097,89.707,123.561)
C2: (6.080,93.082,128.241)
C1': (5.007,91.124,127.298)
C3': (3.863,91.508,125.283)
O5': (5.937,88.600,124.166)
O4': (5.335,90.074,126.409)
C5': (5.180,89.793,124.012)
P: (7.331,88.442,123.418)
C4': (4.434,90.105,125.274)
C2': (3.751,91.812,126.762)
O2': (2.589,91.248,127.333)
N1: (6.126,92.072,127.309)
O4: (9.103,94.777,127.428)
O2: (5.156,93.213,129.013)
C6: (7.174,91.968,126.420)
C5: (8.196,92.827,126.404)
O3': (2.634,91.558,124.607)
OP1: (3.077,91.059,122.233)
OP2: (3.291,93.456,123.109)
C3': (-1.826,92.786,122.609)
C1': (-2.141,92.479,124.924)
C5': (0.209,91.234,122.552)
O4': (-1.184,91.532,124.488)
C8: (-0.083,93.779,125.694)
O2': (-4.056,92.270,123.475)
C6: (-1.321,96.402,127.662)
C5: (-0.981,95.311,126.856)
C4: (-2.015,94.531,126.389)
P: (2.596,92.142,123.121)
C4': (-1.190,91.475,123.043)
C2': (-2.871,93.009,123.687)
C2: (-3.523,95.786,127.374)
N1: (-2.625,96.626,127.904)
N3: (-3.324,94.711,126.614)
N6: (-0.433,97.218,128.205)
N7: (0.237,94.828,126.408)
N9: (-1.433,93.543,125.638)
O5': (1.041,92.349,122.864)
O3': (-2.389,92.719,121.307)
Image (generated by PyMOL):
PyMOL image
show in jmol