Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:A1224:A1225
Extra
PDB:
ATOM 1 O3' A A1223 -144.533 6.510 -3.912 1.00 30.57 O
ATOM 2 P C A1224 -144.820 6.010 -2.414 1.00 30.29 P
ATOM 3 OP1 C A1224 -145.317 4.616 -2.529 1.00 30.29 O
ATOM 4 OP2 C A1224 -145.687 7.038 -1.760 1.00 30.29 O
ATOM 5 O5' C A1224 -143.370 6.020 -1.746 1.00 30.29 O
ATOM 6 C5' C A1224 -142.550 4.859 -1.766 1.00 30.29 C
ATOM 7 C4' C A1224 -141.239 5.080 -1.054 1.00 30.29 C
ATOM 8 O4' C A1224 -140.365 5.861 -1.905 1.00 30.29 O
ATOM 9 C3' C A1224 -141.328 5.827 0.279 1.00 30.29 C
ATOM 10 O3' C A1224 -140.363 5.315 1.194 1.00 30.29 O
ATOM 11 C2' C A1224 -140.936 7.253 -0.095 1.00 30.29 C
ATOM 12 O2' C A1224 -140.375 7.998 0.965 1.00 30.29 O
ATOM 13 C1' C A1224 -139.921 7.016 -1.215 1.00 30.29 C
ATOM 14 N1 C A1224 -139.829 8.126 -2.199 1.00 30.47 N
ATOM 15 C2 C A1224 -138.648 8.316 -2.951 1.00 30.47 C
ATOM 16 O2 C A1224 -137.674 7.560 -2.759 1.00 30.47 O
ATOM 17 N3 C A1224 -138.590 9.323 -3.869 1.00 30.47 N
ATOM 18 C4 C A1224 -139.649 10.129 -4.050 1.00 30.47 C
ATOM 19 N4 C A1224 -139.600 11.128 -4.953 1.00 30.47 N
ATOM 20 C5 C A1224 -140.847 9.937 -3.295 1.00 30.47 C
ATOM 21 C6 C A1224 -140.901 8.943 -2.401 1.00 30.47 C
ATOM 22 P A A1225 -140.379 3.774 1.658 1.00 27.25 P
ATOM 23 OP1 A A1225 -140.345 2.934 0.427 1.00 27.25 O
ATOM 24 OP2 A A1225 -141.504 3.602 2.610 1.00 27.25 O
ATOM 25 O5' A A1225 -139.000 3.655 2.434 1.00 27.25 O
TER
ATOM 1 O3' C B1224 -140.363 5.315 1.194 1.00 30.29 O
ATOM 2 P A B1225 -140.379 3.774 1.658 1.00 27.25 P
ATOM 3 OP1 A B1225 -140.345 2.934 0.427 1.00 27.25 O
ATOM 4 OP2 A B1225 -141.504 3.602 2.610 1.00 27.25 O
ATOM 5 O5' A B1225 -139.000 3.655 2.434 1.00 27.25 O
ATOM 6 C5' A B1225 -137.859 3.132 1.788 1.00 27.25 C
ATOM 7 C4' A B1225 -136.727 2.957 2.751 1.00 27.25 C
ATOM 8 O4' A B1225 -135.632 2.266 2.089 1.00 27.25 O
ATOM 9 C3' A B1225 -136.124 4.247 3.275 1.00 27.25 C
ATOM 10 O3' A B1225 -136.791 4.726 4.426 1.00 27.25 O
ATOM 11 C2' A B1225 -134.667 3.865 3.496 1.00 27.25 C
ATOM 12 O2' A B1225 -134.525 3.087 4.673 1.00 27.25 O
ATOM 13 C1' A B1225 -134.430 2.955 2.299 1.00 27.25 C
ATOM 14 N9 A B1225 -134.138 3.706 1.058 1.00 28.00 N
ATOM 15 C8 A B1225 -134.987 4.570 0.404 1.00 28.00 C
ATOM 16 N7 A B1225 -134.524 5.074 -0.710 1.00 28.00 N
ATOM 17 C5 A B1225 -133.292 4.477 -0.836 1.00 28.00 C
ATOM 18 C6 A B1225 -132.298 4.597 -1.831 1.00 28.00 C
ATOM 19 N6 A B1225 -132.425 5.385 -2.905 1.00 28.00 N
ATOM 20 N1 A B1225 -131.158 3.862 -1.665 1.00 28.00 N
ATOM 21 C2 A B1225 -131.041 3.071 -0.574 1.00 28.00 C
ATOM 22 N3 A B1225 -131.921 2.879 0.431 1.00 28.00 N
ATOM 23 C4 A B1225 -133.040 3.619 0.238 1.00 28.00 C
ATOM 24 P C B1226 -136.040 5.667 5.488 1.00 30.58 P
ATOM 25 OP1 C B1226 -135.302 4.781 6.423 1.00 30.58 O
ATOM 26 OP2 C B1226 -137.063 6.584 6.045 1.00 30.58 O
ATOM 27 O5' C B1226 -135.010 6.483 4.586 1.00 30.58 O
TER
ATOM 2 P C A1224 -144.820 6.010 -2.414 1.00 30.29 P
ATOM 3 OP1 C A1224 -145.317 4.616 -2.529 1.00 30.29 O
ATOM 4 OP2 C A1224 -145.687 7.038 -1.760 1.00 30.29 O
ATOM 5 O5' C A1224 -143.370 6.020 -1.746 1.00 30.29 O
ATOM 6 C5' C A1224 -142.550 4.859 -1.766 1.00 30.29 C
ATOM 7 C4' C A1224 -141.239 5.080 -1.054 1.00 30.29 C
ATOM 8 O4' C A1224 -140.365 5.861 -1.905 1.00 30.29 O
ATOM 9 C3' C A1224 -141.328 5.827 0.279 1.00 30.29 C
ATOM 10 O3' C A1224 -140.363 5.315 1.194 1.00 30.29 O
ATOM 11 C2' C A1224 -140.936 7.253 -0.095 1.00 30.29 C
ATOM 12 O2' C A1224 -140.375 7.998 0.965 1.00 30.29 O
ATOM 13 C1' C A1224 -139.921 7.016 -1.215 1.00 30.29 C
ATOM 14 N1 C A1224 -139.829 8.126 -2.199 1.00 30.47 N
ATOM 15 C2 C A1224 -138.648 8.316 -2.951 1.00 30.47 C
ATOM 16 O2 C A1224 -137.674 7.560 -2.759 1.00 30.47 O
ATOM 17 N3 C A1224 -138.590 9.323 -3.869 1.00 30.47 N
ATOM 18 C4 C A1224 -139.649 10.129 -4.050 1.00 30.47 C
ATOM 19 N4 C A1224 -139.600 11.128 -4.953 1.00 30.47 N
ATOM 20 C5 C A1224 -140.847 9.937 -3.295 1.00 30.47 C
ATOM 21 C6 C A1224 -140.901 8.943 -2.401 1.00 30.47 C
ATOM 22 P A A1225 -140.379 3.774 1.658 1.00 27.25 P
ATOM 23 OP1 A A1225 -140.345 2.934 0.427 1.00 27.25 O
ATOM 24 OP2 A A1225 -141.504 3.602 2.610 1.00 27.25 O
ATOM 25 O5' A A1225 -139.000 3.655 2.434 1.00 27.25 O
TER
ATOM 1 O3' C B1224 -140.363 5.315 1.194 1.00 30.29 O
ATOM 2 P A B1225 -140.379 3.774 1.658 1.00 27.25 P
ATOM 3 OP1 A B1225 -140.345 2.934 0.427 1.00 27.25 O
ATOM 4 OP2 A B1225 -141.504 3.602 2.610 1.00 27.25 O
ATOM 5 O5' A B1225 -139.000 3.655 2.434 1.00 27.25 O
ATOM 6 C5' A B1225 -137.859 3.132 1.788 1.00 27.25 C
ATOM 7 C4' A B1225 -136.727 2.957 2.751 1.00 27.25 C
ATOM 8 O4' A B1225 -135.632 2.266 2.089 1.00 27.25 O
ATOM 9 C3' A B1225 -136.124 4.247 3.275 1.00 27.25 C
ATOM 10 O3' A B1225 -136.791 4.726 4.426 1.00 27.25 O
ATOM 11 C2' A B1225 -134.667 3.865 3.496 1.00 27.25 C
ATOM 12 O2' A B1225 -134.525 3.087 4.673 1.00 27.25 O
ATOM 13 C1' A B1225 -134.430 2.955 2.299 1.00 27.25 C
ATOM 14 N9 A B1225 -134.138 3.706 1.058 1.00 28.00 N
ATOM 15 C8 A B1225 -134.987 4.570 0.404 1.00 28.00 C
ATOM 16 N7 A B1225 -134.524 5.074 -0.710 1.00 28.00 N
ATOM 17 C5 A B1225 -133.292 4.477 -0.836 1.00 28.00 C
ATOM 18 C6 A B1225 -132.298 4.597 -1.831 1.00 28.00 C
ATOM 19 N6 A B1225 -132.425 5.385 -2.905 1.00 28.00 N
ATOM 20 N1 A B1225 -131.158 3.862 -1.665 1.00 28.00 N
ATOM 21 C2 A B1225 -131.041 3.071 -0.574 1.00 28.00 C
ATOM 22 N3 A B1225 -131.921 2.879 0.431 1.00 28.00 N
ATOM 23 C4 A B1225 -133.040 3.619 0.238 1.00 28.00 C
ATOM 24 P C B1226 -136.040 5.667 5.488 1.00 30.58 P
ATOM 25 OP1 C B1226 -135.302 4.781 6.423 1.00 30.58 O
ATOM 26 OP2 C B1226 -137.063 6.584 6.045 1.00 30.58 O
ATOM 27 O5' C B1226 -135.010 6.483 4.586 1.00 30.58 O
TER
Atoms:
C2: (-138.648,8.316,-2.951)
OP1: (-145.317,4.616,-2.529)
OP2: (-145.687,7.038,-1.760)
C4: (-139.649,10.129,-4.050)
O5': (-143.370,6.020,-1.746)
C3': (-141.328,5.827,0.279)
C1': (-139.921,7.016,-1.215)
O4': (-140.365,5.861,-1.905)
C5': (-142.550,4.859,-1.766)
P: (-144.820,6.010,-2.414)
O2: (-137.674,7.560,-2.759)
C4': (-141.239,5.080,-1.054)
C2': (-140.936,7.253,-0.095)
O2': (-140.375,7.998,0.965)
N1: (-139.829,8.126,-2.199)
N3: (-138.590,9.323,-3.869)
N4: (-139.600,11.128,-4.953)
C6: (-140.901,8.943,-2.401)
C5: (-140.847,9.937,-3.295)
O3': (-140.363,5.315,1.194)
OP1: (-145.317,4.616,-2.529)
OP2: (-145.687,7.038,-1.760)
C4: (-139.649,10.129,-4.050)
O5': (-143.370,6.020,-1.746)
C3': (-141.328,5.827,0.279)
C1': (-139.921,7.016,-1.215)
O4': (-140.365,5.861,-1.905)
C5': (-142.550,4.859,-1.766)
P: (-144.820,6.010,-2.414)
O2: (-137.674,7.560,-2.759)
C4': (-141.239,5.080,-1.054)
C2': (-140.936,7.253,-0.095)
O2': (-140.375,7.998,0.965)
N1: (-139.829,8.126,-2.199)
N3: (-138.590,9.323,-3.869)
N4: (-139.600,11.128,-4.953)
C6: (-140.901,8.943,-2.401)
C5: (-140.847,9.937,-3.295)
O3': (-140.363,5.315,1.194)
OP1: (-140.345,2.934,0.427)
OP2: (-141.504,3.602,2.610)
C3': (-136.124,4.247,3.275)
C1': (-134.430,2.955,2.299)
C5': (-137.859,3.132,1.788)
O4': (-135.632,2.266,2.089)
C8: (-134.987,4.570,0.404)
O2': (-134.525,3.087,4.673)
C6: (-132.298,4.597,-1.831)
C5: (-133.292,4.477,-0.836)
C4: (-133.040,3.619,0.238)
P: (-140.379,3.774,1.658)
C4': (-136.727,2.957,2.751)
C2': (-134.667,3.865,3.496)
C2: (-131.041,3.071,-0.574)
N1: (-131.158,3.862,-1.665)
N3: (-131.921,2.879,0.431)
N6: (-132.425,5.385,-2.905)
N7: (-134.524,5.074,-0.710)
N9: (-134.138,3.706,1.058)
O5': (-139.000,3.655,2.434)
O3': (-136.791,4.726,4.426)
OP2: (-141.504,3.602,2.610)
C3': (-136.124,4.247,3.275)
C1': (-134.430,2.955,2.299)
C5': (-137.859,3.132,1.788)
O4': (-135.632,2.266,2.089)
C8: (-134.987,4.570,0.404)
O2': (-134.525,3.087,4.673)
C6: (-132.298,4.597,-1.831)
C5: (-133.292,4.477,-0.836)
C4: (-133.040,3.619,0.238)
P: (-140.379,3.774,1.658)
C4': (-136.727,2.957,2.751)
C2': (-134.667,3.865,3.496)
C2: (-131.041,3.071,-0.574)
N1: (-131.158,3.862,-1.665)
N3: (-131.921,2.879,0.431)
N6: (-132.425,5.385,-2.905)
N7: (-134.524,5.074,-0.710)
N9: (-134.138,3.706,1.058)
O5': (-139.000,3.655,2.434)
O3': (-136.791,4.726,4.426)
Image (generated by PyMOL):